RNA–Protein interactions for RNA: ENST00000568373.5

SMPD3-211, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,073 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-211ENST00000568373 RBM28Q9NW13 759 aaKnown RBP20.98■□□□□ 0.95
SMPD3-211ENST00000568373 ANKRD31Q8N7Z5 1873 aa20.98■□□□□ 0.95
SMPD3-211ENST00000568373 NDUFA8P51970 172 aa20.97■□□□□ 0.95
SMPD3-211ENST00000568373 C12orf60Q5U649 245 aa20.97■□□□□ 0.95
SMPD3-211ENST00000568373 NOSTRINQ8IVI9 506 aa20.97■□□□□ 0.95
SMPD3-211ENST00000568373 NLGN1Q8N2Q7 840 aa20.97■□□□□ 0.95
SMPD3-211ENST00000568373 AKT1S1Q96B36 256 aa20.97■□□□□ 0.95
SMPD3-211ENST00000568373 MAP3K14Q99558 947 aa20.97■□□□□ 0.95
SMPD3-211ENST00000568373 PPP6R2O75170 966 aa20.97■□□□□ 0.95
SMPD3-211ENST00000568373 CAVIN2O95810 425 aa20.97■□□□□ 0.95
SMPD3-211ENST00000568373 NT5C2P49902 561 aa20.97■□□□□ 0.95
SMPD3-211ENST00000568373 PTPAQ15257 358 aa20.97■□□□□ 0.95
SMPD3-211ENST00000568373 FAM47AQ5JRC9 791 aa20.97■□□□□ 0.95
SMPD3-211ENST00000568373 DIS3L2Q8IYB7 885 aaKnown RBP20.97■□□□□ 0.95
SMPD3-211ENST00000568373 FOXP1Q9H334 677 aaPredicted RBP20.97■□□□□ 0.95
SMPD3-211ENST00000568373 CBX8Q9HC52 389 aa20.97■□□□□ 0.95
SMPD3-211ENST00000568373 KCNJ14Q9UNX9 436 aa20.97■□□□□ 0.95
SMPD3-211ENST00000568373 CMA1P23946 247 aa20.96■□□□□ 0.95
SMPD3-211ENST00000568373 MSNP26038 577 aaKnown RBP20.96■□□□□ 0.95
SMPD3-211ENST00000568373 FUT2Q10981 343 aa20.96■□□□□ 0.95
SMPD3-211ENST00000568373 COL23A1Q86Y22 540 aaPredicted RBP20.96■□□□□ 0.95
SMPD3-211ENST00000568373 CERS3Q8IU89 383 aa20.96■□□□□ 0.95
SMPD3-211ENST00000568373 JMYQ8N9B5 988 aa20.96■□□□□ 0.95
SMPD3-211ENST00000568373 RTFDC1Q9BY42 306 aaPredicted RBP20.96■□□□□ 0.95
SMPD3-211ENST00000568373 NRXN2Q9P2S2 1712 aa20.96■□□□□ 0.95
SMPD3-211ENST00000568373 BTBD18B2RXH4 712 aa20.95■□□□□ 0.94
SMPD3-211ENST00000568373 PPEF1O14829 653 aaPredicted RBP20.95■□□□□ 0.94
SMPD3-211ENST00000568373 NMT2O60551 498 aa20.95■□□□□ 0.94
SMPD3-211ENST00000568373 PTMAP06454 111 aaKnown RBP20.95■□□□□ 0.94
SMPD3-211ENST00000568373 AKAP17AQ02040 695 aaKnown RBP20.95■□□□□ 0.94
SMPD3-211ENST00000568373 LUZP1Q86V48 1076 aa20.95■□□□□ 0.94
SMPD3-211ENST00000568373 SP8Q8IXZ3 490 aa20.95■□□□□ 0.94
SMPD3-211ENST00000568373 ROBO3Q96MS0 1386 aa20.95■□□□□ 0.94
SMPD3-211ENST00000568373 NAV1Q8NEY1 1877 aa20.95■□□□□ 0.94
SMPD3-211ENST00000568373 TSPY2A6NKD2 308 aa20.95■□□□□ 0.94
SMPD3-211ENST00000568373 WDHD1O75717 1129 aaPredicted RBP20.95■□□□□ 0.94
SMPD3-211ENST00000568373 MARCKSP29966 332 aaPredicted RBP20.95■□□□□ 0.94
SMPD3-211ENST00000568373 DNAJC25Q9H1X3 360 aa20.95■□□□□ 0.94
SMPD3-211ENST00000568373 C6orf229H3BNL8 230 aa20.94■□□□□ 0.94
SMPD3-211ENST00000568373 AP5Z1O43299 807 aa20.94■□□□□ 0.94
SMPD3-211ENST00000568373 PRPF3O43395 683 aaKnown RBP20.94■□□□□ 0.94
SMPD3-211ENST00000568373 ZNF165P49910 485 aa20.94■□□□□ 0.94
SMPD3-211ENST00000568373 AMOTL1Q8IY63 956 aa20.94■□□□□ 0.94
SMPD3-211ENST00000568373 EIF4ENIF1Q9NRA8 985 aaKnown RBP20.94■□□□□ 0.94
SMPD3-211ENST00000568373 ZKSCAN5Q9Y2L8 839 aa20.94■□□□□ 0.94
SMPD3-211ENST00000568373 PLEKHA8P1O95397 391 aa20.93■□□□□ 0.94
SMPD3-211ENST00000568373 PLCB2Q00722 1185 aa20.93■□□□□ 0.94
SMPD3-211ENST00000568373 STX1AQ16623 288 aa20.93■□□□□ 0.94
SMPD3-211ENST00000568373 SLC4A8Q2Y0W8 1093 aa20.93■□□□□ 0.94
SMPD3-211ENST00000568373 TBC1D22AQ8WUA7 517 aa20.93■□□□□ 0.94
SMPD3-211ENST00000568373 TGFBRAP1Q8WUH2 860 aa20.93■□□□□ 0.94
SMPD3-211ENST00000568373 EIF2AK3Q9NZJ5 1116 aaKnown RBP20.93■□□□□ 0.94
SMPD3-211ENST00000568373 ATP6V0A2Q9Y487 856 aa20.93■□□□□ 0.94
SMPD3-211ENST00000568373 PKN1Q16512 942 aa20.93■□□□□ 0.94
SMPD3-211ENST00000568373 MFSD14BQ5SR56 506 aa20.93■□□□□ 0.94
SMPD3-211ENST00000568373 TMTC3Q6ZXV5 915 aa20.93■□□□□ 0.94
SMPD3-211ENST00000568373 SDF4Q9BRK5 362 aa20.93■□□□□ 0.94
SMPD3-211ENST00000568373 GPR75-ASB3A0A0A6YYF3 556 aa20.92■□□□□ 0.94
SMPD3-211ENST00000568373 SRGNP10124 158 aa20.92■□□□□ 0.94
SMPD3-211ENST00000568373 PFKFB1P16118 471 aa20.92■□□□□ 0.94
SMPD3-211ENST00000568373 XBP1P17861 261 aa20.92■□□□□ 0.94
SMPD3-211ENST00000568373 BTDP43251 543 aa20.92■□□□□ 0.94
SMPD3-211ENST00000568373 FLAD1Q8NFF5 587 aa20.92■□□□□ 0.94
SMPD3-211ENST00000568373 CTCFLQ8NI51 663 aaPredicted RBP20.92■□□□□ 0.94
SMPD3-211ENST00000568373 CDK5RAP2Q96SN8 1893 aa20.92■□□□□ 0.94
SMPD3-211ENST00000568373 RILPL1Q5EBL4 403 aa20.92■□□□□ 0.94
SMPD3-211ENST00000568373 RCSD1Q6JBY9 416 aa20.92■□□□□ 0.94
SMPD3-211ENST00000568373 FAM205AQ6ZU69 1335 aa20.91■□□□□ 0.94
SMPD3-211ENST00000568373 ZNF202O95125 648 aa20.91■□□□□ 0.94
SMPD3-211ENST00000568373 TOB1P50616 345 aaPredicted RBP20.91■□□□□ 0.94
SMPD3-211ENST00000568373 TFAP4Q01664 338 aa20.91■□□□□ 0.94
SMPD3-211ENST00000568373 DYNLL2Q96FJ2 89 aa20.91■□□□□ 0.94
SMPD3-211ENST00000568373 FAM163AQ96GL9 167 aaPredicted RBP20.91■□□□□ 0.94
SMPD3-211ENST00000568373 V9GY48 417 aaPredicted RBP20.91■□□□□ 0.94
SMPD3-211ENST00000568373 NPR1P16066 1061 aa20.9■□□□□ 0.94
SMPD3-211ENST00000568373 EN1Q05925 392 aaPredicted RBP20.9■□□□□ 0.94
SMPD3-211ENST00000568373 NR5A1Q13285 461 aa20.9■□□□□ 0.94
SMPD3-211ENST00000568373 MAPKAPK5Q8IW41 473 aa20.9■□□□□ 0.94
SMPD3-211ENST00000568373 SLF2Q8IX21 1173 aa20.9■□□□□ 0.94
SMPD3-211ENST00000568373 SHISA4Q96DD7 197 aa20.9■□□□□ 0.94
SMPD3-211ENST00000568373 CNTNAP5Q8WYK1 1306 aa20.9■□□□□ 0.94
SMPD3-211ENST00000568373 PLCG2P16885 1265 aa20.9■□□□□ 0.94
SMPD3-211ENST00000568373 SHC4Q6S5L8 630 aa20.9■□□□□ 0.94
SMPD3-211ENST00000568373 DGKHQ86XP1 1220 aa20.9■□□□□ 0.94
SMPD3-211ENST00000568373 OXER1Q8TDS5 423 aa20.9■□□□□ 0.94
SMPD3-211ENST00000568373 MKNK2Q9HBH9 465 aa20.9■□□□□ 0.94
SMPD3-211ENST00000568373 ANO10Q9NW15 660 aa20.9■□□□□ 0.94
SMPD3-211ENST00000568373 VPS54Q9P1Q0 977 aa20.9■□□□□ 0.94
SMPD3-211ENST00000568373 FAM237AA0A1B0GTK4 181 aa20.89■□□□□ 0.93
SMPD3-211ENST00000568373 CUTAO60888 179 aa20.89■□□□□ 0.93
SMPD3-211ENST00000568373 C11orf57Q6ZUT1 292 aaPredicted RBP20.89■□□□□ 0.93
SMPD3-211ENST00000568373 DEFB132Q7Z7B7 95 aa20.89■□□□□ 0.93
SMPD3-211ENST00000568373 PHF20Q9BVI0 1012 aa20.89■□□□□ 0.93
SMPD3-211ENST00000568373 IL17RBQ9NRM6 502 aa20.89■□□□□ 0.93
SMPD3-211ENST00000568373 HPSEQ9Y251 543 aa20.89■□□□□ 0.93
SMPD3-211ENST00000568373 GAKO14976 1311 aa20.89■□□□□ 0.93
SMPD3-211ENST00000568373 DDX60LQ5H9U9 1706 aaKnown RBP20.89■□□□□ 0.93
SMPD3-211ENST00000568373 PLCD1P51178 756 aa20.89■□□□□ 0.93
SMPD3-211ENST00000568373 RESP18Q5W5W9 173 aa20.89■□□□□ 0.93
SMPD3-211ENST00000568373 TEX11Q8IYF3 940 aa20.89■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms