RNA–Protein interactions for RNA: ENST00000593008.1

DDX39A-220, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 538 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-220ENST00000593008 PATL2C9JE40 543 aaKnown RBP11.5□□□□□ -0.57
DDX39A-220ENST00000593008 IRF6O14896 467 aa11.5□□□□□ -0.57
DDX39A-220ENST00000593008 PLCG2P16885 1265 aa11.5□□□□□ -0.57
DDX39A-220ENST00000593008 RRP1BQ14684 758 aaKnown RBP11.5□□□□□ -0.57
DDX39A-220ENST00000593008 ERO1BQ86YB8 467 aa11.5□□□□□ -0.57
DDX39A-220ENST00000593008 RASEFQ8IZ41 740 aa11.5□□□□□ -0.57
DDX39A-220ENST00000593008 BRI3BPQ8WY22 251 aa11.5□□□□□ -0.57
DDX39A-220ENST00000593008 MS4A4AQ96JQ5 239 aa11.5□□□□□ -0.57
DDX39A-220ENST00000593008 NAPBQ9H115 298 aa11.5□□□□□ -0.57
DDX39A-220ENST00000593008 ZNF112Q9UJU3 913 aa11.5□□□□□ -0.57
DDX39A-220ENST00000593008 NEDD4P46934 1319 aa11.5□□□□□ -0.57
DDX39A-220ENST00000593008 CCL15-CCL14A0A0B4J2E2 113 aa11.49□□□□□ -0.57
DDX39A-220ENST00000593008 PHF20L1A8MW92 1017 aa11.49□□□□□ -0.57
DDX39A-220ENST00000593008 SLC27A2O14975 620 aa11.49□□□□□ -0.57
DDX39A-220ENST00000593008 NPM3O75607 178 aaKnown RBP11.49□□□□□ -0.57
DDX39A-220ENST00000593008 PRDM1O75626 825 aa11.49□□□□□ -0.57
DDX39A-220ENST00000593008 CYP21A2P08686 494 aa11.49□□□□□ -0.57
DDX39A-220ENST00000593008 GTF2A2P52657 109 aa11.49□□□□□ -0.57
DDX39A-220ENST00000593008 INHBEP58166 350 aa11.49□□□□□ -0.57
DDX39A-220ENST00000593008 CCL15Q16663 113 aa11.49□□□□□ -0.57
DDX39A-220ENST00000593008 TICAM2Q86XR7 235 aa11.49□□□□□ -0.57
DDX39A-220ENST00000593008 MAP4K1Q92918 833 aa11.49□□□□□ -0.57
DDX39A-220ENST00000593008 DSCC1Q9BVC3 393 aa11.49□□□□□ -0.57
DDX39A-220ENST00000593008 USP26Q9BXU7 913 aa11.49□□□□□ -0.57
DDX39A-220ENST00000593008 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.49□□□□□ -0.57
DDX39A-220ENST00000593008 POLR3DP05423 398 aaPredicted RBP11.48□□□□□ -0.57
DDX39A-220ENST00000593008 GNAT2P19087 354 aa11.48□□□□□ -0.57
DDX39A-220ENST00000593008 JAG1P78504 1218 aa11.48□□□□□ -0.57
DDX39A-220ENST00000593008 PPARAQ07869 468 aa11.48□□□□□ -0.57
DDX39A-220ENST00000593008 PPIL2Q13356 520 aa11.48□□□□□ -0.57
DDX39A-220ENST00000593008 C12orf60Q5U649 245 aa11.48□□□□□ -0.57
DDX39A-220ENST00000593008 CREB3L3Q68CJ9 461 aa11.48□□□□□ -0.57
DDX39A-220ENST00000593008 TMED8Q6PL24 325 aaPredicted RBP11.48□□□□□ -0.57
DDX39A-220ENST00000593008 KIAA1211Q6ZU35 1233 aa11.48□□□□□ -0.57
DDX39A-220ENST00000593008 CCDC84Q86UT8 332 aaPredicted RBP11.48□□□□□ -0.57
DDX39A-220ENST00000593008 CLEC10AQ8IUN9 316 aa11.48□□□□□ -0.57
DDX39A-220ENST00000593008 SCYL3Q8IZE3 742 aa11.48□□□□□ -0.57
DDX39A-220ENST00000593008 ZNF296Q8WUU4 475 aaPredicted RBP11.48□□□□□ -0.57
DDX39A-220ENST00000593008 PICK1Q9NRD5 415 aa11.48□□□□□ -0.57
DDX39A-220ENST00000593008 ATP8A2Q9NTI2 1148 aa11.48□□□□□ -0.57
DDX39A-220ENST00000593008 COL2A1P02458 1487 aaPredicted RBP11.48□□□□□ -0.57
DDX39A-220ENST00000593008 ROBO3Q96MS0 1386 aa11.47□□□□□ -0.57
DDX39A-220ENST00000593008 ZMYM6O95789 1325 aa11.47□□□□□ -0.57
DDX39A-220ENST00000593008 TESPA1A2RU30 521 aaPredicted RBP11.47□□□□□ -0.57
DDX39A-220ENST00000593008 GPR25O00155 361 aa11.47□□□□□ -0.57
DDX39A-220ENST00000593008 ALDH1A1P00352 501 aa11.47□□□□□ -0.57
DDX39A-220ENST00000593008 CPA1P15085 419 aa11.47□□□□□ -0.57
DDX39A-220ENST00000593008 MAP3K10Q02779 954 aa11.47□□□□□ -0.57
DDX39A-220ENST00000593008 PPATQ06203 517 aa11.47□□□□□ -0.57
DDX39A-220ENST00000593008 CRHR2Q13324 411 aa11.47□□□□□ -0.57
DDX39A-220ENST00000593008 SNAPC2Q13487 334 aa11.47□□□□□ -0.57
DDX39A-220ENST00000593008 DGKZQ13574 1117 aa11.47□□□□□ -0.57
DDX39A-220ENST00000593008 NECTIN1Q15223 517 aa11.47□□□□□ -0.57
DDX39A-220ENST00000593008 ALX1Q15699 326 aa11.47□□□□□ -0.57
DDX39A-220ENST00000593008 ADCK5Q3MIX3 580 aa11.47□□□□□ -0.57
DDX39A-220ENST00000593008 NOL9Q5SY16 702 aaKnown RBP11.47□□□□□ -0.57
DDX39A-220ENST00000593008 OTUD7BQ6GQQ9 843 aa11.47□□□□□ -0.57
DDX39A-220ENST00000593008 FAM43AQ8N2R8 423 aa11.47□□□□□ -0.57
DDX39A-220ENST00000593008 ARPP21Q9UBL0 812 aaPredicted RBP11.47□□□□□ -0.57
DDX39A-220ENST00000593008 ZHX2Q9Y6X8 837 aa11.47□□□□□ -0.57
DDX39A-220ENST00000593008 U3KPZ7 1027 aaPredicted RBP11.47□□□□□ -0.57
DDX39A-220ENST00000593008 CASP8AP2Q9UKL3 1982 aa11.47□□□□□ -0.57
DDX39A-220ENST00000593008 REC8O95072 547 aa11.46□□□□□ -0.57
DDX39A-220ENST00000593008 GDF11O95390 407 aa11.46□□□□□ -0.57
DDX39A-220ENST00000593008 CETPP11597 493 aa11.46□□□□□ -0.57
DDX39A-220ENST00000593008 PTPRAP18433 802 aa11.46□□□□□ -0.57
DDX39A-220ENST00000593008 SHMT1P34896 483 aa11.46□□□□□ -0.57
DDX39A-220ENST00000593008 HSPA4P34932 840 aa11.46□□□□□ -0.57
DDX39A-220ENST00000593008 GABPAQ06546 454 aa11.46□□□□□ -0.57
DDX39A-220ENST00000593008 CRACR2BQ8N4Y2 399 aaPredicted RBP11.46□□□□□ -0.57
DDX39A-220ENST00000593008 NACAP1Q9BZK3 213 aa11.46□□□□□ -0.57
DDX39A-220ENST00000593008 MCOLN1Q9GZU1 580 aa11.46□□□□□ -0.57
DDX39A-220ENST00000593008 PI4KBQ9UBF8 816 aa11.46□□□□□ -0.57
DDX39A-220ENST00000593008 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.46□□□□□ -0.57
DDX39A-220ENST00000593008 SNX14Q9Y5W7 946 aa11.46□□□□□ -0.57
DDX39A-220ENST00000593008 BTBD19C9JJ37 291 aa11.45□□□□□ -0.58
DDX39A-220ENST00000593008 TBC1D12O60347 775 aa11.45□□□□□ -0.58
DDX39A-220ENST00000593008 CTNND1O60716 968 aaKnown RBP11.45□□□□□ -0.58
DDX39A-220ENST00000593008 SBK1Q52WX2 424 aa11.45□□□□□ -0.58
DDX39A-220ENST00000593008 RRP12Q5JTH9 1297 aaKnown RBP11.45□□□□□ -0.58
DDX39A-220ENST00000593008 GIMAP6Q6P9H5 292 aa11.45□□□□□ -0.58
DDX39A-220ENST00000593008 CERS3Q8IU89 383 aa11.45□□□□□ -0.58
DDX39A-220ENST00000593008 ABHD8Q96I13 439 aa11.45□□□□□ -0.58
DDX39A-220ENST00000593008 TCEANC2Q96MN5 208 aa11.45□□□□□ -0.58
DDX39A-220ENST00000593008 TRIM34Q9BYJ4 488 aa11.45□□□□□ -0.58
DDX39A-220ENST00000593008 DHX36Q9H2U1 1008 aaKnown RBP11.45□□□□□ -0.58
DDX39A-220ENST00000593008 TRIM75PA6NK02 468 aa11.44□□□□□ -0.58
DDX39A-220ENST00000593008 E7EWF7 191 aa11.44□□□□□ -0.58
DDX39A-220ENST00000593008 NMT2O60551 498 aa11.44□□□□□ -0.58
DDX39A-220ENST00000593008 FKTNO75072 461 aa11.44□□□□□ -0.58
DDX39A-220ENST00000593008 HLA-DOAP06340 250 aa11.44□□□□□ -0.58
DDX39A-220ENST00000593008 AKR1B1P15121 316 aa11.44□□□□□ -0.58
DDX39A-220ENST00000593008 CDK8P49336 464 aa11.44□□□□□ -0.58
DDX39A-220ENST00000593008 TAF1CQ15572 869 aaPredicted RBP11.44□□□□□ -0.58
DDX39A-220ENST00000593008 FAM47AQ5JRC9 791 aa11.44□□□□□ -0.58
DDX39A-220ENST00000593008 C16orf86Q6ZW13 317 aa11.44□□□□□ -0.58
DDX39A-220ENST00000593008 CHST3Q7LGC8 479 aa11.44□□□□□ -0.58
DDX39A-220ENST00000593008 KIF2CQ99661 725 aa11.44□□□□□ -0.58
DDX39A-220ENST00000593008 CFHR5Q9BXR6 569 aa11.44□□□□□ -0.58
DDX39A-220ENST00000593008 GPHNQ9NQX3 736 aaPredicted RBP11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms