RNA–Protein interactions for RNA: ENST00000566560.5

KARS-207, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 1 (best)

Gene KARS, Length 1,231 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-207ENST00000566560 TTLL12Q14166 644 aaPredicted RBP13.67□□□□□ -0.22
KARS-207ENST00000566560 CTR9Q6PD62 1173 aa13.67□□□□□ -0.22
KARS-207ENST00000566560 EHD4Q9H223 541 aa13.67□□□□□ -0.22
KARS-207ENST00000566560 FAM196BA6NMK8 535 aa13.66□□□□□ -0.22
KARS-207ENST00000566560 MINDY4BA8MYZ0 360 aa13.66□□□□□ -0.22
KARS-207ENST00000566560 REC8O95072 547 aa13.66□□□□□ -0.22
KARS-207ENST00000566560 FGAP02671 866 aa13.66□□□□□ -0.22
KARS-207ENST00000566560 PLCD1P51178 756 aa13.66□□□□□ -0.22
KARS-207ENST00000566560 PTH1RQ03431 593 aa13.66□□□□□ -0.22
KARS-207ENST00000566560 PPARAQ07869 468 aa13.66□□□□□ -0.22
KARS-207ENST00000566560 PRKG1Q13976 671 aa13.66□□□□□ -0.22
KARS-207ENST00000566560 ALX1Q15699 326 aa13.66□□□□□ -0.22
KARS-207ENST00000566560 SBK1Q52WX2 424 aa13.66□□□□□ -0.22
KARS-207ENST00000566560 C12orf60Q5U649 245 aa13.66□□□□□ -0.22
KARS-207ENST00000566560 MIGA2Q7L4E1 593 aa13.66□□□□□ -0.22
KARS-207ENST00000566560 LSG1Q9H089 658 aaKnown RBP13.66□□□□□ -0.22
KARS-207ENST00000566560 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.66□□□□□ -0.22
KARS-207ENST00000566560 GBA2Q9HCG7 927 aaPredicted RBP13.66□□□□□ -0.22
KARS-207ENST00000566560 HERC5Q9UII4 1024 aaKnown RBP13.66□□□□□ -0.22
KARS-207ENST00000566560 SERPINB13Q9UIV8 391 aa13.66□□□□□ -0.22
KARS-207ENST00000566560 FZD1Q9UP38 647 aa13.66□□□□□ -0.22
KARS-207ENST00000566560 PPP1R12BO60237 982 aaPredicted RBP13.65□□□□□ -0.22
KARS-207ENST00000566560 SLURP2P0DP57 97 aa13.65□□□□□ -0.22
KARS-207ENST00000566560 ZNF341Q9BYN7 854 aa13.65□□□□□ -0.22
KARS-207ENST00000566560 DNAJC18Q9H819 358 aa13.65□□□□□ -0.22
KARS-207ENST00000566560 CTNNA3Q9UI47 895 aa13.65□□□□□ -0.22
KARS-207ENST00000566560 ANGEL1Q9UNK9 670 aaKnown RBP13.65□□□□□ -0.22
KARS-207ENST00000566560 BOLA1Q9Y3E2 137 aa13.65□□□□□ -0.22
KARS-207ENST00000566560 SMIM22K7EJ46 135 aa13.64□□□□□ -0.23
KARS-207ENST00000566560 SLC3A2P08195 630 aaKnown RBP13.64□□□□□ -0.23
KARS-207ENST00000566560 HAND2P61296 217 aa13.64□□□□□ -0.23
KARS-207ENST00000566560 FKBP1BP68106 108 aa13.64□□□□□ -0.23
KARS-207ENST00000566560 GABPAQ06546 454 aa13.64□□□□□ -0.23
KARS-207ENST00000566560 IMMTQ16891 758 aaKnown RBP13.64□□□□□ -0.23
KARS-207ENST00000566560 C8orf34Q49A92 452 aa13.64□□□□□ -0.23
KARS-207ENST00000566560 ARMC9Q7Z3E5 817 aa13.64□□□□□ -0.23
KARS-207ENST00000566560 STK11IPQ8N1F8 1099 aa13.64□□□□□ -0.23
KARS-207ENST00000566560 SLC44A5Q8NCS7 719 aa13.64□□□□□ -0.23
KARS-207ENST00000566560 DYNLL2Q96FJ2 89 aa13.64□□□□□ -0.23
KARS-207ENST00000566560 WRNIP1Q96S55 665 aa13.64□□□□□ -0.23
KARS-207ENST00000566560 SWAP70Q9UH65 585 aa13.64□□□□□ -0.23
KARS-207ENST00000566560 RBM8AQ9Y5S9 174 aaKnown RBP13.64□□□□□ -0.23
KARS-207ENST00000566560 TBC1D12O60347 775 aa13.63□□□□□ -0.23
KARS-207ENST00000566560 IREB2P48200 963 aaKnown RBP13.63□□□□□ -0.23
KARS-207ENST00000566560 CST9Q5W186 159 aa13.63□□□□□ -0.23
KARS-207ENST00000566560 C16orf86Q6ZW13 317 aa13.63□□□□□ -0.23
KARS-207ENST00000566560 MOB2Q70IA6 237 aa13.63□□□□□ -0.23
KARS-207ENST00000566560 METTL16Q86W50 562 aaKnown RBP13.63□□□□□ -0.23
KARS-207ENST00000566560 FOXP4Q8IVH2 680 aaPredicted RBP13.63□□□□□ -0.23
KARS-207ENST00000566560 C2orf69Q8N8R5 385 aa13.63□□□□□ -0.23
KARS-207ENST00000566560 MAP4K1Q92918 833 aa13.63□□□□□ -0.23
KARS-207ENST00000566560 TMEM121BQ9BXQ6 578 aaPredicted RBP13.63□□□□□ -0.23
KARS-207ENST00000566560 GREB1LQ9C091 1923 aaPredicted RBP13.62□□□□□ -0.23
KARS-207ENST00000566560 TMEM88BA6NKF7 163 aa13.62□□□□□ -0.23
KARS-207ENST00000566560 ZNF213O14771 459 aa13.62□□□□□ -0.23
KARS-207ENST00000566560 EIF5BO60841 1220 aaKnown RBP13.62□□□□□ -0.23
KARS-207ENST00000566560 SHMT1P34896 483 aa13.62□□□□□ -0.23
KARS-207ENST00000566560 MAP3K10Q02779 954 aa13.62□□□□□ -0.23
KARS-207ENST00000566560 CTDSPL2Q05D32 466 aa13.62□□□□□ -0.23
KARS-207ENST00000566560 MAP3K11Q16584 847 aa13.62□□□□□ -0.23
KARS-207ENST00000566560 TBC1D10CQ8IV04 446 aa13.62□□□□□ -0.23
KARS-207ENST00000566560 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.62□□□□□ -0.23
KARS-207ENST00000566560 KLRG1Q96E93 195 aa13.62□□□□□ -0.23
KARS-207ENST00000566560 ANAPC4Q9UJX5 808 aa13.62□□□□□ -0.23
KARS-207ENST00000566560 ABT1Q9ULW3 272 aaKnown RBP13.62□□□□□ -0.23
KARS-207ENST00000566560 USP2O75604 605 aaPredicted RBP13.61□□□□□ -0.23
KARS-207ENST00000566560 GDF11O95390 407 aa13.61□□□□□ -0.23
KARS-207ENST00000566560 INPP5BP32019 993 aa13.61□□□□□ -0.23
KARS-207ENST00000566560 CDK8P49336 464 aa13.61□□□□□ -0.23
KARS-207ENST00000566560 APLP1P51693 650 aa13.61□□□□□ -0.23
KARS-207ENST00000566560 PDE4BQ07343 736 aa13.61□□□□□ -0.23
KARS-207ENST00000566560 NBPF3Q9H094 633 aa13.61□□□□□ -0.23
KARS-207ENST00000566560 ZNF287Q9HBT7 754 aa13.61□□□□□ -0.23
KARS-207ENST00000566560 CSADQ9Y600 493 aa13.61□□□□□ -0.23
KARS-207ENST00000566560 PHF20L1A8MW92 1017 aa13.6□□□□□ -0.23
KARS-207ENST00000566560 UBE2Q2LH0YL09 131 aa13.6□□□□□ -0.23
KARS-207ENST00000566560 PRDM1O75626 825 aa13.6□□□□□ -0.23
KARS-207ENST00000566560 CYP21A2P08686 494 aa13.6□□□□□ -0.23
KARS-207ENST00000566560 HUNKP57058 714 aa13.6□□□□□ -0.23
KARS-207ENST00000566560 MAP3K9P80192 1104 aa13.6□□□□□ -0.23
KARS-207ENST00000566560 VGLL4Q14135 290 aa13.6□□□□□ -0.23
KARS-207ENST00000566560 RNF20Q5VTR2 975 aa13.6□□□□□ -0.23
KARS-207ENST00000566560 TATDN1Q6P1N9 297 aa13.6□□□□□ -0.23
KARS-207ENST00000566560 ANKRD13AQ8IZ07 590 aa13.6□□□□□ -0.23
KARS-207ENST00000566560 STAG1Q8WVM7 1258 aa13.6□□□□□ -0.23
KARS-207ENST00000566560 RNF41Q9H4P4 317 aaPredicted RBP13.6□□□□□ -0.23
KARS-207ENST00000566560 MKNK2Q9HBH9 465 aa13.6□□□□□ -0.23
KARS-207ENST00000566560 TOMM22Q9NS69 142 aa13.6□□□□□ -0.23
KARS-207ENST00000566560 ZNF112Q9UJU3 913 aa13.6□□□□□ -0.23
KARS-207ENST00000566560 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.6□□□□□ -0.23
KARS-207ENST00000566560 TLL2Q9Y6L7 1015 aa13.6□□□□□ -0.23
KARS-207ENST00000566560 NEDD4P46934 1319 aa13.6□□□□□ -0.23
KARS-207ENST00000566560 PHIPQ8WWQ0 1821 aa13.6□□□□□ -0.23
KARS-207ENST00000566560 MPHOSPH10O00566 681 aaKnown RBP13.59□□□□□ -0.23
KARS-207ENST00000566560 SLC27A2O14975 620 aa13.59□□□□□ -0.23
KARS-207ENST00000566560 EPB41L2O43491 1005 aaKnown RBP13.59□□□□□ -0.23
KARS-207ENST00000566560 CTNND1O60716 968 aaKnown RBP13.59□□□□□ -0.23
KARS-207ENST00000566560 PCP11498 1178 aaKnown RBP13.59□□□□□ -0.23
KARS-207ENST00000566560 MCCP23508 829 aa13.59□□□□□ -0.23
KARS-207ENST00000566560 CAP2P40123 477 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms