RNA–Protein interactions for RNA: ENST00000581160.5

CDK5RAP3-220, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 490 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-220ENST00000581160 KDM4AO75164 1064 aa10.81□□□□□ -0.68
CDK5RAP3-220ENST00000581160 RPS6KB1P23443 525 aa10.81□□□□□ -0.68
CDK5RAP3-220ENST00000581160 YY1P25490 414 aa10.81□□□□□ -0.68
CDK5RAP3-220ENST00000581160 DLK2Q6UY11 383 aa10.81□□□□□ -0.68
CDK5RAP3-220ENST00000581160 CYB5R4Q7L1T6 521 aa10.81□□□□□ -0.68
CDK5RAP3-220ENST00000581160 NEDD1Q8NHV4 660 aa10.81□□□□□ -0.68
CDK5RAP3-220ENST00000581160 ZNF341Q9BYN7 854 aa10.81□□□□□ -0.68
CDK5RAP3-220ENST00000581160 TSHZ2Q9NRE2 1034 aa10.81□□□□□ -0.68
CDK5RAP3-220ENST00000581160 TCP11L1Q9NUJ3 509 aa10.81□□□□□ -0.68
CDK5RAP3-220ENST00000581160 SIPA1L1O43166 1804 aa10.81□□□□□ -0.68
CDK5RAP3-220ENST00000581160 TSPY2A6NKD2 308 aa10.8□□□□□ -0.68
CDK5RAP3-220ENST00000581160 FAM196BA6NMK8 535 aa10.8□□□□□ -0.68
CDK5RAP3-220ENST00000581160 PRC1O43663 620 aa10.8□□□□□ -0.68
CDK5RAP3-220ENST00000581160 PPP1R12BO60237 982 aaPredicted RBP10.8□□□□□ -0.68
CDK5RAP3-220ENST00000581160 CTNND1O60716 968 aaKnown RBP10.8□□□□□ -0.68
CDK5RAP3-220ENST00000581160 USP2O75604 605 aaPredicted RBP10.8□□□□□ -0.68
CDK5RAP3-220ENST00000581160 ITGBL1O95965 494 aaPredicted RBP10.8□□□□□ -0.68
CDK5RAP3-220ENST00000581160 CPA1P15085 419 aa10.8□□□□□ -0.68
CDK5RAP3-220ENST00000581160 NF2P35240 595 aa10.8□□□□□ -0.68
CDK5RAP3-220ENST00000581160 NEK4P51957 841 aa10.8□□□□□ -0.68
CDK5RAP3-220ENST00000581160 ANTXR2P58335 489 aa10.8□□□□□ -0.68
CDK5RAP3-220ENST00000581160 COL9A3Q14050 684 aaPredicted RBP10.8□□□□□ -0.68
CDK5RAP3-220ENST00000581160 RRP1BQ14684 758 aaKnown RBP10.8□□□□□ -0.68
CDK5RAP3-220ENST00000581160 CCDC178Q5BJE1 867 aa10.8□□□□□ -0.68
CDK5RAP3-220ENST00000581160 FAM47AQ5JRC9 791 aa10.8□□□□□ -0.68
CDK5RAP3-220ENST00000581160 FBXL16Q8N461 479 aa10.8□□□□□ -0.68
CDK5RAP3-220ENST00000581160 TMEM87BQ96K49 555 aa10.8□□□□□ -0.68
CDK5RAP3-220ENST00000581160 UPF3BQ9BZI7 483 aaKnown RBP10.8□□□□□ -0.68
CDK5RAP3-220ENST00000581160 GINM1Q9NU53 330 aa10.8□□□□□ -0.68
CDK5RAP3-220ENST00000581160 PDRG1Q9NUG6 133 aa10.8□□□□□ -0.68
CDK5RAP3-220ENST00000581160 TSPY3P0CV98 308 aa10.79□□□□□ -0.68
CDK5RAP3-220ENST00000581160 TSPY8P0CW00 308 aa10.79□□□□□ -0.68
CDK5RAP3-220ENST00000581160 AKR1B1P15121 316 aa10.79□□□□□ -0.68
CDK5RAP3-220ENST00000581160 CAP2P40123 477 aa10.79□□□□□ -0.68
CDK5RAP3-220ENST00000581160 ABCB5Q2M3G0 1257 aa10.79□□□□□ -0.68
CDK5RAP3-220ENST00000581160 CHST3Q7LGC8 479 aa10.79□□□□□ -0.68
CDK5RAP3-220ENST00000581160 IQCA1Q86XH1 822 aa10.79□□□□□ -0.68
CDK5RAP3-220ENST00000581160 TMTC2Q8N394 836 aa10.79□□□□□ -0.68
CDK5RAP3-220ENST00000581160 IGDCC4Q8TDY8 1250 aa10.79□□□□□ -0.68
CDK5RAP3-220ENST00000581160 ANKS1AQ92625 1134 aa10.79□□□□□ -0.68
CDK5RAP3-220ENST00000581160 KLRG1Q96E93 195 aa10.79□□□□□ -0.68
CDK5RAP3-220ENST00000581160 TTC14Q96N46 770 aa10.79□□□□□ -0.68
CDK5RAP3-220ENST00000581160 ZSCAN10Q96SZ4 725 aaPredicted RBP10.79□□□□□ -0.68
CDK5RAP3-220ENST00000581160 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.79□□□□□ -0.68
CDK5RAP3-220ENST00000581160 CABP5Q9NP86 173 aa10.79□□□□□ -0.68
CDK5RAP3-220ENST00000581160 IL17RBQ9NRM6 502 aa10.79□□□□□ -0.68
CDK5RAP3-220ENST00000581160 IGKV6D-41A0A0C4DH26 115 aa10.78□□□□□ -0.68
CDK5RAP3-220ENST00000581160 TRAF5O00463 557 aa10.78□□□□□ -0.68
CDK5RAP3-220ENST00000581160 IFIT3O14879 490 aaKnown RBP10.78□□□□□ -0.68
CDK5RAP3-220ENST00000581160 LIFRP42702 1097 aa10.78□□□□□ -0.68
CDK5RAP3-220ENST00000581160 NOVP48745 357 aa10.78□□□□□ -0.68
CDK5RAP3-220ENST00000581160 JAG1P78504 1218 aa10.78□□□□□ -0.68
CDK5RAP3-220ENST00000581160 MAP3K9P80192 1104 aa10.78□□□□□ -0.68
CDK5RAP3-220ENST00000581160 SART3Q15020 963 aaKnown RBP10.78□□□□□ -0.68
CDK5RAP3-220ENST00000581160 ANKRD1Q15327 319 aa10.78□□□□□ -0.68
CDK5RAP3-220ENST00000581160 MAP3K11Q16584 847 aa10.78□□□□□ -0.68
CDK5RAP3-220ENST00000581160 PPP4R3BQ5MIZ7 849 aa10.78□□□□□ -0.68
CDK5RAP3-220ENST00000581160 Q6ZUG5 572 aa10.78□□□□□ -0.68
CDK5RAP3-220ENST00000581160 TMEM179Q6ZVK1 233 aa10.78□□□□□ -0.68
CDK5RAP3-220ENST00000581160 DGKHQ86XP1 1220 aa10.78□□□□□ -0.68
CDK5RAP3-220ENST00000581160 ZNF784Q8NCA9 323 aaPredicted RBP10.78□□□□□ -0.68
CDK5RAP3-220ENST00000581160 ZKSCAN3Q9BRR0 538 aa10.78□□□□□ -0.68
CDK5RAP3-220ENST00000581160 UBAC1Q9BSL1 405 aa10.78□□□□□ -0.68
CDK5RAP3-220ENST00000581160 AGXT2Q9BYV1 514 aa10.78□□□□□ -0.68
CDK5RAP3-220ENST00000581160 PLIN4Q96Q06 1357 aa10.77□□□□□ -0.68
CDK5RAP3-220ENST00000581160 SSC5DA1L4H1 1573 aa10.77□□□□□ -0.68
CDK5RAP3-220ENST00000581160 ERICH2A1L162 156 aa10.77□□□□□ -0.69
CDK5RAP3-220ENST00000581160 UNCXA6NJT0 531 aa10.77□□□□□ -0.69
CDK5RAP3-220ENST00000581160 MPHOSPH10O00566 681 aaKnown RBP10.77□□□□□ -0.69
CDK5RAP3-220ENST00000581160 SH2B2O14492 632 aaPredicted RBP10.77□□□□□ -0.69
CDK5RAP3-220ENST00000581160 ST18O60284 1047 aa10.77□□□□□ -0.69
CDK5RAP3-220ENST00000581160 TOMM70O94826 608 aa10.77□□□□□ -0.69
CDK5RAP3-220ENST00000581160 GDF11O95390 407 aa10.77□□□□□ -0.69
CDK5RAP3-220ENST00000581160 GH2P01242 217 aa10.77□□□□□ -0.69
CDK5RAP3-220ENST00000581160 GUCY1A2P33402 732 aa10.77□□□□□ -0.69
CDK5RAP3-220ENST00000581160 IREB2P48200 963 aaKnown RBP10.77□□□□□ -0.69
CDK5RAP3-220ENST00000581160 FKBP1BP68106 108 aa10.77□□□□□ -0.69
CDK5RAP3-220ENST00000581160 PRKG1Q13976 671 aa10.77□□□□□ -0.69
CDK5RAP3-220ENST00000581160 SEC23AQ15436 765 aa10.77□□□□□ -0.69
CDK5RAP3-220ENST00000581160 TMEM67Q5HYA8 995 aa10.77□□□□□ -0.69
CDK5RAP3-220ENST00000581160 NOL9Q5SY16 702 aaKnown RBP10.77□□□□□ -0.69
CDK5RAP3-220ENST00000581160 ARMC9Q7Z3E5 817 aa10.77□□□□□ -0.69
CDK5RAP3-220ENST00000581160 SMC1BQ8NDV3 1235 aa10.77□□□□□ -0.69
CDK5RAP3-220ENST00000581160 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.77□□□□□ -0.69
CDK5RAP3-220ENST00000581160 RBM46Q8TBY0 533 aaKnown RBP10.77□□□□□ -0.69
CDK5RAP3-220ENST00000581160 MKL1Q969V6 931 aa10.77□□□□□ -0.69
CDK5RAP3-220ENST00000581160 TCEANC2Q96MN5 208 aa10.77□□□□□ -0.69
CDK5RAP3-220ENST00000581160 LRRC2Q9BYS8 371 aa10.77□□□□□ -0.69
CDK5RAP3-220ENST00000581160 KANSL2Q9H9L4 492 aa10.77□□□□□ -0.69
CDK5RAP3-220ENST00000581160 MTMR4Q9NYA4 1195 aa10.77□□□□□ -0.69
CDK5RAP3-220ENST00000581160 ANGEL1Q9UNK9 670 aaKnown RBP10.77□□□□□ -0.69
CDK5RAP3-220ENST00000581160 NMT2O60551 498 aa10.76□□□□□ -0.69
CDK5RAP3-220ENST00000581160 ASNSP08243 561 aa10.76□□□□□ -0.69
CDK5RAP3-220ENST00000581160 INPP5BP32019 993 aa10.76□□□□□ -0.69
CDK5RAP3-220ENST00000581160 MCM2P49736 904 aa10.76□□□□□ -0.69
CDK5RAP3-220ENST00000581160 AK2P54819 239 aa10.76□□□□□ -0.69
CDK5RAP3-220ENST00000581160 EVCP57679 992 aa10.76□□□□□ -0.69
CDK5RAP3-220ENST00000581160 FGD1P98174 961 aa10.76□□□□□ -0.69
CDK5RAP3-220ENST00000581160 FMR1Q06787 632 aaKnown RBP eCLIP10.76□□□□□ -0.69
CDK5RAP3-220ENST00000581160 TOB2Q14106 344 aaPredicted RBP10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms