RNA–Protein interactions for RNA: ENST00000580986.1

CCDC47-203, Transcript of coiled-coil domain containing 47, humanhuman

TSL 4

Gene CCDC47, Length 552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-203ENST00000580986 CDCA5Q96FF9 252 aa12.36□□□□□ -0.43
CCDC47-203ENST00000580986 BACH2Q9BYV9 841 aa12.36□□□□□ -0.43
CCDC47-203ENST00000580986 RNF41Q9H4P4 317 aaPredicted RBP12.36□□□□□ -0.43
CCDC47-203ENST00000580986 MYH8P13535 1937 aa12.36□□□□□ -0.43
CCDC47-203ENST00000580986 ORC4O43929 436 aa12.35□□□□□ -0.43
CCDC47-203ENST00000580986 PPP1R12BO60237 982 aaPredicted RBP12.35□□□□□ -0.43
CCDC47-203ENST00000580986 CYP21A2P08686 494 aa12.35□□□□□ -0.43
CCDC47-203ENST00000580986 HSPA4P34932 840 aa12.35□□□□□ -0.43
CCDC47-203ENST00000580986 ANAPC15P60006 121 aa12.35□□□□□ -0.43
CCDC47-203ENST00000580986 PDE4BQ07343 736 aa12.35□□□□□ -0.43
CCDC47-203ENST00000580986 NBPF12Q5TAG4 269 aaPredicted RBP12.35□□□□□ -0.43
CCDC47-203ENST00000580986 TATDN1Q6P1N9 297 aa12.35□□□□□ -0.43
CCDC47-203ENST00000580986 CCDC17Q96LX7 622 aa12.35□□□□□ -0.43
CCDC47-203ENST00000580986 SAP30BPQ9UHR5 308 aaKnown RBP12.35□□□□□ -0.43
CCDC47-203ENST00000580986 ZNF112Q9UJU3 913 aa12.35□□□□□ -0.43
CCDC47-203ENST00000580986 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.35□□□□□ -0.43
CCDC47-203ENST00000580986 GREB1LQ9C091 1923 aaPredicted RBP12.35□□□□□ -0.43
CCDC47-203ENST00000580986 PLIN4Q96Q06 1357 aa12.34□□□□□ -0.43
CCDC47-203ENST00000580986 ZKSCAN1P17029 563 aaPredicted RBP12.34□□□□□ -0.43
CCDC47-203ENST00000580986 MCCP23508 829 aa12.34□□□□□ -0.43
CCDC47-203ENST00000580986 KRT32Q14532 448 aa12.34□□□□□ -0.43
CCDC47-203ENST00000580986 AKNAD1Q5T1N1 836 aa12.34□□□□□ -0.43
CCDC47-203ENST00000580986 CREB3L3Q68CJ9 461 aa12.34□□□□□ -0.43
CCDC47-203ENST00000580986 CDAN1Q8IWY9 1227 aa12.34□□□□□ -0.43
CCDC47-203ENST00000580986 CRACR2BQ8N4Y2 399 aaPredicted RBP12.34□□□□□ -0.43
CCDC47-203ENST00000580986 IL27Q8NEV9 243 aa12.34□□□□□ -0.43
CCDC47-203ENST00000580986 ZNF341Q9BYN7 854 aa12.34□□□□□ -0.43
CCDC47-203ENST00000580986 NBPF3Q9H094 633 aa12.34□□□□□ -0.43
CCDC47-203ENST00000580986 DNAJC18Q9H819 358 aa12.34□□□□□ -0.43
CCDC47-203ENST00000580986 CNNM2Q9H8M5 875 aa12.34□□□□□ -0.43
CCDC47-203ENST00000580986 UPF2Q9HAU5 1272 aaKnown RBP12.34□□□□□ -0.43
CCDC47-203ENST00000580986 OTOFQ9HC10 1997 aa12.34□□□□□ -0.43
CCDC47-203ENST00000580986 DOCK1Q14185 1865 aa12.34□□□□□ -0.43
CCDC47-203ENST00000580986 PHF20L1A8MW92 1017 aa12.33□□□□□ -0.44
CCDC47-203ENST00000580986 MINDY4BA8MYZ0 360 aa12.33□□□□□ -0.44
CCDC47-203ENST00000580986 SLC27A2O14975 620 aa12.33□□□□□ -0.44
CCDC47-203ENST00000580986 CYP2D6P10635 497 aa12.33□□□□□ -0.44
CCDC47-203ENST00000580986 SHMT1P34896 483 aa12.33□□□□□ -0.44
CCDC47-203ENST00000580986 CDK8P49336 464 aa12.33□□□□□ -0.44
CCDC47-203ENST00000580986 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.33□□□□□ -0.44
CCDC47-203ENST00000580986 KLRG1Q96E93 195 aa12.33□□□□□ -0.44
CCDC47-203ENST00000580986 TRIM34Q9BYJ4 488 aa12.33□□□□□ -0.44
CCDC47-203ENST00000580986 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.33□□□□□ -0.44
CCDC47-203ENST00000580986 ATAD5Q96QE3 1844 aa12.32□□□□□ -0.44
CCDC47-203ENST00000580986 CYP2D7A0A087X1C5 515 aa12.32□□□□□ -0.44
CCDC47-203ENST00000580986 CTNND1O60716 968 aaKnown RBP12.32□□□□□ -0.44
CCDC47-203ENST00000580986 IREB2P48200 963 aaKnown RBP12.32□□□□□ -0.44
CCDC47-203ENST00000580986 RBM25P49756 843 aaKnown RBP12.32□□□□□ -0.44
CCDC47-203ENST00000580986 IRX5P78411 483 aaPredicted RBP12.32□□□□□ -0.44
CCDC47-203ENST00000580986 NOL9Q5SY16 702 aaKnown RBP12.32□□□□□ -0.44
CCDC47-203ENST00000580986 MFSD6Q6ZSS7 791 aa12.32□□□□□ -0.44
CCDC47-203ENST00000580986 ARMC9Q7Z3E5 817 aa12.32□□□□□ -0.44
CCDC47-203ENST00000580986 TBC1D10CQ8IV04 446 aa12.32□□□□□ -0.44
CCDC47-203ENST00000580986 MTA3Q9BTC8 594 aa12.32□□□□□ -0.44
CCDC47-203ENST00000580986 TBC1D2Q9BYX2 928 aa12.32□□□□□ -0.44
CCDC47-203ENST00000580986 KRT23Q9C075 422 aa12.32□□□□□ -0.44
CCDC47-203ENST00000580986 SCAF8Q9UPN6 1271 aaKnown RBP12.32□□□□□ -0.44
CCDC47-203ENST00000580986 TRAF5O00463 557 aa12.31□□□□□ -0.44
CCDC47-203ENST00000580986 USP2O75604 605 aaPredicted RBP12.31□□□□□ -0.44
CCDC47-203ENST00000580986 ASNSP08243 561 aa12.31□□□□□ -0.44
CCDC47-203ENST00000580986 HMGB1P09429 215 aaKnown RBP12.31□□□□□ -0.44
CCDC47-203ENST00000580986 RASA1P20936 1047 aa12.31□□□□□ -0.44
CCDC47-203ENST00000580986 CAP2P40123 477 aa12.31□□□□□ -0.44
CCDC47-203ENST00000580986 TRDNQ13061 729 aa12.31□□□□□ -0.44
CCDC47-203ENST00000580986 PPP4R3BQ5MIZ7 849 aa12.31□□□□□ -0.44
CCDC47-203ENST00000580986 LDLRAD1Q5T700 205 aa12.31□□□□□ -0.44
CCDC47-203ENST00000580986 ANKRD13AQ8IZ07 590 aa12.31□□□□□ -0.44
CCDC47-203ENST00000580986 ESR2Q92731 530 aa12.31□□□□□ -0.44
CCDC47-203ENST00000580986 HHIPL1Q96JK4 782 aa12.31□□□□□ -0.44
CCDC47-203ENST00000580986 MKNK2Q9HBH9 465 aa12.31□□□□□ -0.44
CCDC47-203ENST00000580986 GBA2Q9HCG7 927 aaPredicted RBP12.31□□□□□ -0.44
CCDC47-203ENST00000580986 WDR19Q8NEZ3 1342 aa12.31□□□□□ -0.44
CCDC47-203ENST00000580986 E7EWF7 191 aa12.3□□□□□ -0.44
CCDC47-203ENST00000580986 CELF2O95319 508 aaKnown RBP12.3□□□□□ -0.44
CCDC47-203ENST00000580986 HAND2P61296 217 aa12.3□□□□□ -0.44
CCDC47-203ENST00000580986 CTDSPL2Q05D32 466 aa12.3□□□□□ -0.44
CCDC47-203ENST00000580986 CERKLQ49MI3 558 aaPredicted RBP12.3□□□□□ -0.44
CCDC47-203ENST00000580986 PRAMEF18Q5VWM3 479 aa12.3□□□□□ -0.44
CCDC47-203ENST00000580986 CST9Q5W186 159 aa12.3□□□□□ -0.44
CCDC47-203ENST00000580986 TMEM179Q6ZVK1 233 aa12.3□□□□□ -0.44
CCDC47-203ENST00000580986 MIGA2Q7L4E1 593 aa12.3□□□□□ -0.44
CCDC47-203ENST00000580986 C2orf69Q8N8R5 385 aa12.3□□□□□ -0.44
CCDC47-203ENST00000580986 NCOA7Q8NI08 942 aa12.3□□□□□ -0.44
CCDC47-203ENST00000580986 DYNLL2Q96FJ2 89 aa12.3□□□□□ -0.44
CCDC47-203ENST00000580986 WRNIP1Q96S55 665 aa12.3□□□□□ -0.44
CCDC47-203ENST00000580986 TM6SF1Q9BZW5 370 aa12.3□□□□□ -0.44
CCDC47-203ENST00000580986 TCP11L1Q9NUJ3 509 aa12.3□□□□□ -0.44
CCDC47-203ENST00000580986 SYNPO2Q9UMS6 1093 aa12.3□□□□□ -0.44
CCDC47-203ENST00000580986 PCDHB8Q9UN66 801 aa12.3□□□□□ -0.44
CCDC47-203ENST00000580986 SMIM22K7EJ46 135 aa12.29□□□□□ -0.44
CCDC47-203ENST00000580986 PSMA5P28066 241 aa12.29□□□□□ -0.44
CCDC47-203ENST00000580986 NOVP48745 357 aa12.29□□□□□ -0.44
CCDC47-203ENST00000580986 MAP3K9P80192 1104 aa12.29□□□□□ -0.44
CCDC47-203ENST00000580986 SLC4A8Q2Y0W8 1093 aa12.29□□□□□ -0.44
CCDC47-203ENST00000580986 CCDC178Q5BJE1 867 aa12.29□□□□□ -0.44
CCDC47-203ENST00000580986 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.29□□□□□ -0.44
CCDC47-203ENST00000580986 RALYLQ86SE5 291 aaKnown RBP12.29□□□□□ -0.44
CCDC47-203ENST00000580986 SCYL3Q8IZE3 742 aa12.29□□□□□ -0.44
CCDC47-203ENST00000580986 ZNF444Q8N0Y2 327 aaPredicted RBP12.29□□□□□ -0.44
CCDC47-203ENST00000580986 FBXL16Q8N461 479 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms