RNA–Protein interactions for RNA: ENST00000612404.4

SREK1-216, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 1 (best) BASIC

Gene SREK1, Length 2,128 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-216ENST00000612404 ME3Q16798 604 aa20.63■□□□□ 0.89
SREK1-216ENST00000612404 ZSCAN10Q96SZ4 725 aaPredicted RBP20.63■□□□□ 0.89
SREK1-216ENST00000612404 FAM196BA6NMK8 535 aa20.62■□□□□ 0.89
SREK1-216ENST00000612404 HIRAP54198 1017 aaPredicted RBP20.62■□□□□ 0.89
SREK1-216ENST00000612404 RASA3Q14644 834 aa20.62■□□□□ 0.89
SREK1-216ENST00000612404 WTAPQ15007 396 aa20.62■□□□□ 0.89
SREK1-216ENST00000612404 ANGEL2Q5VTE6 544 aaKnown RBP20.62■□□□□ 0.89
SREK1-216ENST00000612404 NFXL1Q6ZNB6 911 aa20.62■□□□□ 0.89
SREK1-216ENST00000612404 FOXP4Q8IVH2 680 aaPredicted RBP20.62■□□□□ 0.89
SREK1-216ENST00000612404 L3MBTL3Q96JM7 780 aaPredicted RBP20.62■□□□□ 0.89
SREK1-216ENST00000612404 SH2B1Q9NRF2 756 aaPredicted RBP20.62■□□□□ 0.89
SREK1-216ENST00000612404 TNKSO95271 1327 aa20.62■□□□□ 0.89
SREK1-216ENST00000612404 NT5C2P49902 561 aa20.62■□□□□ 0.89
SREK1-216ENST00000612404 LY9Q9HBG7 655 aa20.62■□□□□ 0.89
SREK1-216ENST00000612404 SIPA1L1O43166 1804 aa20.61■□□□□ 0.89
SREK1-216ENST00000612404 NMT2O60551 498 aa20.61■□□□□ 0.89
SREK1-216ENST00000612404 MTA3Q9BTC8 594 aa20.61■□□□□ 0.89
SREK1-216ENST00000612404 SENP2Q9HC62 589 aa20.61■□□□□ 0.89
SREK1-216ENST00000612404 GGA3Q9NZ52 723 aa20.61■□□□□ 0.89
SREK1-216ENST00000612404 MYH8P13535 1937 aa20.61■□□□□ 0.89
SREK1-216ENST00000612404 KLF18A0A0U1RQI7 1052 aa20.6■□□□□ 0.89
SREK1-216ENST00000612404 SHMT1P34896 483 aa20.6■□□□□ 0.89
SREK1-216ENST00000612404 CDAN1Q8IWY9 1227 aa20.6■□□□□ 0.89
SREK1-216ENST00000612404 NECAB1Q8N987 351 aa20.6■□□□□ 0.89
SREK1-216ENST00000612404 DNAJC18Q9H819 358 aa20.6■□□□□ 0.89
SREK1-216ENST00000612404 LIFRP42702 1097 aa20.6■□□□□ 0.89
SREK1-216ENST00000612404 APOBEC3FQ8IUX4 373 aaKnown RBP20.6■□□□□ 0.89
SREK1-216ENST00000612404 CCDC83Q8IWF9 413 aa20.6■□□□□ 0.89
SREK1-216ENST00000612404 ENAHQ8N8S7 591 aaPredicted RBP20.6■□□□□ 0.89
SREK1-216ENST00000612404 BRPF3Q9ULD4 1205 aa20.6■□□□□ 0.89
SREK1-216ENST00000612404 CCDC69A6NI79 296 aa20.59■□□□□ 0.89
SREK1-216ENST00000612404 DEFB129Q9H1M3 183 aa20.59■□□□□ 0.89
SREK1-216ENST00000612404 SLKQ9H2G2 1235 aaPredicted RBP20.59■□□□□ 0.89
SREK1-216ENST00000612404 CUL4AQ13619 759 aa20.59■□□□□ 0.89
SREK1-216ENST00000612404 IFIT1BQ5T764 474 aaKnown RBP20.59■□□□□ 0.89
SREK1-216ENST00000612404 TMTC2Q8N394 836 aa20.59■□□□□ 0.89
SREK1-216ENST00000612404 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.59■□□□□ 0.89
SREK1-216ENST00000612404 GOLGA8BA8MQT2 603 aa20.58■□□□□ 0.89
SREK1-216ENST00000612404 PDIA3P30101 505 aaKnown RBP20.58■□□□□ 0.89
SREK1-216ENST00000612404 SEC23AQ15436 765 aa20.58■□□□□ 0.89
SREK1-216ENST00000612404 SGMS1Q86VZ5 419 aa20.58■□□□□ 0.89
SREK1-216ENST00000612404 RAB11FIP4Q86YS3 637 aa20.58■□□□□ 0.89
SREK1-216ENST00000612404 ZNF274Q96GC6 653 aaPredicted RBP20.58■□□□□ 0.89
SREK1-216ENST00000612404 HERC5Q9UII4 1024 aaKnown RBP20.58■□□□□ 0.89
SREK1-216ENST00000612404 MPHOSPH10O00566 681 aaKnown RBP20.57■□□□□ 0.88
SREK1-216ENST00000612404 AKR1B1P15121 316 aa20.57■□□□□ 0.88
SREK1-216ENST00000612404 EPHX2P34913 555 aa20.57■□□□□ 0.88
SREK1-216ENST00000612404 EVCP57679 992 aa20.57■□□□□ 0.88
SREK1-216ENST00000612404 METTL16Q86W50 562 aaKnown RBP20.57■□□□□ 0.88
SREK1-216ENST00000612404 NEDD1Q8NHV4 660 aa20.57■□□□□ 0.88
SREK1-216ENST00000612404 IL17RBQ9NRM6 502 aa20.57■□□□□ 0.88
SREK1-216ENST00000612404 TAOK2Q9UL54 1235 aa20.57■□□□□ 0.88
SREK1-216ENST00000612404 SLC12A7Q9Y666 1083 aa20.57■□□□□ 0.88
SREK1-216ENST00000612404 CERKLQ49MI3 558 aaPredicted RBP20.57■□□□□ 0.88
SREK1-216ENST00000612404 SYNE3Q6ZMZ3 975 aa20.57■□□□□ 0.88
SREK1-216ENST00000612404 MIGA2Q7L4E1 593 aa20.57■□□□□ 0.88
SREK1-216ENST00000612404 IQCA1LA6NCM1 817 aa20.56■□□□□ 0.88
SREK1-216ENST00000612404 CCT2P78371 535 aaKnown RBP20.56■□□□□ 0.88
SREK1-216ENST00000612404 CCDC178Q5BJE1 867 aa20.56■□□□□ 0.88
SREK1-216ENST00000612404 APOA5Q6Q788 366 aa20.56■□□□□ 0.88
SREK1-216ENST00000612404 GTF3C6Q969F1 213 aa20.56■□□□□ 0.88
SREK1-216ENST00000612404 TCP11L1Q9NUJ3 509 aa20.56■□□□□ 0.88
SREK1-216ENST00000612404 PGAP2Q9UHJ9 254 aa20.56■□□□□ 0.88
SREK1-216ENST00000612404 PFKFB2O60825 505 aa20.56■□□□□ 0.88
SREK1-216ENST00000612404 TATDN1Q6P1N9 297 aa20.56■□□□□ 0.88
SREK1-216ENST00000612404 MICU3Q86XE3 530 aa20.56■□□□□ 0.88
SREK1-216ENST00000612404 TEPSINQ96N21 525 aa20.56■□□□□ 0.88
SREK1-216ENST00000612404 MYL10Q9BUA6 226 aa20.56■□□□□ 0.88
SREK1-216ENST00000612404 STX8Q9UNK0 236 aa20.56■□□□□ 0.88
SREK1-216ENST00000612404 RXRAP19793 462 aa20.55■□□□□ 0.88
SREK1-216ENST00000612404 SCRN1Q12765 414 aa20.55■□□□□ 0.88
SREK1-216ENST00000612404 USP50Q70EL3 339 aaPredicted RBP20.55■□□□□ 0.88
SREK1-216ENST00000612404 CCDC17Q96LX7 622 aa20.55■□□□□ 0.88
SREK1-216ENST00000612404 NCOA5Q9HCD5 579 aaKnown RBP20.55■□□□□ 0.88
SREK1-216ENST00000612404 ZBTB43O43298 467 aa20.54■□□□□ 0.88
SREK1-216ENST00000612404 ST3GAL1Q11201 340 aa20.54■□□□□ 0.88
SREK1-216ENST00000612404 DCPSQ96C86 337 aaKnown RBP20.54■□□□□ 0.88
SREK1-216ENST00000612404 INTS4Q96HW7 963 aaKnown RBP20.54■□□□□ 0.88
SREK1-216ENST00000612404 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.54■□□□□ 0.88
SREK1-216ENST00000612404 GDF11O95390 407 aa20.54■□□□□ 0.88
SREK1-216ENST00000612404 EAPPQ56P03 285 aaPredicted RBP20.54■□□□□ 0.88
SREK1-216ENST00000612404 PRAMEF18Q5VWM3 479 aa20.54■□□□□ 0.88
SREK1-216ENST00000612404 RCSD1Q6JBY9 416 aa20.54■□□□□ 0.88
SREK1-216ENST00000612404 DGKHQ86XP1 1220 aa20.54■□□□□ 0.88
SREK1-216ENST00000612404 CCDC144CPQ8IYA2 1237 aa20.54■□□□□ 0.88
SREK1-216ENST00000612404 CEP95Q96GE4 821 aa20.54■□□□□ 0.88
SREK1-216ENST00000612404 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.54■□□□□ 0.88
SREK1-216ENST00000612404 TAF1DQ9H5J8 278 aaPredicted RBP20.54■□□□□ 0.88
SREK1-216ENST00000612404 HPS5Q9UPZ3 1129 aa20.54■□□□□ 0.88
SREK1-216ENST00000612404 POLR2AP24928 1970 aaKnown RBP20.54■□□□□ 0.88
SREK1-216ENST00000612404 PITPNM2Q9BZ72 1349 aa20.54■□□□□ 0.88
SREK1-216ENST00000612404 SCN4AP35499 1836 aa20.54■□□□□ 0.88
SREK1-216ENST00000612404 TBC1D12O60347 775 aa20.53■□□□□ 0.88
SREK1-216ENST00000612404 DTNBO60941 627 aa20.53■□□□□ 0.88
SREK1-216ENST00000612404 METAP2P50579 478 aaKnown RBP eCLIP20.53■□□□□ 0.88
SREK1-216ENST00000612404 NBPF12Q5TAG4 269 aaPredicted RBP20.53■□□□□ 0.88
SREK1-216ENST00000612404 CATIPQ7Z7H3 387 aa20.53■□□□□ 0.88
SREK1-216ENST00000612404 ZNF654Q8IZM8 581 aa20.53■□□□□ 0.88
SREK1-216ENST00000612404 KAT14Q9H8E8 782 aa20.53■□□□□ 0.88
SREK1-216ENST00000612404 PLIN4Q96Q06 1357 aa20.53■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms