RNA–Protein interactions for RNA: ENST00000576222.1

PCDHGB3-201, Transcript of protocadherin gamma subfamily B, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGB3, Length 4,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3-201ENST00000576222 TRIM58Q8NG06 486 aa14.67□□□□□ -0.06
PCDHGB3-201ENST00000576222 IFIH1Q9BYX4 1025 aaKnown RBP14.67□□□□□ -0.06
PCDHGB3-201ENST00000576222 ABCB6Q9NP58 842 aa14.67□□□□□ -0.06
PCDHGB3-201ENST00000576222 PPANQ9NQ55 473 aaKnown RBP14.67□□□□□ -0.06
PCDHGB3-201ENST00000576222 ST7Q9NRC1 585 aa14.67□□□□□ -0.06
PCDHGB3-201ENST00000576222 MYO1AQ9UBC5 1043 aa14.67□□□□□ -0.06
PCDHGB3-201ENST00000576222 KDRP35968 1356 aa14.67□□□□□ -0.06
PCDHGB3-201ENST00000576222 MAGEA9P43362 315 aa14.67□□□□□ -0.06
PCDHGB3-201ENST00000576222 ICE2Q659A1 982 aa14.67□□□□□ -0.06
PCDHGB3-201ENST00000576222 KCNJ18B7U540 433 aa14.67□□□□□ -0.06
PCDHGB3-201ENST00000576222 BUB1BO60566 1050 aaPredicted RBP14.67□□□□□ -0.06
PCDHGB3-201ENST00000576222 PPP6R2O75170 966 aa14.67□□□□□ -0.06
PCDHGB3-201ENST00000576222 KCNJ12Q14500 433 aa14.67□□□□□ -0.06
PCDHGB3-201ENST00000576222 E2F4Q16254 413 aa14.67□□□□□ -0.06
PCDHGB3-201ENST00000576222 CDC5LQ99459 802 aaKnown RBP14.67□□□□□ -0.06
PCDHGB3-201ENST00000576222 MTRF1LQ9UGC7 380 aaKnown RBP14.67□□□□□ -0.06
PCDHGB3-201ENST00000576222 MAGEB6P1A0A0J9YX57 407 aa14.66□□□□□ -0.06
PCDHGB3-201ENST00000576222 BTBD18B2RXH4 712 aa14.66□□□□□ -0.06
PCDHGB3-201ENST00000576222 RAPGEF1Q13905 1077 aa14.66□□□□□ -0.06
PCDHGB3-201ENST00000576222 CCDC77Q9BR77 488 aa14.66□□□□□ -0.06
PCDHGB3-201ENST00000576222 PLVAPQ9BX97 442 aa14.66□□□□□ -0.06
PCDHGB3-201ENST00000576222 DBNLQ9UJU6 430 aaKnown RBP14.66□□□□□ -0.06
PCDHGB3-201ENST00000576222 PRDM4Q9UKN5 801 aa14.66□□□□□ -0.06
PCDHGB3-201ENST00000576222 TNRQ92752 1358 aa14.66□□□□□ -0.06
PCDHGB3-201ENST00000576222 ERCC5P28715 1186 aaPredicted RBP14.66□□□□□ -0.06
PCDHGB3-201ENST00000576222 KRT79Q5XKE5 535 aa14.66□□□□□ -0.06
PCDHGB3-201ENST00000576222 KLHL7Q8IXQ5 586 aa14.66□□□□□ -0.06
PCDHGB3-201ENST00000576222 PLEKHA4Q9H4M7 779 aa14.66□□□□□ -0.06
PCDHGB3-201ENST00000576222 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.66□□□□□ -0.06
PCDHGB3-201ENST00000576222 UGGT1Q9NYU2 1555 aa14.66□□□□□ -0.06
PCDHGB3-201ENST00000576222 CYP2C19P33261 490 aa14.66□□□□□ -0.06
PCDHGB3-201ENST00000576222 ZAP70P43403 619 aa14.66□□□□□ -0.06
PCDHGB3-201ENST00000576222 TBC1D5Q92609 795 aa14.66□□□□□ -0.06
PCDHGB3-201ENST00000576222 BAIAP2L1Q9UHR4 511 aa14.66□□□□□ -0.06
PCDHGB3-201ENST00000576222 PPFIA4O75335 1185 aa14.66□□□□□ -0.06
PCDHGB3-201ENST00000576222 HOOK3Q86VS8 718 aa14.66□□□□□ -0.06
PCDHGB3-201ENST00000576222 SMARCC2Q8TAQ2 1214 aa14.66□□□□□ -0.06
PCDHGB3-201ENST00000576222 HINFPQ9BQA5 517 aa14.66□□□□□ -0.06
PCDHGB3-201ENST00000576222 ZNF652Q9Y2D9 606 aa14.66□□□□□ -0.06
PCDHGB3-201ENST00000576222 NUTM2BA6NNL0 878 aaPredicted RBP14.65□□□□□ -0.06
PCDHGB3-201ENST00000576222 NUTM2EB1AL46 878 aaPredicted RBP14.65□□□□□ -0.06
PCDHGB3-201ENST00000576222 FGAP02671 866 aa14.65□□□□□ -0.06
PCDHGB3-201ENST00000576222 RBL2Q08999 1139 aa14.65□□□□□ -0.06
PCDHGB3-201ENST00000576222 TOB2Q14106 344 aaPredicted RBP14.65□□□□□ -0.06
PCDHGB3-201ENST00000576222 MORC3Q14149 939 aa14.65□□□□□ -0.06
PCDHGB3-201ENST00000576222 PAXIP1Q6ZW49 1069 aaPredicted RBP14.65□□□□□ -0.06
PCDHGB3-201ENST00000576222 TSKSQ9UJT2 592 aa14.65□□□□□ -0.06
PCDHGB3-201ENST00000576222 RPAP1Q9BWH6 1393 aaPredicted RBP14.65□□□□□ -0.06
PCDHGB3-201ENST00000576222 MPHOSPH10O00566 681 aaKnown RBP14.65□□□□□ -0.06
PCDHGB3-201ENST00000576222 ENC1O14682 589 aa14.65□□□□□ -0.06
PCDHGB3-201ENST00000576222 NBPF14Q5TI25 921 aa14.65□□□□□ -0.06
PCDHGB3-201ENST00000576222 BANK1Q8NDB2 785 aa14.65□□□□□ -0.06
PCDHGB3-201ENST00000576222 IFT74Q96LB3 600 aa14.65□□□□□ -0.06
PCDHGB3-201ENST00000576222 ZMYM6O95789 1325 aa14.65□□□□□ -0.06
PCDHGB3-201ENST00000576222 PLEKHG3A1L390 1219 aa14.65□□□□□ -0.06
PCDHGB3-201ENST00000576222 SOWAHDA6NJG2 315 aa14.65□□□□□ -0.06
PCDHGB3-201ENST00000576222 ANKRD65E5RJM6 399 aa14.65□□□□□ -0.06
PCDHGB3-201ENST00000576222 TRAF5O00463 557 aa14.65□□□□□ -0.06
PCDHGB3-201ENST00000576222 GPIHBP1Q8IV16 184 aa14.65□□□□□ -0.06
PCDHGB3-201ENST00000576222 KIF23Q02241 960 aaPredicted RBP14.64□□□□□ -0.07
PCDHGB3-201ENST00000576222 CHRNA2Q15822 529 aa14.64□□□□□ -0.07
PCDHGB3-201ENST00000576222 SLC9C1Q4G0N8 1177 aa14.64□□□□□ -0.07
PCDHGB3-201ENST00000576222 C6orf163Q5TEZ5 329 aa14.64□□□□□ -0.07
PCDHGB3-201ENST00000576222 TTC19Q6DKK2 380 aaPredicted RBP14.64□□□□□ -0.07
PCDHGB3-201ENST00000576222 C6orf50Q9HD87 102 aa14.64□□□□□ -0.07
PCDHGB3-201ENST00000576222 KCNK9Q9NPC2 374 aa14.64□□□□□ -0.07
PCDHGB3-201ENST00000576222 TSPY3P0CV98 308 aa14.64□□□□□ -0.07
PCDHGB3-201ENST00000576222 TSPY8P0CW00 308 aa14.64□□□□□ -0.07
PCDHGB3-201ENST00000576222 GUCY2FP51841 1108 aa14.64□□□□□ -0.07
PCDHGB3-201ENST00000576222 TYW1BQ6NUM6 668 aa14.64□□□□□ -0.07
PCDHGB3-201ENST00000576222 ENOX1Q8TC92 643 aaKnown RBP14.64□□□□□ -0.07
PCDHGB3-201ENST00000576222 ARMT1Q9H993 441 aa14.64□□□□□ -0.07
PCDHGB3-201ENST00000576222 COPRSQ9NQ92 184 aa14.64□□□□□ -0.07
PCDHGB3-201ENST00000576222 MED14O60244 1454 aa14.64□□□□□ -0.07
PCDHGB3-201ENST00000576222 ZMYND10O75800 440 aa14.64□□□□□ -0.07
PCDHGB3-201ENST00000576222 TCP1P17987 556 aaKnown RBP14.64□□□□□ -0.07
PCDHGB3-201ENST00000576222 CNNM4Q6P4Q7 775 aa14.64□□□□□ -0.07
PCDHGB3-201ENST00000576222 SV2BQ7L1I2 683 aa14.64□□□□□ -0.07
PCDHGB3-201ENST00000576222 CCDC25Q86WR0 208 aa14.64□□□□□ -0.07
PCDHGB3-201ENST00000576222 EPC1Q9H2F5 836 aa14.64□□□□□ -0.07
PCDHGB3-201ENST00000576222 HYOU1Q9Y4L1 999 aa14.64□□□□□ -0.07
PCDHGB3-201ENST00000576222 TBCAO75347 108 aaKnown RBP14.64□□□□□ -0.07
PCDHGB3-201ENST00000576222 MAP3K9P80192 1104 aa14.64□□□□□ -0.07
PCDHGB3-201ENST00000576222 CTDSPL2Q05D32 466 aa14.64□□□□□ -0.07
PCDHGB3-201ENST00000576222 VPS54Q9P1Q0 977 aa14.64□□□□□ -0.07
PCDHGB3-201ENST00000576222 CEP104O60308 925 aa14.63□□□□□ -0.07
PCDHGB3-201ENST00000576222 GCP02774 474 aa14.63□□□□□ -0.07
PCDHGB3-201ENST00000576222 SLFN14P0C7P3 912 aa14.63□□□□□ -0.07
PCDHGB3-201ENST00000576222 SARNPP82979 210 aaKnown RBP14.63□□□□□ -0.07
PCDHGB3-201ENST00000576222 CCDC84Q86UT8 332 aaPredicted RBP14.63□□□□□ -0.07
PCDHGB3-201ENST00000576222 C2CD5Q86YS7 1000 aa14.63□□□□□ -0.07
PCDHGB3-201ENST00000576222 DCAF5Q96JK2 942 aa14.63□□□□□ -0.07
PCDHGB3-201ENST00000576222 GOLPH3LQ9H4A5 285 aa14.63□□□□□ -0.07
PCDHGB3-201ENST00000576222 DNM2P50570 870 aa14.63□□□□□ -0.07
PCDHGB3-201ENST00000576222 PPP2R5BQ15173 497 aa14.63□□□□□ -0.07
PCDHGB3-201ENST00000576222 KRT71Q3SY84 523 aa14.63□□□□□ -0.07
PCDHGB3-201ENST00000576222 NBPF6Q5VWK0 638 aa14.63□□□□□ -0.07
PCDHGB3-201ENST00000576222 NBPF4Q96M43 638 aa14.63□□□□□ -0.07
PCDHGB3-201ENST00000576222 EIF3CLB5ME19 914 aaKnown RBP14.63□□□□□ -0.07
PCDHGB3-201ENST00000576222 CCDC152Q4G0S7 254 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 148.2 ms