RNA–Protein interactions for RNA: ENST00000618148.1

VPS45-213, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 2

Gene VPS45, Length 1,670 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-213ENST00000618148 TMOD2Q9NZR1 351 aa8.86□□□□□ -0.99
VPS45-213ENST00000618148 NEDD4P46934 1319 aa8.86□□□□□ -0.99
VPS45-213ENST00000618148 CASTP20810 708 aaKnown RBP8.85□□□□□ -0.99
VPS45-213ENST00000618148 RPS6KB1P23443 525 aa8.85□□□□□ -0.99
VPS45-213ENST00000618148 CACNB3P54284 484 aa8.85□□□□□ -0.99
VPS45-213ENST00000618148 EXOSC10Q01780 885 aaKnown RBP8.85□□□□□ -0.99
VPS45-213ENST00000618148 MAP3K10Q02779 954 aa8.85□□□□□ -0.99
VPS45-213ENST00000618148 TNFAIP1Q13829 316 aa8.85□□□□□ -0.99
VPS45-213ENST00000618148 TBC1D10BQ4KMP7 808 aaPredicted RBP8.85□□□□□ -0.99
VPS45-213ENST00000618148 C16orf86Q6ZW13 317 aa8.85□□□□□ -0.99
VPS45-213ENST00000618148 RUFY3Q7L099 469 aa8.85□□□□□ -0.99
VPS45-213ENST00000618148 TTC6Q86TZ1 520 aa8.85□□□□□ -0.99
VPS45-213ENST00000618148 ZFPM1Q8IX07 1006 aa8.85□□□□□ -0.99
VPS45-213ENST00000618148 AMOTL1Q8IY63 956 aa8.85□□□□□ -0.99
VPS45-213ENST00000618148 CLRN2A0PK11 232 aa8.85□□□□□ -0.99
VPS45-213ENST00000618148 MINDY4BA8MYZ0 360 aa8.85□□□□□ -0.99
VPS45-213ENST00000618148 POTECB2RU33 542 aa8.85□□□□□ -0.99
VPS45-213ENST00000618148 SLC3A2P08195 630 aaKnown RBP8.85□□□□□ -0.99
VPS45-213ENST00000618148 LMOD1P29536 600 aaPredicted RBP8.85□□□□□ -0.99
VPS45-213ENST00000618148 ANTXR2P58335 489 aa8.85□□□□□ -0.99
VPS45-213ENST00000618148 CTDSPL2Q05D32 466 aa8.85□□□□□ -0.99
VPS45-213ENST00000618148 PICALMQ13492 652 aa8.85□□□□□ -0.99
VPS45-213ENST00000618148 BLOC1S2Q6QNY1 142 aa8.85□□□□□ -0.99
VPS45-213ENST00000618148 MFSD6Q6ZSS7 791 aa8.85□□□□□ -0.99
VPS45-213ENST00000618148 DHX32Q7L7V1 743 aaKnown RBP8.85□□□□□ -0.99
VPS45-213ENST00000618148 NCOA7Q8NI08 942 aa8.85□□□□□ -0.99
VPS45-213ENST00000618148 NKX2-3Q8TAU0 364 aa8.85□□□□□ -0.99
VPS45-213ENST00000618148 ZC3H15Q8WU90 426 aaKnown RBP8.85□□□□□ -0.99
VPS45-213ENST00000618148 TEPSINQ96N21 525 aa8.85□□□□□ -0.99
VPS45-213ENST00000618148 UPF3BQ9BZI7 483 aaKnown RBP8.85□□□□□ -0.99
VPS45-213ENST00000618148 KRT23Q9C075 422 aa8.85□□□□□ -0.99
VPS45-213ENST00000618148 SAP30BPQ9UHR5 308 aaKnown RBP8.85□□□□□ -0.99
VPS45-213ENST00000618148 HACL1Q9UJ83 578 aa8.85□□□□□ -0.99
VPS45-213ENST00000618148 CYP46A1Q9Y6A2 500 aa8.85□□□□□ -0.99
VPS45-213ENST00000618148 PLIN4Q96Q06 1357 aa8.84□□□□□ -0.99
VPS45-213ENST00000618148 IQCA1LA6NCM1 817 aa8.84□□□□□ -0.99
VPS45-213ENST00000618148 DDTLA6NHG4 134 aaPredicted RBP8.84□□□□□ -0.99
VPS45-213ENST00000618148 POLR3DP05423 398 aaPredicted RBP8.84□□□□□ -0.99
VPS45-213ENST00000618148 HLA-DOAP06340 250 aa8.84□□□□□ -0.99
VPS45-213ENST00000618148 NEK4P51957 841 aa8.84□□□□□ -0.99
VPS45-213ENST00000618148 EVCP57679 992 aa8.84□□□□□ -0.99
VPS45-213ENST00000618148 PDE4BQ07343 736 aa8.84□□□□□ -0.99
VPS45-213ENST00000618148 USP50Q70EL3 339 aaPredicted RBP8.84□□□□□ -0.99
VPS45-213ENST00000618148 APOBEC3FQ8IUX4 373 aaKnown RBP8.84□□□□□ -0.99
VPS45-213ENST00000618148 DNAJC18Q9H819 358 aa8.84□□□□□ -0.99
VPS45-213ENST00000618148 ZNF287Q9HBT7 754 aa8.84□□□□□ -0.99
VPS45-213ENST00000618148 PI4KBQ9UBF8 816 aa8.84□□□□□ -0.99
VPS45-213ENST00000618148 SWAP70Q9UH65 585 aa8.84□□□□□ -0.99
VPS45-213ENST00000618148 SERPINB13Q9UIV8 391 aa8.84□□□□□ -0.99
VPS45-213ENST00000618148 PPP2R3BQ9Y5P8 575 aa8.84□□□□□ -0.99
VPS45-213ENST00000618148 ASTN2O75129 1339 aaPredicted RBP8.83□□□□□ -1
VPS45-213ENST00000618148 GREB1LQ9C091 1923 aaPredicted RBP8.83□□□□□ -1
VPS45-213ENST00000618148 TBC1D12O60347 775 aa8.83□□□□□ -1
VPS45-213ENST00000618148 CD2BP2O95400 341 aaKnown RBP8.83□□□□□ -1
VPS45-213ENST00000618148 MCM5P33992 734 aa8.83□□□□□ -1
VPS45-213ENST00000618148 EPHX2P34913 555 aa8.83□□□□□ -1
VPS45-213ENST00000618148 ANP32AP39687 249 aaKnown RBP8.83□□□□□ -1
VPS45-213ENST00000618148 TNNI2P48788 182 aa8.83□□□□□ -1
VPS45-213ENST00000618148 MCM2P49736 904 aa8.83□□□□□ -1
VPS45-213ENST00000618148 TCP10Q12799 353 aa8.83□□□□□ -1
VPS45-213ENST00000618148 TRDNQ13061 729 aa8.83□□□□□ -1
VPS45-213ENST00000618148 TATDN1Q6P1N9 297 aa8.83□□□□□ -1
VPS45-213ENST00000618148 RALYLQ86SE5 291 aaKnown RBP8.83□□□□□ -1
VPS45-213ENST00000618148 FOXP4Q8IVH2 680 aaPredicted RBP8.83□□□□□ -1
VPS45-213ENST00000618148 ESR2Q92731 530 aa8.83□□□□□ -1
VPS45-213ENST00000618148 DYNLL2Q96FJ2 89 aa8.83□□□□□ -1
VPS45-213ENST00000618148 TAF1DQ9H5J8 278 aaPredicted RBP8.83□□□□□ -1
VPS45-213ENST00000618148 INCENPQ9NQS7 918 aa8.83□□□□□ -1
VPS45-213ENST00000618148 HERC5Q9UII4 1024 aaKnown RBP8.83□□□□□ -1
VPS45-213ENST00000618148 B4E1Z4 1266 aa8.82□□□□□ -1
VPS45-213ENST00000618148 TCP10L2B9ZVM9 353 aa8.82□□□□□ -1
VPS45-213ENST00000618148 KDM4AO75164 1064 aa8.82□□□□□ -1
VPS45-213ENST00000618148 CPA1P15085 419 aa8.82□□□□□ -1
VPS45-213ENST00000618148 RASA1P20936 1047 aa8.82□□□□□ -1
VPS45-213ENST00000618148 SHMT1P34896 483 aa8.82□□□□□ -1
VPS45-213ENST00000618148 NOVP48745 357 aa8.82□□□□□ -1
VPS45-213ENST00000618148 CDK8P49336 464 aa8.82□□□□□ -1
VPS45-213ENST00000618148 TOB2Q14106 344 aaPredicted RBP8.82□□□□□ -1
VPS45-213ENST00000618148 RASA3Q14644 834 aa8.82□□□□□ -1
VPS45-213ENST00000618148 RBM26Q5T8P6 1007 aaKnown RBP8.82□□□□□ -1
VPS45-213ENST00000618148 ANGEL2Q5VTE6 544 aaKnown RBP8.82□□□□□ -1
VPS45-213ENST00000618148 CYB5R4Q7L1T6 521 aa8.82□□□□□ -1
VPS45-213ENST00000618148 SLC44A5Q8NCS7 719 aa8.82□□□□□ -1
VPS45-213ENST00000618148 TMEM87BQ96K49 555 aa8.82□□□□□ -1
VPS45-213ENST00000618148 CSRNP1Q96S65 589 aa8.82□□□□□ -1
VPS45-213ENST00000618148 TMEM39BQ9GZU3 492 aa8.82□□□□□ -1
VPS45-213ENST00000618148 DEFB129Q9H1M3 183 aa8.82□□□□□ -1
VPS45-213ENST00000618148 VEZTQ9HBM0 779 aa8.82□□□□□ -1
VPS45-213ENST00000618148 PDRG1Q9NUG6 133 aa8.82□□□□□ -1
VPS45-213ENST00000618148 TCP11L1Q9NUJ3 509 aa8.82□□□□□ -1
VPS45-213ENST00000618148 GGA3Q9NZ52 723 aa8.82□□□□□ -1
VPS45-213ENST00000618148 ZSWIM5Q9P217 1185 aa8.82□□□□□ -1
VPS45-213ENST00000618148 IGKV6D-41A0A0C4DH26 115 aa8.81□□□□□ -1
VPS45-213ENST00000618148 PRC1O43663 620 aa8.81□□□□□ -1
VPS45-213ENST00000618148 LIFRP42702 1097 aa8.81□□□□□ -1
VPS45-213ENST00000618148 AK2P54819 239 aa8.81□□□□□ -1
VPS45-213ENST00000618148 ANKRD1Q15327 319 aa8.81□□□□□ -1
VPS45-213ENST00000618148 PNMA8AQ86V59 439 aaPredicted RBP8.81□□□□□ -1
VPS45-213ENST00000618148 SGMS1Q86VZ5 419 aa8.81□□□□□ -1
VPS45-213ENST00000618148 IGDCC4Q8TDY8 1250 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 106.5 ms