RNA–Protein interactions for RNA: ENST00000228307.11

PXN-201, Transcript of paxillin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PXN, Length 3,785 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PXN-201ENST00000228307 UBN2Q6ZU65 1347 aa17.77■□□□□ 0.43
PXN-201ENST00000228307 H2AFXP16104 143 aaPredicted RBP17.77■□□□□ 0.43
PXN-201ENST00000228307 BRD3Q15059 726 aa17.77■□□□□ 0.43
PXN-201ENST00000228307 TTC31Q49AM3 519 aaPredicted RBP17.77■□□□□ 0.43
PXN-201ENST00000228307 TPTE2Q6XPS3 522 aa17.77■□□□□ 0.43
PXN-201ENST00000228307 NOSTRINQ8IVI9 506 aa17.77■□□□□ 0.43
PXN-201ENST00000228307 FAM107BQ9H098 131 aa17.77■□□□□ 0.43
PXN-201ENST00000228307 CASP1P29466 404 aa17.76■□□□□ 0.43
PXN-201ENST00000228307 CASP14P31944 242 aa17.76■□□□□ 0.43
PXN-201ENST00000228307 SPA17Q15506 151 aa17.76■□□□□ 0.43
PXN-201ENST00000228307 CCDC122Q5T0U0 273 aa17.76■□□□□ 0.43
PXN-201ENST00000228307 MSL1Q68DK7 614 aa17.76■□□□□ 0.43
PXN-201ENST00000228307 APOA5Q6Q788 366 aa17.76■□□□□ 0.43
PXN-201ENST00000228307 LRP10Q7Z4F1 713 aa17.76■□□□□ 0.43
PXN-201ENST00000228307 SRGAP1Q7Z6B7 1085 aa17.76■□□□□ 0.43
PXN-201ENST00000228307 RPGRQ92834 1020 aaKnown RBP17.76■□□□□ 0.43
PXN-201ENST00000228307 TRIM47Q96LD4 638 aa17.76■□□□□ 0.43
PXN-201ENST00000228307 CYP2D7A0A087X1C5 515 aa17.76■□□□□ 0.43
PXN-201ENST00000228307 NR5A1Q13285 461 aa17.76■□□□□ 0.43
PXN-201ENST00000228307 ZKSCAN7Q9P0L1 754 aaPredicted RBP17.76■□□□□ 0.43
PXN-201ENST00000228307 SHTN1A0MZ66 631 aa17.76■□□□□ 0.43
PXN-201ENST00000228307 ZMYND10O75800 440 aa17.76■□□□□ 0.43
PXN-201ENST00000228307 SHC4Q6S5L8 630 aa17.76■□□□□ 0.43
PXN-201ENST00000228307 ACRBPQ8NEB7 543 aa17.76■□□□□ 0.43
PXN-201ENST00000228307 MAN1B1Q9UKM7 699 aa17.76■□□□□ 0.43
PXN-201ENST00000228307 MYO1CO00159 1063 aa17.75■□□□□ 0.43
PXN-201ENST00000228307 ENC1O14682 589 aa17.75■□□□□ 0.43
PXN-201ENST00000228307 TRIM66O15016 1216 aa17.75■□□□□ 0.43
PXN-201ENST00000228307 RBL2Q08999 1139 aa17.75■□□□□ 0.43
PXN-201ENST00000228307 RASGRF1Q13972 1273 aa17.75■□□□□ 0.43
PXN-201ENST00000228307 AATFQ9NY61 560 aaKnown RBP eCLIP17.75■□□□□ 0.43
PXN-201ENST00000228307 CCDC151A5D8V7 595 aa17.75■□□□□ 0.43
PXN-201ENST00000228307 UQCRFS1P1P0C7P4 283 aa17.75■□□□□ 0.43
PXN-201ENST00000228307 CASP7P55210 303 aa17.75■□□□□ 0.43
PXN-201ENST00000228307 NKX1-1Q15270 411 aaPredicted RBP17.75■□□□□ 0.43
PXN-201ENST00000228307 TRAPPC3LQ5T215 181 aa17.75■□□□□ 0.43
PXN-201ENST00000228307 IPO4Q8TEX9 1081 aaKnown RBP17.75■□□□□ 0.43
PXN-201ENST00000228307 CDC23Q9UJX2 597 aa17.75■□□□□ 0.43
PXN-201ENST00000228307 RRP15Q9Y3B9 282 aaKnown RBP17.75■□□□□ 0.43
PXN-201ENST00000228307 GOLGB1Q14789 3259 aaKnown RBP17.75■□□□□ 0.43
PXN-201ENST00000228307 MACROD2A1Z1Q3 448 aa17.75■□□□□ 0.43
PXN-201ENST00000228307 MNAT1P51948 309 aa17.75■□□□□ 0.43
PXN-201ENST00000228307 CELF1Q92879 486 aaKnown RBP17.75■□□□□ 0.43
PXN-201ENST00000228307 PSMB7Q99436 277 aa17.75■□□□□ 0.43
PXN-201ENST00000228307 SPATA31A1Q5TZJ5 1347 aa17.75■□□□□ 0.43
PXN-201ENST00000228307 USP5P45974 858 aa17.74■□□□□ 0.43
PXN-201ENST00000228307 MTIF2P46199 727 aaKnown RBP17.74■□□□□ 0.43
PXN-201ENST00000228307 TBC1D9BQ66K14 1250 aa17.74■□□□□ 0.43
PXN-201ENST00000228307 VPS54Q9P1Q0 977 aa17.74■□□□□ 0.43
PXN-201ENST00000228307 PARP3Q9Y6F1 533 aa17.74■□□□□ 0.43
PXN-201ENST00000228307 GOLGA5Q8TBA6 731 aa17.74■□□□□ 0.43
PXN-201ENST00000228307 TMEM87BQ96K49 555 aa17.74■□□□□ 0.43
PXN-201ENST00000228307 LUC7L2Q9Y383 392 aaKnown RBP17.74■□□□□ 0.43
PXN-201ENST00000228307 ADAMTSL3P82987 1691 aa17.74■□□□□ 0.43
PXN-201ENST00000228307 UTYO14607 1347 aa17.74■□□□□ 0.43
PXN-201ENST00000228307 ZMYM6O95789 1325 aa17.74■□□□□ 0.43
PXN-201ENST00000228307 PATL2C9JE40 543 aaKnown RBP17.74■□□□□ 0.43
PXN-201ENST00000228307 MCM7P33993 719 aa17.74■□□□□ 0.43
PXN-201ENST00000228307 ACTN2P35609 894 aa17.74■□□□□ 0.43
PXN-201ENST00000228307 CATIPQ7Z7H3 387 aa17.74■□□□□ 0.43
PXN-201ENST00000228307 ABCB6Q9NP58 842 aa17.74■□□□□ 0.43
PXN-201ENST00000228307 TMEM51Q9NW97 253 aa17.74■□□□□ 0.43
PXN-201ENST00000228307 FCHSD1Q86WN1 690 aa17.73■□□□□ 0.43
PXN-201ENST00000228307 IQCA1Q86XH1 822 aa17.73■□□□□ 0.43
PXN-201ENST00000228307 CTCFLQ8NI51 663 aaPredicted RBP17.73■□□□□ 0.43
PXN-201ENST00000228307 CDCA7Q9BWT1 371 aaPredicted RBP17.73■□□□□ 0.43
PXN-201ENST00000228307 KRT23Q9C075 422 aa17.73■□□□□ 0.43
PXN-201ENST00000228307 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.73■□□□□ 0.43
PXN-201ENST00000228307 TTF2Q9UNY4 1162 aaKnown RBP17.73■□□□□ 0.43
PXN-201ENST00000228307 RGPD5Q99666 1765 aa17.73■□□□□ 0.43
PXN-201ENST00000228307 TEX33O43247 280 aa17.73■□□□□ 0.43
PXN-201ENST00000228307 CCDC96Q2M329 555 aa17.73■□□□□ 0.43
PXN-201ENST00000228307 IQCEQ6IPM2 695 aa17.73■□□□□ 0.43
PXN-201ENST00000228307 BPIFA3Q9BQP9 254 aa17.73■□□□□ 0.43
PXN-201ENST00000228307 V9GY48 417 aaPredicted RBP17.73■□□□□ 0.43
PXN-201ENST00000228307 ATP8B1O43520 1251 aa17.72■□□□□ 0.43
PXN-201ENST00000228307 PPP6R2O75170 966 aa17.72■□□□□ 0.43
PXN-201ENST00000228307 MCM3P25205 808 aa17.72■□□□□ 0.43
PXN-201ENST00000228307 RBM5P52756 815 aaKnown RBP eCLIP17.72■□□□□ 0.43
PXN-201ENST00000228307 AFAP1L1Q8TED9 768 aa17.72■□□□□ 0.43
PXN-201ENST00000228307 MROH7-TTC4A0A0A0MT08 1334 aa17.72■□□□□ 0.43
PXN-201ENST00000228307 DYNLL1P63167 89 aaKnown RBP17.72■□□□□ 0.43
PXN-201ENST00000228307 RNF41Q9H4P4 317 aaPredicted RBP17.72■□□□□ 0.43
PXN-201ENST00000228307 PXDNLA1KZ92 1463 aa17.72■□□□□ 0.43
PXN-201ENST00000228307 UBA7P41226 1012 aa17.71■□□□□ 0.43
PXN-201ENST00000228307 PARP10Q53GL7 1025 aa17.71■□□□□ 0.43
PXN-201ENST00000228307 METTL16Q86W50 562 aaKnown RBP17.71■□□□□ 0.43
PXN-201ENST00000228307 SUGCTQ9HAC7 445 aa17.71■□□□□ 0.43
PXN-201ENST00000228307 RIPOR2Q9Y4F9 1068 aa17.71■□□□□ 0.43
PXN-201ENST00000228307 DCCP43146 1447 aa17.71■□□□□ 0.43
PXN-201ENST00000228307 ERCC3P19447 782 aa17.71■□□□□ 0.43
PXN-201ENST00000228307 RPS8P62241 208 aaKnown RBP17.71■□□□□ 0.43
PXN-201ENST00000228307 PDE4BQ07343 736 aa17.71■□□□□ 0.43
PXN-201ENST00000228307 SPAG1Q07617 926 aa17.71■□□□□ 0.43
PXN-201ENST00000228307 RNF187Q5TA31 235 aaPredicted RBP17.71■□□□□ 0.43
PXN-201ENST00000228307 LINC00116Q8NCU8 138 aa17.71■□□□□ 0.43
PXN-201ENST00000228307 ZNF622Q969S3 477 aaKnown RBP eCLIP17.71■□□□□ 0.43
PXN-201ENST00000228307 CSRNP2Q9H175 543 aa17.71■□□□□ 0.43
PXN-201ENST00000228307 CNNM2Q9H8M5 875 aa17.71■□□□□ 0.43
PXN-201ENST00000228307 QTRT2Q9H974 415 aaKnown RBP17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms