RNA–Protein interactions for RNA: ENST00000601912.5

VRK3-225, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VRK3, Length 1,668 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-225ENST00000601912 RCAN1P53805 252 aa21.06■□□□□ 0.96
VRK3-225ENST00000601912 FKBP1CQ5VVH2 108 aa21.06■□□□□ 0.96
VRK3-225ENST00000601912 ZFPM1Q8IX07 1006 aa21.06■□□□□ 0.96
VRK3-225ENST00000601912 NCOA5Q9HCD5 579 aaKnown RBP21.06■□□□□ 0.96
VRK3-225ENST00000601912 TCP11L1Q9NUJ3 509 aa21.06■□□□□ 0.96
VRK3-225ENST00000601912 ZNF541Q9H0D2 1346 aa21.06■□□□□ 0.96
VRK3-225ENST00000601912 CLRN2A0PK11 232 aa21.05■□□□□ 0.96
VRK3-225ENST00000601912 PDCP20941 246 aa21.05■□□□□ 0.96
VRK3-225ENST00000601912 HMGN5P82970 282 aaKnown RBP21.05■□□□□ 0.96
VRK3-225ENST00000601912 MICU3Q86XE3 530 aa21.05■□□□□ 0.96
VRK3-225ENST00000601912 MICALL2Q8IY33 904 aa21.05■□□□□ 0.96
VRK3-225ENST00000601912 CRACR2BQ8N4Y2 399 aaPredicted RBP21.05■□□□□ 0.96
VRK3-225ENST00000601912 ZBED3Q96IU2 234 aaPredicted RBP21.05■□□□□ 0.96
VRK3-225ENST00000601912 TRIM34Q9BYJ4 488 aa21.05■□□□□ 0.96
VRK3-225ENST00000601912 CNOT7Q9UIV1 285 aaKnown RBP21.05■□□□□ 0.96
VRK3-225ENST00000601912 KIF3AQ9Y496 699 aa21.05■□□□□ 0.96
VRK3-225ENST00000601912 DICER1Q9UPY3 1922 aaKnown RBP21.05■□□□□ 0.96
VRK3-225ENST00000601912 GOLGA8AA7E2F4 631 aa21.05■□□□□ 0.96
VRK3-225ENST00000601912 TCP10L2B9ZVM9 353 aa21.05■□□□□ 0.96
VRK3-225ENST00000601912 WNT10BO00744 389 aa21.05■□□□□ 0.96
VRK3-225ENST00000601912 CPLX2Q6PUV4 134 aaKnown RBP21.05■□□□□ 0.96
VRK3-225ENST00000601912 CATIPQ7Z7H3 387 aa21.05■□□□□ 0.96
VRK3-225ENST00000601912 DGKHQ86XP1 1220 aa21.05■□□□□ 0.96
VRK3-225ENST00000601912 FOXP4Q8IVH2 680 aaPredicted RBP21.05■□□□□ 0.96
VRK3-225ENST00000601912 GPC2Q8N158 579 aa21.05■□□□□ 0.96
VRK3-225ENST00000601912 COL2A1P02458 1487 aaPredicted RBP21.04■□□□□ 0.96
VRK3-225ENST00000601912 DDTLA6NHG4 134 aaPredicted RBP21.04■□□□□ 0.96
VRK3-225ENST00000601912 RAB11FIP4Q86YS3 637 aa21.04■□□□□ 0.96
VRK3-225ENST00000601912 ZNF654Q8IZM8 581 aa21.04■□□□□ 0.96
VRK3-225ENST00000601912 FAM184AQ8NB25 1140 aa21.04■□□□□ 0.96
VRK3-225ENST00000601912 NSUN7Q8NE18 718 aaKnown RBP21.04■□□□□ 0.96
VRK3-225ENST00000601912 SMARCC2Q8TAQ2 1214 aa21.04■□□□□ 0.96
VRK3-225ENST00000601912 VEZTQ9HBM0 779 aa21.04■□□□□ 0.96
VRK3-225ENST00000601912 ATRNL1Q5VV63 1379 aa21.03■□□□□ 0.96
VRK3-225ENST00000601912 CCDC196A0A1B0GTZ2 297 aa21.03■□□□□ 0.96
VRK3-225ENST00000601912 H7C1D1 291 aa21.03■□□□□ 0.96
VRK3-225ENST00000601912 NMT2O60551 498 aa21.03■□□□□ 0.96
VRK3-225ENST00000601912 CDKL5O76039 1030 aa21.03■□□□□ 0.96
VRK3-225ENST00000601912 CALM1P0DP23 149 aa21.03■□□□□ 0.96
VRK3-225ENST00000601912 CALM2P0DP24 149 aa21.03■□□□□ 0.96
VRK3-225ENST00000601912 CALM3P0DP25 149 aa21.03■□□□□ 0.96
VRK3-225ENST00000601912 PPP2R5BQ15173 497 aa21.03■□□□□ 0.96
VRK3-225ENST00000601912 NEDD1Q8NHV4 660 aa21.03■□□□□ 0.96
VRK3-225ENST00000601912 FAM151AQ8WW52 585 aa21.03■□□□□ 0.96
VRK3-225ENST00000601912 RNF181Q9P0P0 153 aa21.03■□□□□ 0.96
VRK3-225ENST00000601912 WDR33Q9C0J8 1336 aaKnown RBP21.03■□□□□ 0.96
VRK3-225ENST00000601912 SBF1O95248 1867 aa21.03■□□□□ 0.96
VRK3-225ENST00000601912 SHTN1A0MZ66 631 aa21.02■□□□□ 0.96
VRK3-225ENST00000601912 PTPDC1A2A3K4 754 aa21.02■□□□□ 0.96
VRK3-225ENST00000601912 JAK2O60674 1132 aa21.02■□□□□ 0.96
VRK3-225ENST00000601912 CTDNEP1O95476 244 aa21.02■□□□□ 0.96
VRK3-225ENST00000601912 SYT1P21579 422 aa21.02■□□□□ 0.96
VRK3-225ENST00000601912 PKP1Q13835 747 aa21.02■□□□□ 0.96
VRK3-225ENST00000601912 NBPF9Q3BBW0 867 aa21.02■□□□□ 0.96
VRK3-225ENST00000601912 RBM26Q5T8P6 1007 aaKnown RBP21.02■□□□□ 0.96
VRK3-225ENST00000601912 LARP1BQ659C4 914 aaKnown RBP21.02■□□□□ 0.96
VRK3-225ENST00000601912 SH3BP5LQ7L8J4 393 aa21.02■□□□□ 0.96
VRK3-225ENST00000601912 ANKS1AQ92625 1134 aa21.02■□□□□ 0.96
VRK3-225ENST00000601912 MYL10Q9BUA6 226 aa21.02■□□□□ 0.96
VRK3-225ENST00000601912 IL17RBQ9NRM6 502 aa21.02■□□□□ 0.96
VRK3-225ENST00000601912 STX6O43752 255 aa21.02■□□□□ 0.95
VRK3-225ENST00000601912 RXRAP19793 462 aa21.02■□□□□ 0.95
VRK3-225ENST00000601912 GPR162Q16538 588 aa21.02■□□□□ 0.95
VRK3-225ENST00000601912 RTN1Q16799 776 aa21.02■□□□□ 0.95
VRK3-225ENST00000601912 FAM83AQ86UY5 434 aa21.02■□□□□ 0.95
VRK3-225ENST00000601912 NUP133Q8WUM0 1156 aa21.02■□□□□ 0.95
VRK3-225ENST00000601912 TNPO1Q92973 898 aaKnown RBP21.02■□□□□ 0.95
VRK3-225ENST00000601912 DDX11Q96FC9 970 aa21.02■□□□□ 0.95
VRK3-225ENST00000601912 KAT14Q9H8E8 782 aa21.02■□□□□ 0.95
VRK3-225ENST00000601912 NID2Q14112 1375 aa21.01■□□□□ 0.95
VRK3-225ENST00000601912 DDAH1O94760 285 aa21.01■□□□□ 0.95
VRK3-225ENST00000601912 BRD1O95696 1058 aa21.01■□□□□ 0.95
VRK3-225ENST00000601912 TNNI2P48788 182 aa21.01■□□□□ 0.95
VRK3-225ENST00000601912 CCDC144CPQ8IYA2 1237 aa21.01■□□□□ 0.95
VRK3-225ENST00000601912 FANCBQ8NB91 859 aa21.01■□□□□ 0.95
VRK3-225ENST00000601912 CCDC17Q96LX7 622 aa21.01■□□□□ 0.95
VRK3-225ENST00000601912 CSRNP1Q96S65 589 aa21.01■□□□□ 0.95
VRK3-225ENST00000601912 SHMT1P34896 483 aa21■□□□□ 0.95
VRK3-225ENST00000601912 ADD1P35611 737 aaKnown RBP21■□□□□ 0.95
VRK3-225ENST00000601912 RCSD1Q6JBY9 416 aa21■□□□□ 0.95
VRK3-225ENST00000601912 DTNBO60941 627 aa20.99■□□□□ 0.95
VRK3-225ENST00000601912 CDC27P30260 824 aa20.99■□□□□ 0.95
VRK3-225ENST00000601912 TNFAIP1Q13829 316 aa20.99■□□□□ 0.95
VRK3-225ENST00000601912 KIF4BQ2VIQ3 1234 aa20.99■□□□□ 0.95
VRK3-225ENST00000601912 C9orf131Q5VYM1 1079 aa20.99■□□□□ 0.95
VRK3-225ENST00000601912 SAMD7Q7Z3H4 446 aa20.99■□□□□ 0.95
VRK3-225ENST00000601912 METTL16Q86W50 562 aaKnown RBP20.99■□□□□ 0.95
VRK3-225ENST00000601912 GPRC5DQ9NZD1 345 aa20.99■□□□□ 0.95
VRK3-225ENST00000601912 STX8Q9UNK0 236 aa20.99■□□□□ 0.95
VRK3-225ENST00000601912 TBC1D10BQ4KMP7 808 aaPredicted RBP20.99■□□□□ 0.95
VRK3-225ENST00000601912 PPP4R3BQ5MIZ7 849 aa20.99■□□□□ 0.95
VRK3-225ENST00000601912 GBP4Q96PP9 640 aa20.99■□□□□ 0.95
VRK3-225ENST00000601912 HERC5Q9UII4 1024 aaKnown RBP20.99■□□□□ 0.95
VRK3-225ENST00000601912 ZDHHC9Q9Y397 364 aa20.99■□□□□ 0.95
VRK3-225ENST00000601912 PLIN4Q96Q06 1357 aa20.98■□□□□ 0.95
VRK3-225ENST00000601912 GRIN3BO60391 1043 aa20.98■□□□□ 0.95
VRK3-225ENST00000601912 AKR1B1P15121 316 aa20.98■□□□□ 0.95
VRK3-225ENST00000601912 TROAPQ12815 778 aa20.98■□□□□ 0.95
VRK3-225ENST00000601912 FAM217BQ9NTX9 383 aaPredicted RBP20.98■□□□□ 0.95
VRK3-225ENST00000601912 RBM28Q9NW13 759 aaKnown RBP20.98■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms