RNA–Protein interactions for RNA: ENST00000600117.1

CCDC9-205, Transcript of coiled-coil domain containing 9, humanhuman

TSL 2

Gene CCDC9, Length 580 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-205ENST00000600117 EFCC1Q9HA90 598 aa22.5■■□□□ 1.19
CCDC9-205ENST00000600117 ZMYM6O95789 1325 aa22.5■■□□□ 1.19
CCDC9-205ENST00000600117 A0A0C4DFX4 3053 aa22.49■■□□□ 1.19
CCDC9-205ENST00000600117 CYP2D7A0A087X1C5 515 aa22.49■■□□□ 1.19
CCDC9-205ENST00000600117 SMIM22K7EJ46 135 aa22.49■■□□□ 1.19
CCDC9-205ENST00000600117 PPP1R12BO60237 982 aaPredicted RBP22.49■■□□□ 1.19
CCDC9-205ENST00000600117 TDO2P48775 406 aa22.49■■□□□ 1.19
CCDC9-205ENST00000600117 PLCD1P51178 756 aa22.49■■□□□ 1.19
CCDC9-205ENST00000600117 MAP3K10Q02779 954 aa22.49■■□□□ 1.19
CCDC9-205ENST00000600117 PTH1RQ03431 593 aa22.49■■□□□ 1.19
CCDC9-205ENST00000600117 C12orf60Q5U649 245 aa22.49■■□□□ 1.19
CCDC9-205ENST00000600117 OTUD7BQ6GQQ9 843 aa22.49■■□□□ 1.19
CCDC9-205ENST00000600117 METTL16Q86W50 562 aaKnown RBP22.49■■□□□ 1.19
CCDC9-205ENST00000600117 DDRGK1Q96HY6 314 aa22.49■■□□□ 1.19
CCDC9-205ENST00000600117 NACAP1Q9BZK3 213 aa22.49■■□□□ 1.19
CCDC9-205ENST00000600117 ARPP21Q9UBL0 812 aaPredicted RBP22.49■■□□□ 1.19
CCDC9-205ENST00000600117 FGAP02671 866 aa22.48■■□□□ 1.19
CCDC9-205ENST00000600117 POLR3DP05423 398 aaPredicted RBP22.48■■□□□ 1.19
CCDC9-205ENST00000600117 TTC6Q86TZ1 520 aa22.48■■□□□ 1.19
CCDC9-205ENST00000600117 CLMNQ96JQ2 1002 aa22.48■■□□□ 1.19
CCDC9-205ENST00000600117 NAPBQ9H115 298 aa22.48■■□□□ 1.19
CCDC9-205ENST00000600117 PI4KBQ9UBF8 816 aa22.48■■□□□ 1.19
CCDC9-205ENST00000600117 HLA-DOAP06340 250 aa22.47■■□□□ 1.19
CCDC9-205ENST00000600117 CRHR2Q13324 411 aa22.47■■□□□ 1.19
CCDC9-205ENST00000600117 HOOK2Q96ED9 719 aa22.47■■□□□ 1.19
CCDC9-205ENST00000600117 LSG1Q9H089 658 aaKnown RBP22.47■■□□□ 1.19
CCDC9-205ENST00000600117 EHD4Q9H223 541 aa22.47■■□□□ 1.19
CCDC9-205ENST00000600117 DNAJC18Q9H819 358 aa22.47■■□□□ 1.19
CCDC9-205ENST00000600117 TBC1D12O60347 775 aa22.46■■□□□ 1.19
CCDC9-205ENST00000600117 SP3Q02447 781 aa22.46■■□□□ 1.19
CCDC9-205ENST00000600117 GABPAQ06546 454 aa22.46■■□□□ 1.19
CCDC9-205ENST00000600117 MIGA2Q7L4E1 593 aa22.46■■□□□ 1.19
CCDC9-205ENST00000600117 FOXP4Q8IVH2 680 aaPredicted RBP22.46■■□□□ 1.19
CCDC9-205ENST00000600117 TMEM106CQ9BVX2 250 aa22.46■■□□□ 1.19
CCDC9-205ENST00000600117 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.46■■□□□ 1.19
CCDC9-205ENST00000600117 COLQQ9Y215 455 aaPredicted RBP22.46■■□□□ 1.19
CCDC9-205ENST00000600117 FAM196BA6NMK8 535 aa22.45■■□□□ 1.18
CCDC9-205ENST00000600117 USP2O75604 605 aaPredicted RBP22.45■■□□□ 1.18
CCDC9-205ENST00000600117 DCAF15Q66K64 600 aa22.45■■□□□ 1.18
CCDC9-205ENST00000600117 ZNF333Q96JL9 665 aa22.45■■□□□ 1.18
CCDC9-205ENST00000600117 HERC5Q9UII4 1024 aaKnown RBP22.45■■□□□ 1.18
CCDC9-205ENST00000600117 ROBO3Q96MS0 1386 aa22.45■■□□□ 1.18
CCDC9-205ENST00000600117 LAMA4Q16363 1823 aa22.44■■□□□ 1.18
CCDC9-205ENST00000600117 MAP4K1Q92918 833 aa22.44■■□□□ 1.18
CCDC9-205ENST00000600117 DYNLL2Q96FJ2 89 aa22.44■■□□□ 1.18
CCDC9-205ENST00000600117 SERPINB13Q9UIV8 391 aa22.44■■□□□ 1.18
CCDC9-205ENST00000600117 ZNF112Q9UJU3 913 aa22.44■■□□□ 1.18
CCDC9-205ENST00000600117 TESPA1A2RU30 521 aaPredicted RBP22.43■■□□□ 1.18
CCDC9-205ENST00000600117 MINDY4BA8MYZ0 360 aa22.43■■□□□ 1.18
CCDC9-205ENST00000600117 PPARAQ07869 468 aa22.43■■□□□ 1.18
CCDC9-205ENST00000600117 KIAA1211Q6ZU35 1233 aa22.43■■□□□ 1.18
CCDC9-205ENST00000600117 AMOTL1Q8IY63 956 aa22.43■■□□□ 1.18
CCDC9-205ENST00000600117 ZNF341Q9BYN7 854 aa22.43■■□□□ 1.18
CCDC9-205ENST00000600117 XPO5Q9HAV4 1204 aaKnown RBP eCLIP22.43■■□□□ 1.18
CCDC9-205ENST00000600117 ANO2Q9NQ90 1003 aa22.43■■□□□ 1.18
CCDC9-205ENST00000600117 ANAPC4Q9UJX5 808 aa22.43■■□□□ 1.18
CCDC9-205ENST00000600117 OTOFQ9HC10 1997 aa22.43■■□□□ 1.18
CCDC9-205ENST00000600117 PHF20L1A8MW92 1017 aa22.42■■□□□ 1.18
CCDC9-205ENST00000600117 GJA5P36382 358 aa22.42■■□□□ 1.18
CCDC9-205ENST00000600117 CAP1Q01518 475 aa22.42■■□□□ 1.18
CCDC9-205ENST00000600117 C8orf34Q49A92 452 aa22.42■■□□□ 1.18
CCDC9-205ENST00000600117 C16orf86Q6ZW13 317 aa22.42■■□□□ 1.18
CCDC9-205ENST00000600117 CRACR2BQ8N4Y2 399 aaPredicted RBP22.42■■□□□ 1.18
CCDC9-205ENST00000600117 SLC44A5Q8NCS7 719 aa22.42■■□□□ 1.18
CCDC9-205ENST00000600117 PTPN18Q99952 460 aa22.42■■□□□ 1.18
CCDC9-205ENST00000600117 TAOK2Q9UL54 1235 aa22.42■■□□□ 1.18
CCDC9-205ENST00000600117 SHMT1P34896 483 aa22.41■■□□□ 1.18
CCDC9-205ENST00000600117 IREB2P48200 963 aaKnown RBP22.41■■□□□ 1.18
CCDC9-205ENST00000600117 RRP1BQ14684 758 aaKnown RBP22.41■■□□□ 1.18
CCDC9-205ENST00000600117 NBPF11Q86T75 865 aa22.41■■□□□ 1.18
CCDC9-205ENST00000600117 DDX55Q8NHQ9 600 aaKnown RBP eCLIP22.41■■□□□ 1.18
CCDC9-205ENST00000600117 NBPF3Q9H094 633 aa22.41■■□□□ 1.18
CCDC9-205ENST00000600117 CTNNA3Q9UI47 895 aa22.41■■□□□ 1.18
CCDC9-205ENST00000600117 RBM8AQ9Y5S9 174 aaKnown RBP22.41■■□□□ 1.18
CCDC9-205ENST00000600117 TACC3Q9Y6A5 838 aa22.41■■□□□ 1.18
CCDC9-205ENST00000600117 U3KPZ7 1027 aaPredicted RBP22.41■■□□□ 1.18
CCDC9-205ENST00000600117 CTDSPL2Q05D32 466 aa22.4■■□□□ 1.18
CCDC9-205ENST00000600117 ARHGEF6Q15052 776 aa22.4■■□□□ 1.18
CCDC9-205ENST00000600117 TATDN1Q6P1N9 297 aa22.4■■□□□ 1.18
CCDC9-205ENST00000600117 ANKRD13AQ8IZ07 590 aa22.4■■□□□ 1.18
CCDC9-205ENST00000600117 SWAP70Q9UH65 585 aa22.4■■□□□ 1.18
CCDC9-205ENST00000600117 CUL9Q8IWT3 2517 aa22.4■■□□□ 1.18
CCDC9-205ENST00000600117 INPP5BP32019 993 aa22.39■■□□□ 1.17
CCDC9-205ENST00000600117 CDK8P49336 464 aa22.39■■□□□ 1.17
CCDC9-205ENST00000600117 HAND2P61296 217 aa22.39■■□□□ 1.17
CCDC9-205ENST00000600117 SLC9C1Q4G0N8 1177 aa22.39■■□□□ 1.17
CCDC9-205ENST00000600117 PPP1R3FQ6ZSY5 799 aaPredicted RBP22.39■■□□□ 1.17
CCDC9-205ENST00000600117 WRNIP1Q96S55 665 aa22.39■■□□□ 1.17
CCDC9-205ENST00000600117 TRIM34Q9BYJ4 488 aa22.39■■□□□ 1.17
CCDC9-205ENST00000600117 REC8O95072 547 aa22.38■■□□□ 1.17
CCDC9-205ENST00000600117 MAP3K9P80192 1104 aa22.38■■□□□ 1.17
CCDC9-205ENST00000600117 DDX52Q9Y2R4 599 aaKnown RBP eCLIP22.38■■□□□ 1.17
CCDC9-205ENST00000600117 ZNF213O14771 459 aa22.37■■□□□ 1.17
CCDC9-205ENST00000600117 FGRP09769 529 aa22.37■■□□□ 1.17
CCDC9-205ENST00000600117 NECTIN1Q15223 517 aa22.37■■□□□ 1.17
CCDC9-205ENST00000600117 TBC1D10CQ8IV04 446 aa22.37■■□□□ 1.17
CCDC9-205ENST00000600117 STK11IPQ8N1F8 1099 aa22.37■■□□□ 1.17
CCDC9-205ENST00000600117 PTCH2Q9Y6C5 1203 aa22.37■■□□□ 1.17
CCDC9-205ENST00000600117 DOCK1Q14185 1865 aa22.37■■□□□ 1.17
CCDC9-205ENST00000600117 COL6A3P12111 3177 aa22.36■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 87.1 ms