RNA–Protein interactions for RNA: ENST00000567549.2

LINC01238-205, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

BASIC

Gene LINC01238, Length 1,107 nt, Biotype antisense RNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-205ENST00000567549 CCAR1Q8IX12 1150 aaKnown RBP22.61■■□□□ 1.21
LINC01238-205ENST00000567549 MAGEB6Q8N7X4 407 aa22.61■■□□□ 1.21
LINC01238-205ENST00000567549 EHD4Q9H223 541 aa22.61■■□□□ 1.21
LINC01238-205ENST00000567549 FRMD4AQ9P2Q2 1039 aaPredicted RBP22.61■■□□□ 1.21
LINC01238-205ENST00000567549 TAOK2Q9UL54 1235 aa22.61■■□□□ 1.21
LINC01238-205ENST00000567549 GABRQQ9UN88 632 aa22.61■■□□□ 1.21
LINC01238-205ENST00000567549 EXOC6BQ9Y2D4 811 aa22.61■■□□□ 1.21
LINC01238-205ENST00000567549 MYO5AQ9Y4I1 1855 aaKnown RBP22.6■■□□□ 1.21
LINC01238-205ENST00000567549 SLURP2P0DP57 97 aa22.6■■□□□ 1.21
LINC01238-205ENST00000567549 ADGRA1Q86SQ6 560 aa22.6■■□□□ 1.21
LINC01238-205ENST00000567549 U2AF1L4Q8WU68 220 aaKnown RBP22.6■■□□□ 1.21
LINC01238-205ENST00000567549 DPF3Q92784 378 aa22.6■■□□□ 1.21
LINC01238-205ENST00000567549 TLR7Q9NYK1 1049 aaKnown RBP22.6■■□□□ 1.21
LINC01238-205ENST00000567549 SERPINB13Q9UIV8 391 aa22.6■■□□□ 1.21
LINC01238-205ENST00000567549 ZBTB21Q9ULJ3 1066 aa22.6■■□□□ 1.21
LINC01238-205ENST00000567549 NR2E3Q9Y5X4 410 aa22.6■■□□□ 1.21
LINC01238-205ENST00000567549 MKI67P46013 3256 aaKnown RBP22.6■■□□□ 1.21
LINC01238-205ENST00000567549 RAB11FIP3O75154 756 aa22.59■■□□□ 1.21
LINC01238-205ENST00000567549 INHAP05111 366 aa22.59■■□□□ 1.21
LINC01238-205ENST00000567549 IFIT2P09913 472 aaKnown RBP22.59■■□□□ 1.21
LINC01238-205ENST00000567549 USP14P54578 494 aa22.59■■□□□ 1.21
LINC01238-205ENST00000567549 RHPN1Q8TCX5 695 aa22.59■■□□□ 1.21
LINC01238-205ENST00000567549 PANK1Q8TE04 598 aa22.59■■□□□ 1.21
LINC01238-205ENST00000567549 CABP5Q9NP86 173 aa22.59■■□□□ 1.21
LINC01238-205ENST00000567549 MORF4L1Q9UBU8 362 aa22.59■■□□□ 1.21
LINC01238-205ENST00000567549 SAP30BPQ9UHR5 308 aaKnown RBP22.59■■□□□ 1.21
LINC01238-205ENST00000567549 SGPL1O95470 568 aa22.58■■□□□ 1.21
LINC01238-205ENST00000567549 PDE3AQ14432 1141 aa22.58■■□□□ 1.21
LINC01238-205ENST00000567549 USP17L2Q6R6M4 530 aa22.58■■□□□ 1.21
LINC01238-205ENST00000567549 TRMT44Q8IYL2 757 aaKnown RBP22.58■■□□□ 1.21
LINC01238-205ENST00000567549 PPIL4Q8WUA2 492 aaKnown RBP eCLIP22.58■■□□□ 1.21
LINC01238-205ENST00000567549 SOCS4Q8WXH5 440 aa22.58■■□□□ 1.21
LINC01238-205ENST00000567549 FEZ1Q99689 392 aa22.58■■□□□ 1.21
LINC01238-205ENST00000567549 CRNKL1Q9BZJ0 848 aaKnown RBP22.58■■□□□ 1.21
LINC01238-205ENST00000567549 SIPA1L1O43166 1804 aa22.58■■□□□ 1.21
LINC01238-205ENST00000567549 FARP2O94887 1054 aaPredicted RBP22.57■■□□□ 1.2
LINC01238-205ENST00000567549 TFRCP02786 760 aaKnown RBP22.57■■□□□ 1.2
LINC01238-205ENST00000567549 HMGCRP04035 888 aa22.57■■□□□ 1.2
LINC01238-205ENST00000567549 DYNLL1P63167 89 aaKnown RBP22.57■■□□□ 1.2
LINC01238-205ENST00000567549 MIGA1Q8NAN2 632 aa22.57■■□□□ 1.2
LINC01238-205ENST00000567549 GPRC5AQ8NFJ5 357 aa22.57■■□□□ 1.2
LINC01238-205ENST00000567549 SHISA4Q96DD7 197 aa22.57■■□□□ 1.2
LINC01238-205ENST00000567549 UNC93B1Q9H1C4 597 aa22.57■■□□□ 1.2
LINC01238-205ENST00000567549 GDF11O95390 407 aa22.56■■□□□ 1.2
LINC01238-205ENST00000567549 ELNP15502 786 aa22.56■■□□□ 1.2
LINC01238-205ENST00000567549 MAPK4P31152 587 aa22.56■■□□□ 1.2
LINC01238-205ENST00000567549 DNAJC18Q9H819 358 aa22.56■■□□□ 1.2
LINC01238-205ENST00000567549 CWC22Q9HCG8 908 aaKnown RBP22.56■■□□□ 1.2
LINC01238-205ENST00000567549 BRCA2P51587 3418 aa22.56■■□□□ 1.2
LINC01238-205ENST00000567549 MAGEB6P1A0A0J9YX57 407 aa22.55■■□□□ 1.2
LINC01238-205ENST00000567549 POLR3DP05423 398 aaPredicted RBP22.55■■□□□ 1.2
LINC01238-205ENST00000567549 HERVK_113P62684 666 aa22.55■■□□□ 1.2
LINC01238-205ENST00000567549 RRP1BQ14684 758 aaKnown RBP22.55■■□□□ 1.2
LINC01238-205ENST00000567549 TATDN1Q6P1N9 297 aa22.55■■□□□ 1.2
LINC01238-205ENST00000567549 DOCK3Q8IZD9 2030 aa22.54■■□□□ 1.2
LINC01238-205ENST00000567549 GLRX3O76003 335 aaKnown RBP22.54■■□□□ 1.2
LINC01238-205ENST00000567549 CCNA1P78396 465 aa22.54■■□□□ 1.2
LINC01238-205ENST00000567549 CERKLQ49MI3 558 aaPredicted RBP22.54■■□□□ 1.2
LINC01238-205ENST00000567549 SLC9C2Q5TAH2 1124 aa22.54■■□□□ 1.2
LINC01238-205ENST00000567549 AMOTL1Q8IY63 956 aa22.54■■□□□ 1.2
LINC01238-205ENST00000567549 ANKLE1Q8NAG6 615 aa22.54■■□□□ 1.2
LINC01238-205ENST00000567549 NUDT12Q9BQG2 462 aa22.54■■□□□ 1.2
LINC01238-205ENST00000567549 DDX24Q9GZR7 859 aaKnown RBP eCLIP22.54■■□□□ 1.2
LINC01238-205ENST00000567549 IL1RAPL2Q9NP60 686 aa22.54■■□□□ 1.2
LINC01238-205ENST00000567549 GH2P01242 217 aa22.53■■□□□ 1.2
LINC01238-205ENST00000567549 ABCB5Q2M3G0 1257 aa22.53■■□□□ 1.2
LINC01238-205ENST00000567549 DDRGK1Q96HY6 314 aa22.53■■□□□ 1.2
LINC01238-205ENST00000567549 DEFB118Q96PH6 123 aa22.53■■□□□ 1.2
LINC01238-205ENST00000567549 HMX1Q9NP08 348 aaPredicted RBP22.53■■□□□ 1.2
LINC01238-205ENST00000567549 PAK6Q9NQU5 681 aaPredicted RBP22.53■■□□□ 1.2
LINC01238-205ENST00000567549 USP17L15C9J2P7 530 aa22.52■■□□□ 1.2
LINC01238-205ENST00000567549 USP17L13C9JLJ4 530 aa22.52■■□□□ 1.2
LINC01238-205ENST00000567549 USP17L11C9JVI0 530 aa22.52■■□□□ 1.2
LINC01238-205ENST00000567549 USP17L18D6R9N7 530 aa22.52■■□□□ 1.2
LINC01238-205ENST00000567549 USP17L22D6RA61 530 aa22.52■■□□□ 1.2
LINC01238-205ENST00000567549 USP17L17D6RBQ6 530 aa22.52■■□□□ 1.2
LINC01238-205ENST00000567549 USP17L19D6RCP7 530 aa22.52■■□□□ 1.2
LINC01238-205ENST00000567549 USP17L20D6RJB6 530 aa22.52■■□□□ 1.2
LINC01238-205ENST00000567549 H0YGN5 161 aa22.52■■□□□ 1.2
LINC01238-205ENST00000567549 XRCC5P13010 732 aaKnown RBP22.52■■□□□ 1.2
LINC01238-205ENST00000567549 USP17L24Q0WX57 530 aa22.52■■□□□ 1.2
LINC01238-205ENST00000567549 C12orf42Q96LP6 360 aa22.52■■□□□ 1.2
LINC01238-205ENST00000567549 P2RX7Q99572 595 aaKnown RBP22.52■■□□□ 1.2
LINC01238-205ENST00000567549 XRN2Q9H0D6 950 aaKnown RBP eCLIP22.52■■□□□ 1.2
LINC01238-205ENST00000567549 ANTXR1Q9H6X2 564 aa22.52■■□□□ 1.2
LINC01238-205ENST00000567549 RPTORQ8N122 1335 aa22.52■■□□□ 1.2
LINC01238-205ENST00000567549 RAB3GAP1Q15042 981 aa22.51■■□□□ 1.19
LINC01238-205ENST00000567549 UBE2Q1Q7Z7E8 422 aa22.51■■□□□ 1.19
LINC01238-205ENST00000567549 DNAJC2Q99543 621 aaKnown RBP22.51■■□□□ 1.19
LINC01238-205ENST00000567549 KIAA1683Q9H0B3 1180 aa22.51■■□□□ 1.19
LINC01238-205ENST00000567549 ZBTB40Q9NUA8 1239 aa22.51■■□□□ 1.19
LINC01238-205ENST00000567549 EVI5O60447 810 aa22.5■■□□□ 1.19
LINC01238-205ENST00000567549 PDE6AP16499 860 aa22.5■■□□□ 1.19
LINC01238-205ENST00000567549 ERVK-9P63128 1117 aa22.5■■□□□ 1.19
LINC01238-205ENST00000567549 ERVK-24P63145 666 aa22.5■■□□□ 1.19
LINC01238-205ENST00000567549 NECAB2Q7Z6G3 386 aa22.5■■□□□ 1.19
LINC01238-205ENST00000567549 RIOK1Q9BRS2 568 aaKnown RBP22.5■■□□□ 1.19
LINC01238-205ENST00000567549 RCAN3Q9UKA8 241 aa22.5■■□□□ 1.19
LINC01238-205ENST00000567549 COG6Q9Y2V7 657 aa22.5■■□□□ 1.19
LINC01238-205ENST00000567549 RABGAP1Q9Y3P9 1069 aa22.5■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms