RNA–Protein interactions for RNA: ENST00000592083.5

ERCC1-214, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 5

Gene ERCC1, Length 938 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-214ENST00000592083 SYN1P17600 705 aa18.3■□□□□ 0.52
ERCC1-214ENST00000592083 PDE3AQ14432 1141 aa18.3■□□□□ 0.52
ERCC1-214ENST00000592083 DEFB123Q8N688 67 aa18.3■□□□□ 0.52
ERCC1-214ENST00000592083 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.3■□□□□ 0.52
ERCC1-214ENST00000592083 CYP7A1P22680 504 aa18.29■□□□□ 0.52
ERCC1-214ENST00000592083 BMP8BP34820 402 aa18.29■□□□□ 0.52
ERCC1-214ENST00000592083 DYNLL1P63167 89 aaKnown RBP18.29■□□□□ 0.52
ERCC1-214ENST00000592083 TRIM32Q13049 653 aa18.29■□□□□ 0.52
ERCC1-214ENST00000592083 TREML2Q5T2D2 321 aa18.29■□□□□ 0.52
ERCC1-214ENST00000592083 MAPKAPK5Q8IW41 473 aa18.29■□□□□ 0.52
ERCC1-214ENST00000592083 TGFBRAP1Q8WUH2 860 aa18.29■□□□□ 0.52
ERCC1-214ENST00000592083 COA7Q96BR5 231 aa18.29■□□□□ 0.52
ERCC1-214ENST00000592083 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.29■□□□□ 0.52
ERCC1-214ENST00000592083 SLC45A1Q9Y2W3 748 aa18.29■□□□□ 0.52
ERCC1-214ENST00000592083 CTNND1O60716 968 aaKnown RBP18.28■□□□□ 0.52
ERCC1-214ENST00000592083 MNX1P50219 401 aaPredicted RBP18.28■□□□□ 0.52
ERCC1-214ENST00000592083 PPP4CP60510 307 aa18.28■□□□□ 0.52
ERCC1-214ENST00000592083 CLASRPQ8N2M8 674 aaKnown RBP18.28■□□□□ 0.52
ERCC1-214ENST00000592083 MAGEB6Q8N7X4 407 aa18.28■□□□□ 0.52
ERCC1-214ENST00000592083 KIF1BPQ96EK5 621 aa18.28■□□□□ 0.52
ERCC1-214ENST00000592083 CHMP4BQ9H444 224 aaKnown RBP18.28■□□□□ 0.52
ERCC1-214ENST00000592083 TBC1D12O60347 775 aa18.27■□□□□ 0.52
ERCC1-214ENST00000592083 RRP1BQ14684 758 aaKnown RBP18.27■□□□□ 0.52
ERCC1-214ENST00000592083 MIGA1Q8NAN2 632 aa18.27■□□□□ 0.52
ERCC1-214ENST00000592083 DOCK1Q14185 1865 aa18.26■□□□□ 0.51
ERCC1-214ENST00000592083 CDK5RAP2Q96SN8 1893 aa18.26■□□□□ 0.51
ERCC1-214ENST00000592083 IFIT2P09913 472 aaKnown RBP18.26■□□□□ 0.51
ERCC1-214ENST00000592083 PLCG2P16885 1265 aa18.26■□□□□ 0.51
ERCC1-214ENST00000592083 CAPN2P17655 700 aa18.26■□□□□ 0.51
ERCC1-214ENST00000592083 SAP30BPQ9UHR5 308 aaKnown RBP18.26■□□□□ 0.51
ERCC1-214ENST00000592083 GJD2Q9UKL4 321 aa18.26■□□□□ 0.51
ERCC1-214ENST00000592083 AGTPBP1Q9UPW5 1226 aa18.26■□□□□ 0.51
ERCC1-214ENST00000592083 FLT1P17948 1338 aa18.25■□□□□ 0.51
ERCC1-214ENST00000592083 RAB11FIP3O75154 756 aa18.25■□□□□ 0.51
ERCC1-214ENST00000592083 MAGEA10P43363 369 aaPredicted RBP18.25■□□□□ 0.51
ERCC1-214ENST00000592083 MTMR10Q9NXD2 777 aa18.25■□□□□ 0.51
ERCC1-214ENST00000592083 PALD1Q9ULE6 856 aa18.25■□□□□ 0.51
ERCC1-214ENST00000592083 COL2A1P02458 1487 aaPredicted RBP18.25■□□□□ 0.51
ERCC1-214ENST00000592083 CUL9Q8IWT3 2517 aa18.24■□□□□ 0.51
ERCC1-214ENST00000592083 MAP3K12Q12852 859 aa18.24■□□□□ 0.51
ERCC1-214ENST00000592083 DNAJC2Q99543 621 aaKnown RBP18.24■□□□□ 0.51
ERCC1-214ENST00000592083 NBPF3Q9H094 633 aa18.24■□□□□ 0.51
ERCC1-214ENST00000592083 HMX1Q9NP08 348 aaPredicted RBP18.24■□□□□ 0.51
ERCC1-214ENST00000592083 PI4KBQ9UBF8 816 aa18.24■□□□□ 0.51
ERCC1-214ENST00000592083 RPTORQ8N122 1335 aa18.23■□□□□ 0.51
ERCC1-214ENST00000592083 SIPA1L1O43166 1804 aa18.23■□□□□ 0.51
ERCC1-214ENST00000592083 GOLIM4O00461 696 aa18.23■□□□□ 0.51
ERCC1-214ENST00000592083 SMARCA5O60264 1052 aaPredicted RBP18.23■□□□□ 0.51
ERCC1-214ENST00000592083 PEX10O60683 326 aa18.23■□□□□ 0.51
ERCC1-214ENST00000592083 SPP2Q13103 211 aa18.23■□□□□ 0.51
ERCC1-214ENST00000592083 GPR153Q6NV75 609 aa18.23■□□□□ 0.51
ERCC1-214ENST00000592083 ANKLE1Q8NAG6 615 aa18.23■□□□□ 0.51
ERCC1-214ENST00000592083 EDC3Q96F86 508 aaKnown RBP18.23■□□□□ 0.51
ERCC1-214ENST00000592083 YTHDC1Q96MU7 727 aaKnown RBP18.23■□□□□ 0.51
ERCC1-214ENST00000592083 DHX36Q9H2U1 1008 aaKnown RBP18.23■□□□□ 0.51
ERCC1-214ENST00000592083 C11orf49Q9H6J7 331 aa18.23■□□□□ 0.51
ERCC1-214ENST00000592083 STXBP5LQ9Y2K9 1186 aa18.23■□□□□ 0.51
ERCC1-214ENST00000592083 FOCADQ5VW36 1801 aa18.23■□□□□ 0.51
ERCC1-214ENST00000592083 DDX60LQ5H9U9 1706 aaKnown RBP18.23■□□□□ 0.51
ERCC1-214ENST00000592083 PLXNB2O15031 1838 aa18.22■□□□□ 0.51
ERCC1-214ENST00000592083 IGSF3O75054 1194 aa18.22■□□□□ 0.51
ERCC1-214ENST00000592083 HMGCRP04035 888 aa18.22■□□□□ 0.51
ERCC1-214ENST00000592083 CAP2P40123 477 aa18.22■□□□□ 0.51
ERCC1-214ENST00000592083 FAM110CQ1W6H9 321 aa18.22■□□□□ 0.51
ERCC1-214ENST00000592083 LRIT3Q3SXY7 679 aa18.22■□□□□ 0.51
ERCC1-214ENST00000592083 HERC5Q9UII4 1024 aaKnown RBP18.22■□□□□ 0.51
ERCC1-214ENST00000592083 ATAD5Q96QE3 1844 aa18.21■□□□□ 0.51
ERCC1-214ENST00000592083 CYP2B6P20813 491 aa18.21■□□□□ 0.51
ERCC1-214ENST00000592083 USP5P45974 858 aa18.21■□□□□ 0.51
ERCC1-214ENST00000592083 JAG1P78504 1218 aa18.21■□□□□ 0.51
ERCC1-214ENST00000592083 SHROOM1Q2M3G4 852 aaPredicted RBP18.21■□□□□ 0.51
ERCC1-214ENST00000592083 SLC9C2Q5TAH2 1124 aa18.21■□□□□ 0.51
ERCC1-214ENST00000592083 TDHQ8IZJ6 230 aa18.21■□□□□ 0.51
ERCC1-214ENST00000592083 CRACR2BQ8N4Y2 399 aaPredicted RBP18.21■□□□□ 0.51
ERCC1-214ENST00000592083 UBE2OQ9C0C9 1292 aaKnown RBP18.21■□□□□ 0.51
ERCC1-214ENST00000592083 BOLA2Q9H3K6 86 aa18.21■□□□□ 0.51
ERCC1-214ENST00000592083 DNAJC18Q9H819 358 aa18.21■□□□□ 0.51
ERCC1-214ENST00000592083 PNMA3Q9UL41 463 aa18.21■□□□□ 0.51
ERCC1-214ENST00000592083 PDE6AP16499 860 aa18.2■□□□□ 0.5
ERCC1-214ENST00000592083 HMGCS2P54868 508 aa18.2■□□□□ 0.5
ERCC1-214ENST00000592083 TTF1Q15361 905 aaPredicted RBP18.2■□□□□ 0.5
ERCC1-214ENST00000592083 FOXP4Q8IVH2 680 aaPredicted RBP18.2■□□□□ 0.5
ERCC1-214ENST00000592083 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.2■□□□□ 0.5
ERCC1-214ENST00000592083 COL25A1Q9BXS0 654 aaPredicted RBP18.2■□□□□ 0.5
ERCC1-214ENST00000592083 TRIM34Q9BYJ4 488 aa18.2■□□□□ 0.5
ERCC1-214ENST00000592083 LRRCC1Q9C099 1032 aa18.2■□□□□ 0.5
ERCC1-214ENST00000592083 ASCC2Q9H1I8 757 aaPredicted RBP18.2■□□□□ 0.5
ERCC1-214ENST00000592083 OGDHLQ9ULD0 1010 aa18.2■□□□□ 0.5
ERCC1-214ENST00000592083 MYH1P12882 1939 aa18.19■□□□□ 0.5
ERCC1-214ENST00000592083 GDF11O95390 407 aa18.19■□□□□ 0.5
ERCC1-214ENST00000592083 GCLCP48506 637 aaPredicted RBP18.19■□□□□ 0.5
ERCC1-214ENST00000592083 SLFNL1Q499Z3 407 aa18.19■□□□□ 0.5
ERCC1-214ENST00000592083 PROCA1Q8NCQ7 364 aaPredicted RBP18.19■□□□□ 0.5
ERCC1-214ENST00000592083 ZNF280CQ8ND82 737 aa18.19■□□□□ 0.5
ERCC1-214ENST00000592083 TRIB2Q92519 343 aa18.19■□□□□ 0.5
ERCC1-214ENST00000592083 RIOK1Q9BRS2 568 aaKnown RBP18.19■□□□□ 0.5
ERCC1-214ENST00000592083 ZNF532Q9HCE3 1301 aa18.19■□□□□ 0.5
ERCC1-214ENST00000592083 MAGEB6P1A0A0J9YX57 407 aa18.18■□□□□ 0.5
ERCC1-214ENST00000592083 USP17L5A8MUK1 530 aa18.18■□□□□ 0.5
ERCC1-214ENST00000592083 HLA-DOAP06340 250 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms