RNA–Protein interactions for RNA: ENST00000581273.5

TVP23C-208, Transcript of trans-golgi network vesicle protein 23 homolog C, humanhuman

TSL 3

Gene TVP23C, Length 488 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23C-208ENST00000581273 UBXN6Q9BZV1 441 aa8.62□□□□□ -1.03
TVP23C-208ENST00000581273 ZSCAN16Q9H4T2 348 aaPredicted RBP8.62□□□□□ -1.03
TVP23C-208ENST00000581273 MBIPQ9NS73 344 aa8.62□□□□□ -1.03
TVP23C-208ENST00000581273 ORC3Q9UBD5 711 aaPredicted RBP8.62□□□□□ -1.03
TVP23C-208ENST00000581273 RRP15Q9Y3B9 282 aaKnown RBP8.62□□□□□ -1.03
TVP23C-208ENST00000581273 JRKLQ9Y4A0 524 aa8.62□□□□□ -1.03
TVP23C-208ENST00000581273 CYP46A1Q9Y6A2 500 aa8.62□□□□□ -1.03
TVP23C-208ENST00000581273 MAP3K15Q6ZN16 1313 aa8.61□□□□□ -1.03
TVP23C-208ENST00000581273 CCDC196A0A1B0GTZ2 297 aa8.61□□□□□ -1.03
TVP23C-208ENST00000581273 AP5Z1O43299 807 aa8.61□□□□□ -1.03
TVP23C-208ENST00000581273 CBFA2T2O43439 604 aa8.61□□□□□ -1.03
TVP23C-208ENST00000581273 RAD17O75943 681 aa8.61□□□□□ -1.03
TVP23C-208ENST00000581273 SMC2O95347 1197 aa8.61□□□□□ -1.03
TVP23C-208ENST00000581273 ZKSCAN1P17029 563 aaPredicted RBP8.61□□□□□ -1.03
TVP23C-208ENST00000581273 SFPQP23246 707 aaKnown RBP eCLIP8.61□□□□□ -1.03
TVP23C-208ENST00000581273 GJB2P29033 226 aa8.61□□□□□ -1.03
TVP23C-208ENST00000581273 PLA2G4AP47712 749 aa8.61□□□□□ -1.03
TVP23C-208ENST00000581273 GMPSP49915 693 aaPredicted RBP8.61□□□□□ -1.03
TVP23C-208ENST00000581273 ZNF157P51786 506 aaPredicted RBP8.61□□□□□ -1.03
TVP23C-208ENST00000581273 DNM1Q05193 864 aaKnown RBP8.61□□□□□ -1.03
TVP23C-208ENST00000581273 LRMPQ12912 555 aa8.61□□□□□ -1.03
TVP23C-208ENST00000581273 TRDNQ13061 729 aa8.61□□□□□ -1.03
TVP23C-208ENST00000581273 CRY2Q49AN0 593 aa8.61□□□□□ -1.03
TVP23C-208ENST00000581273 LARP1BQ659C4 914 aaKnown RBP8.61□□□□□ -1.03
TVP23C-208ENST00000581273 SYT10Q6XYQ8 523 aa8.61□□□□□ -1.03
TVP23C-208ENST00000581273 BICD2Q8TD16 824 aa8.61□□□□□ -1.03
TVP23C-208ENST00000581273 CEP89Q96ST8 783 aa8.61□□□□□ -1.03
TVP23C-208ENST00000581273 ALDH8A1Q9H2A2 487 aaPredicted RBP8.61□□□□□ -1.03
TVP23C-208ENST00000581273 PRO3102Q9H379 93 aa8.61□□□□□ -1.03
TVP23C-208ENST00000581273 ADARB2Q9NS39 739 aaKnown RBP8.61□□□□□ -1.03
TVP23C-208ENST00000581273 HDAC5Q9UQL6 1122 aa8.61□□□□□ -1.03
TVP23C-208ENST00000581273 EYSQ5T1H1 3165 aa8.61□□□□□ -1.03
TVP23C-208ENST00000581273 UBN2Q6ZU65 1347 aa8.6□□□□□ -1.03
TVP23C-208ENST00000581273 VPS37CA5D8V6 355 aaPredicted RBP8.6□□□□□ -1.03
TVP23C-208ENST00000581273 CPP00450 1065 aa8.6□□□□□ -1.03
TVP23C-208ENST00000581273 ATP2B1P20020 1258 aa8.6□□□□□ -1.03
TVP23C-208ENST00000581273 OAS2P29728 719 aaKnown RBP8.6□□□□□ -1.03
TVP23C-208ENST00000581273 HOXA10P31260 410 aaPredicted RBP8.6□□□□□ -1.03
TVP23C-208ENST00000581273 ETF1P62495 437 aaKnown RBP8.6□□□□□ -1.03
TVP23C-208ENST00000581273 CXCL9Q07325 125 aa8.6□□□□□ -1.03
TVP23C-208ENST00000581273 SMC1AQ14683 1233 aaKnown RBP8.6□□□□□ -1.03
TVP23C-208ENST00000581273 CCDC73Q6ZRK6 1079 aa8.6□□□□□ -1.03
TVP23C-208ENST00000581273 HOMER1Q86YM7 354 aa8.6□□□□□ -1.03
TVP23C-208ENST00000581273 EFCAB13Q8IY85 973 aa8.6□□□□□ -1.03
TVP23C-208ENST00000581273 C10orf67Q8IYJ2 551 aa8.6□□□□□ -1.03
TVP23C-208ENST00000581273 RABGGTAQ92696 567 aa8.6□□□□□ -1.03
TVP23C-208ENST00000581273 GTF3C6Q969F1 213 aa8.6□□□□□ -1.03
TVP23C-208ENST00000581273 RILPL2Q969X0 211 aa8.6□□□□□ -1.03
TVP23C-208ENST00000581273 CRAMP1Q96RY5 1269 aa8.6□□□□□ -1.03
TVP23C-208ENST00000581273 BPIFA3Q9BQP9 254 aa8.6□□□□□ -1.03
TVP23C-208ENST00000581273 THUMPD2Q9BTF0 503 aaKnown RBP8.6□□□□□ -1.03
TVP23C-208ENST00000581273 PDRG1Q9NUG6 133 aa8.6□□□□□ -1.03
TVP23C-208ENST00000581273 RBM28Q9NW13 759 aaKnown RBP8.6□□□□□ -1.03
TVP23C-208ENST00000581273 GPRC5DQ9NZD1 345 aa8.6□□□□□ -1.03
TVP23C-208ENST00000581273 SALL3Q9BXA9 1300 aa8.59□□□□□ -1.03
TVP23C-208ENST00000581273 CCDC151A5D8V7 595 aa8.59□□□□□ -1.03
TVP23C-208ENST00000581273 ERVV-1B6SEH8 477 aa8.59□□□□□ -1.03
TVP23C-208ENST00000581273 GPR25O00155 361 aa8.59□□□□□ -1.03
TVP23C-208ENST00000581273 SGSM2O43147 1006 aa8.59□□□□□ -1.03
TVP23C-208ENST00000581273 MCM3P25205 808 aa8.59□□□□□ -1.03
TVP23C-208ENST00000581273 AK2P54819 239 aa8.59□□□□□ -1.03
TVP23C-208ENST00000581273 CCZ1BP86790 482 aa8.59□□□□□ -1.03
TVP23C-208ENST00000581273 CCZ1P86791 482 aaPredicted RBP8.59□□□□□ -1.03
TVP23C-208ENST00000581273 PDIA6Q15084 440 aa8.59□□□□□ -1.03
TVP23C-208ENST00000581273 ERCC6LQ2NKX8 1250 aa8.59□□□□□ -1.03
TVP23C-208ENST00000581273 FOXD4L6Q3SYB3 417 aaPredicted RBP8.59□□□□□ -1.03
TVP23C-208ENST00000581273 GRIPAP1Q4V328 841 aa8.59□□□□□ -1.03
TVP23C-208ENST00000581273 HSP90B2PQ58FF3 399 aa8.59□□□□□ -1.03
TVP23C-208ENST00000581273 MCTP2Q6DN12 878 aa8.59□□□□□ -1.03
TVP23C-208ENST00000581273 DPP8Q6V1X1 898 aaPredicted RBP8.59□□□□□ -1.03
TVP23C-208ENST00000581273 FOXD4L3Q6VB84 417 aaPredicted RBP8.59□□□□□ -1.03
TVP23C-208ENST00000581273 NOL8Q76FK4 1167 aaKnown RBP8.59□□□□□ -1.03
TVP23C-208ENST00000581273 CCDC102AQ96A19 550 aa8.59□□□□□ -1.03
TVP23C-208ENST00000581273 GPATCH3Q96I76 525 aa8.59□□□□□ -1.03
TVP23C-208ENST00000581273 NLRP3Q96P20 1036 aa8.59□□□□□ -1.03
TVP23C-208ENST00000581273 UPF3BQ9BZI7 483 aaKnown RBP8.59□□□□□ -1.03
TVP23C-208ENST00000581273 ZNF446Q9NWS9 450 aa8.59□□□□□ -1.03
TVP23C-208ENST00000581273 DACT1Q9NYF0 836 aa8.59□□□□□ -1.03
TVP23C-208ENST00000581273 ZNRF3Q9ULT6 936 aa8.59□□□□□ -1.03
TVP23C-208ENST00000581273 SNED1Q8TER0 1413 aa8.59□□□□□ -1.03
TVP23C-208ENST00000581273 TTC28Q96AY4 2481 aa8.59□□□□□ -1.03
TVP23C-208ENST00000581273 AK9Q5TCS8 1911 aa8.58□□□□□ -1.04
TVP23C-208ENST00000581273 LAMB2P55268 1798 aa8.58□□□□□ -1.04
TVP23C-208ENST00000581273 KDM3BQ7LBC6 1761 aa8.58□□□□□ -1.04
TVP23C-208ENST00000581273 A0A087WUV0 522 aaPredicted RBP8.58□□□□□ -1.04
TVP23C-208ENST00000581273 SHTN1A0MZ66 631 aa8.58□□□□□ -1.04
TVP23C-208ENST00000581273 SPDYE16A6NNV3 312 aaPredicted RBP8.58□□□□□ -1.04
TVP23C-208ENST00000581273 A6NNZ2 444 aa8.58□□□□□ -1.04
TVP23C-208ENST00000581273 POLR3GO15318 223 aaPredicted RBP8.58□□□□□ -1.04
TVP23C-208ENST00000581273 KINO60870 393 aaKnown RBP8.58□□□□□ -1.04
TVP23C-208ENST00000581273 NTSR2O95665 410 aa8.58□□□□□ -1.04
TVP23C-208ENST00000581273 CCDC172P0C7W6 258 aa8.58□□□□□ -1.04
TVP23C-208ENST00000581273 EIF2S2P20042 333 aaKnown RBP8.58□□□□□ -1.04
TVP23C-208ENST00000581273 ATP8B2P98198 1209 aa8.58□□□□□ -1.04
TVP23C-208ENST00000581273 TUBB8Q3ZCM7 444 aa8.58□□□□□ -1.04
TVP23C-208ENST00000581273 MMS22LQ6ZRQ5 1243 aa8.58□□□□□ -1.04
TVP23C-208ENST00000581273 HDXQ7Z353 690 aa8.58□□□□□ -1.04
TVP23C-208ENST00000581273 PPP1R42Q7Z4L9 355 aa8.58□□□□□ -1.04
TVP23C-208ENST00000581273 ERC1Q8IUD2 1116 aa8.58□□□□□ -1.04
TVP23C-208ENST00000581273 OTUD7AQ8TE49 926 aaPredicted RBP8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms