RNA–Protein interactions for RNA: ENST00000615216.4

CHD9-221, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5 BASIC

Gene CHD9, Length 10,603 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-221ENST00000615216 VEZTQ9HBM0 779 aa5.08□□□□□ -1.6
CHD9-221ENST00000615216 GOLGA6BA6NDN3 693 aa5.08□□□□□ -1.6
CHD9-221ENST00000615216 BACH1O14867 736 aa5.08□□□□□ -1.6
CHD9-221ENST00000615216 ZNF202O95125 648 aa5.08□□□□□ -1.6
CHD9-221ENST00000615216 LGSNQ5TDP6 509 aa5.08□□□□□ -1.6
CHD9-221ENST00000615216 SFMBT2Q5VUG0 894 aa5.08□□□□□ -1.6
CHD9-221ENST00000615216 CCDC84Q86UT8 332 aaPredicted RBP5.08□□□□□ -1.6
CHD9-221ENST00000615216 CNBD1Q8NA66 436 aa5.08□□□□□ -1.6
CHD9-221ENST00000615216 PPP1R9BQ96SB3 815 aa5.08□□□□□ -1.6
CHD9-221ENST00000615216 POLR2DO15514 142 aaKnown RBP5.08□□□□□ -1.6
CHD9-221ENST00000615216 RLBP1P12271 317 aa5.08□□□□□ -1.6
CHD9-221ENST00000615216 P4HA1P13674 534 aa5.08□□□□□ -1.6
CHD9-221ENST00000615216 POLD1P28340 1107 aa5.08□□□□□ -1.6
CHD9-221ENST00000615216 MAPK8IP2Q13387 824 aaPredicted RBP5.08□□□□□ -1.6
CHD9-221ENST00000615216 CWF19L2Q2TBE0 894 aaKnown RBP5.08□□□□□ -1.6
CHD9-221ENST00000615216 SPATS2Q86XZ4 545 aaKnown RBP5.08□□□□□ -1.6
CHD9-221ENST00000615216 DDX55Q8NHQ9 600 aaKnown RBP eCLIP5.08□□□□□ -1.63e-9■■■□□ 16.8
CHD9-221ENST00000615216 JDP2Q8WYK2 163 aa5.08□□□□□ -1.6
CHD9-221ENST00000615216 C19orf44Q9H6X5 657 aa5.08□□□□□ -1.6
CHD9-221ENST00000615216 LETM2Q2VYF4 491 aa5.08□□□□□ -1.6
CHD9-221ENST00000615216 DENND2CQ68D51 928 aa5.08□□□□□ -1.6
CHD9-221ENST00000615216 CHST3Q7LGC8 479 aa5.08□□□□□ -1.6
CHD9-221ENST00000615216 GOLGA5Q8TBA6 731 aa5.08□□□□□ -1.6
CHD9-221ENST00000615216 NELFBQ8WX92 580 aa5.08□□□□□ -1.6
CHD9-221ENST00000615216 FAM212AQ96EL1 285 aa5.08□□□□□ -1.6
CHD9-221ENST00000615216 FEZ2Q9UHY8 353 aaPredicted RBP5.08□□□□□ -1.6
CHD9-221ENST00000615216 ZCCHC11Q5TAX3 1644 aaKnown RBP5.08□□□□□ -1.6
CHD9-221ENST00000615216 ARHGEF35A5YM69 484 aa5.08□□□□□ -1.6
CHD9-221ENST00000615216 SGSM2O43147 1006 aa5.08□□□□□ -1.6
CHD9-221ENST00000615216 TOM1O60784 492 aa5.08□□□□□ -1.6
CHD9-221ENST00000615216 ITGA6P23229 1130 aa5.08□□□□□ -1.6
CHD9-221ENST00000615216 BIRC3Q13489 604 aa5.08□□□□□ -1.6
CHD9-221ENST00000615216 LEO1Q8WVC0 666 aaPredicted RBP5.08□□□□□ -1.6
CHD9-221ENST00000615216 NT5C3AQ9H0P0 336 aa5.08□□□□□ -1.6
CHD9-221ENST00000615216 SNX14Q9Y5W7 946 aa5.08□□□□□ -1.6
CHD9-221ENST00000615216 SMIM23A6NLE4 172 aa5.08□□□□□ -1.6
CHD9-221ENST00000615216 N4BP1O75113 896 aaKnown RBP5.08□□□□□ -1.6
CHD9-221ENST00000615216 VIMP08670 466 aaKnown RBP5.08□□□□□ -1.6
CHD9-221ENST00000615216 PHLDB2Q86SQ0 1253 aa5.08□□□□□ -1.6
CHD9-221ENST00000615216 TM6SF1Q9BZW5 370 aa5.08□□□□□ -1.6
CHD9-221ENST00000615216 MAGEF1Q9HAY2 307 aa5.08□□□□□ -1.6
CHD9-221ENST00000615216 BCAP29Q9UHQ4 241 aa5.08□□□□□ -1.6
CHD9-221ENST00000615216 IQSEC3Q9UPP2 1182 aaPredicted RBP5.08□□□□□ -1.6
CHD9-221ENST00000615216 PRDM15P57071 1507 aaPredicted RBP5.08□□□□□ -1.6
CHD9-221ENST00000615216 SH2D4BQ5SQS7 431 aa5.08□□□□□ -1.6
CHD9-221ENST00000615216 P3H4Q92791 437 aa5.08□□□□□ -1.6
CHD9-221ENST00000615216 RAB3IPQ96QF0 476 aaPredicted RBP5.08□□□□□ -1.6
CHD9-221ENST00000615216 A0A1B0GUA9 196 aa5.07□□□□□ -1.6
CHD9-221ENST00000615216 GPAA1O43292 621 aa5.07□□□□□ -1.6
CHD9-221ENST00000615216 ZNF365Q70YC5 407 aa5.07□□□□□ -1.6
CHD9-221ENST00000615216 XAGE2Q96GT9 111 aa5.07□□□□□ -1.6
CHD9-221ENST00000615216 IWS1Q96ST2 819 aa5.07□□□□□ -1.6
CHD9-221ENST00000615216 PNMA2Q9UL42 364 aa5.07□□□□□ -1.6
CHD9-221ENST00000615216 SH3TC1Q8TE82 1336 aa5.07□□□□□ -1.6
CHD9-221ENST00000615216 WHAMMP3Q1A5X7 153 aa5.07□□□□□ -1.6
CHD9-221ENST00000615216 BRDTQ58F21 947 aaPredicted RBP5.07□□□□□ -1.6
CHD9-221ENST00000615216 TRAPPC3LQ5T215 181 aa5.07□□□□□ -1.6
CHD9-221ENST00000615216 UTP14CQ5TAP6 766 aaKnown RBP5.07□□□□□ -1.6
CHD9-221ENST00000615216 GALNT17Q6IS24 598 aa5.07□□□□□ -1.6
CHD9-221ENST00000615216 KRBA2Q6ZNG9 492 aa5.07□□□□□ -1.6
CHD9-221ENST00000615216 PIK3AP1Q6ZUJ8 805 aa5.07□□□□□ -1.6
CHD9-221ENST00000615216 TRMT1LQ7Z2T5 733 aaKnown RBP5.07□□□□□ -1.6
CHD9-221ENST00000615216 RUNDC3BQ96NL0 473 aa5.07□□□□□ -1.6
CHD9-221ENST00000615216 CBX8Q9HC52 389 aa5.07□□□□□ -1.6
CHD9-221ENST00000615216 SBNO2Q9Y2G9 1366 aa5.07□□□□□ -1.6
CHD9-221ENST00000615216 CEBPAP49715 358 aaPredicted RBP5.07□□□□□ -1.6
CHD9-221ENST00000615216 SH3BGRP55822 239 aaPredicted RBP5.07□□□□□ -1.6
CHD9-221ENST00000615216 ZNF790Q6PG37 636 aa5.07□□□□□ -1.6
CHD9-221ENST00000615216 DPH6Q7L8W6 267 aa5.07□□□□□ -1.6
CHD9-221ENST00000615216 KBTBD3Q8NAB2 608 aa5.07□□□□□ -1.6
CHD9-221ENST00000615216 LPIN2Q92539 896 aa5.07□□□□□ -1.6
CHD9-221ENST00000615216 ACSBG1Q96GR2 724 aa5.07□□□□□ -1.6
CHD9-221ENST00000615216 ARPP21Q9UBL0 812 aaPredicted RBP5.07□□□□□ -1.6
CHD9-221ENST00000615216 DNM3Q9UQ16 869 aa5.07□□□□□ -1.6
CHD9-221ENST00000615216 CEP152O94986 1710 aa5.07□□□□□ -1.6
CHD9-221ENST00000615216 TAF12Q16514 161 aa5.07□□□□□ -1.6
CHD9-221ENST00000615216 SUPT20HQ8NEM7 779 aa5.07□□□□□ -1.6
CHD9-221ENST00000615216 SLC52A2Q9HAB3 445 aa5.07□□□□□ -1.6
CHD9-221ENST00000615216 GGA1Q9UJY5 639 aa5.07□□□□□ -1.6
CHD9-221ENST00000615216 MED23Q9ULK4 1368 aa5.07□□□□□ -1.6
CHD9-221ENST00000615216 TRPM1Q7Z4N2 1603 aa5.07□□□□□ -1.6
CHD9-221ENST00000615216 B4E1Z4 1266 aa5.07□□□□□ -1.6
CHD9-221ENST00000615216 BUB1BO60566 1050 aaPredicted RBP5.07□□□□□ -1.6
CHD9-221ENST00000615216 IL13P35225 146 aa5.07□□□□□ -1.6
CHD9-221ENST00000615216 KIF11P52732 1056 aa5.07□□□□□ -1.6
CHD9-221ENST00000615216 SARNPP82979 210 aaKnown RBP5.07□□□□□ -1.6
CHD9-221ENST00000615216 BRD3Q15059 726 aa5.07□□□□□ -1.6
CHD9-221ENST00000615216 TBC1D22AQ8WUA7 517 aa5.07□□□□□ -1.6
CHD9-221ENST00000615216 GTF3C6Q969F1 213 aa5.07□□□□□ -1.6
CHD9-221ENST00000615216 FAM114A2Q9NRY5 505 aa5.07□□□□□ -1.6
CHD9-221ENST00000615216 SERPINA10Q9UK55 444 aa5.07□□□□□ -1.6
CHD9-221ENST00000615216 WWC3Q9ULE0 1092 aa5.07□□□□□ -1.6
CHD9-221ENST00000615216 RGS12O14924 1447 aa5.07□□□□□ -1.6
CHD9-221ENST00000615216 DISP1Q96F81 1524 aa5.07□□□□□ -1.6
CHD9-221ENST00000615216 ZMYM6O95789 1325 aa5.07□□□□□ -1.6
CHD9-221ENST00000615216 H0YCG3 227 aa5.07□□□□□ -1.6
CHD9-221ENST00000615216 HOXA7P31268 230 aaPredicted RBP5.07□□□□□ -1.6
CHD9-221ENST00000615216 CA8P35219 290 aa5.07□□□□□ -1.6
CHD9-221ENST00000615216 RASSF2P50749 326 aa5.07□□□□□ -1.6
CHD9-221ENST00000615216 CCDC125Q86Z20 511 aa5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms