RNA–Protein interactions for RNA: ENST00000564540.5

UBR1-205, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-205ENST00000564540 XAGE3Q8WTP9 111 aa8.42□□□□□ -1.06
UBR1-205ENST00000564540 GATAD2BQ8WXI9 593 aa8.42□□□□□ -1.06
UBR1-205ENST00000564540 MIPEPQ99797 713 aa8.42□□□□□ -1.06
UBR1-205ENST00000564540 TJP2Q9UDY2 1190 aa8.42□□□□□ -1.06
UBR1-205ENST00000564540 TACC3Q9Y6A5 838 aa8.42□□□□□ -1.06
UBR1-205ENST00000564540 CNTNAP4Q9C0A0 1308 aa8.41□□□□□ -1.06
UBR1-205ENST00000564540 BPNT1O95861 308 aa8.41□□□□□ -1.06
UBR1-205ENST00000564540 GARTP22102 1010 aa8.41□□□□□ -1.06
UBR1-205ENST00000564540 CAP2P40123 477 aa8.41□□□□□ -1.06
UBR1-205ENST00000564540 SNAP47Q5SQN1 464 aa8.41□□□□□ -1.06
UBR1-205ENST00000564540 FBXO27Q8NI29 283 aa8.41□□□□□ -1.06
UBR1-205ENST00000564540 RIN3Q8TB24 985 aa8.41□□□□□ -1.06
UBR1-205ENST00000564540 BCL11AQ9H165 835 aa8.41□□□□□ -1.06
UBR1-205ENST00000564540 GGT7Q9UJ14 662 aa8.41□□□□□ -1.06
UBR1-205ENST00000564540 PLAGL2Q9UPG8 496 aa8.41□□□□□ -1.06
UBR1-205ENST00000564540 RBM47A0AV96 593 aaKnown RBP8.4□□□□□ -1.06
UBR1-205ENST00000564540 CEACAM5P06731 702 aa8.4□□□□□ -1.06
UBR1-205ENST00000564540 BNIP3Q12983 259 aa8.4□□□□□ -1.06
UBR1-205ENST00000564540 ZNF574Q6ZN55 896 aaPredicted RBP8.4□□□□□ -1.06
UBR1-205ENST00000564540 TMEM87AQ8NBN3 555 aa8.4□□□□□ -1.06
UBR1-205ENST00000564540 FLCNQ8NFG4 579 aa8.4□□□□□ -1.06
UBR1-205ENST00000564540 BCL7CQ8WUZ0 217 aaPredicted RBP8.4□□□□□ -1.06
UBR1-205ENST00000564540 TMEM87BQ96K49 555 aa8.4□□□□□ -1.06
UBR1-205ENST00000564540 BACH2Q9BYV9 841 aa8.4□□□□□ -1.06
UBR1-205ENST00000564540 GTF2IRD1Q9UHL9 959 aa8.4□□□□□ -1.06
UBR1-205ENST00000564540 CST3P01034 146 aaPredicted RBP8.39□□□□□ -1.07
UBR1-205ENST00000564540 JAG1P78504 1218 aa8.39□□□□□ -1.07
UBR1-205ENST00000564540 PDE4BQ07343 736 aa8.39□□□□□ -1.07
UBR1-205ENST00000564540 FBXL19Q6PCT2 694 aa8.39□□□□□ -1.07
UBR1-205ENST00000564540 HS2ST1Q7LGA3 356 aa8.39□□□□□ -1.07
UBR1-205ENST00000564540 SPRED2Q7Z698 418 aa8.39□□□□□ -1.07
UBR1-205ENST00000564540 WFDC3Q8IUB2 231 aa8.39□□□□□ -1.07
UBR1-205ENST00000564540 TP53INP2Q8IXH6 220 aa8.39□□□□□ -1.07
UBR1-205ENST00000564540 MRPL41Q8IXM3 137 aaKnown RBP8.39□□□□□ -1.07
UBR1-205ENST00000564540 ABI1Q8IZP0 508 aa8.39□□□□□ -1.07
UBR1-205ENST00000564540 MFSD2AQ8NA29 543 aa8.39□□□□□ -1.07
UBR1-205ENST00000564540 ACSF2Q96CM8 615 aaPredicted RBP8.39□□□□□ -1.07
UBR1-205ENST00000564540 MKNK2Q9HBH9 465 aa8.39□□□□□ -1.07
UBR1-205ENST00000564540 PAK6Q9NQU5 681 aaPredicted RBP8.39□□□□□ -1.07
UBR1-205ENST00000564540 PRDM5Q9NQX1 630 aaPredicted RBP8.39□□□□□ -1.07
UBR1-205ENST00000564540 IGF2BP3O00425 579 aaKnown RBP eCLIP8.38□□□□□ -1.07
UBR1-205ENST00000564540 TLR3O15455 904 aaKnown RBP8.38□□□□□ -1.07
UBR1-205ENST00000564540 GRIN3BO60391 1043 aa8.38□□□□□ -1.07
UBR1-205ENST00000564540 CD96P40200 585 aa8.38□□□□□ -1.07
UBR1-205ENST00000564540 IFI16Q16666 785 aaKnown RBP8.38□□□□□ -1.07
UBR1-205ENST00000564540 DIEXFQ68CQ4 756 aaKnown RBP8.38□□□□□ -1.07
UBR1-205ENST00000564540 LETMD1Q6P1Q0 360 aa8.38□□□□□ -1.07
UBR1-205ENST00000564540 TPX2Q9ULW0 747 aaKnown RBP8.38□□□□□ -1.07
UBR1-205ENST00000564540 SLC5A6Q9Y289 635 aa8.38□□□□□ -1.07
UBR1-205ENST00000564540 POLR3KQ9Y2Y1 108 aaPredicted RBP8.38□□□□□ -1.07
UBR1-205ENST00000564540 PRR33A8MZF0 331 aa8.37□□□□□ -1.07
UBR1-205ENST00000564540 PLCG1P19174 1290 aa8.37□□□□□ -1.07
UBR1-205ENST00000564540 EIF4A3P38919 411 aaKnown RBP8.37□□□□□ -1.07
UBR1-205ENST00000564540 FAM196AQ6ZSG2 479 aa8.37□□□□□ -1.07
UBR1-205ENST00000564540 MCATQ8IVS2 390 aaKnown RBP8.37□□□□□ -1.07
UBR1-205ENST00000564540 FBXL18Q96ME1 805 aa8.37□□□□□ -1.07
UBR1-205ENST00000564540 ADAM30Q9UKF2 790 aa8.37□□□□□ -1.07
UBR1-205ENST00000564540 UPK3BL1B0FP48 263 aa8.36□□□□□ -1.07
UBR1-205ENST00000564540 UPK3BL2E5RIL1 263 aa8.36□□□□□ -1.07
UBR1-205ENST00000564540 NKPD1Q17RQ9 610 aa8.36□□□□□ -1.07
UBR1-205ENST00000564540 SLC6A19Q695T7 634 aa8.36□□□□□ -1.07
UBR1-205ENST00000564540 REC114Q7Z4M0 266 aa8.36□□□□□ -1.07
UBR1-205ENST00000564540 SPACA3Q8IXA5 215 aa8.36□□□□□ -1.07
UBR1-205ENST00000564540 KCNQ5Q9NR82 932 aa8.36□□□□□ -1.07
UBR1-205ENST00000564540 ADAMTS1Q9UHI8 967 aa8.36□□□□□ -1.07
UBR1-205ENST00000564540 MAPK8IP1Q9UQF2 711 aa8.36□□□□□ -1.07
UBR1-205ENST00000564540 GNAT3A8MTJ3 354 aa8.35□□□□□ -1.07
UBR1-205ENST00000564540 CRKP46108 304 aa8.35□□□□□ -1.07
UBR1-205ENST00000564540 MPP2Q14168 576 aa8.35□□□□□ -1.07
UBR1-205ENST00000564540 AOC3Q16853 763 aa8.35□□□□□ -1.07
UBR1-205ENST00000564540 CDH24Q86UP0 819 aa8.35□□□□□ -1.07
UBR1-205ENST00000564540 STK11IPQ8N1F8 1099 aa8.35□□□□□ -1.07
UBR1-205ENST00000564540 ZNF296Q8WUU4 475 aaPredicted RBP8.35□□□□□ -1.07
UBR1-205ENST00000564540 MISP3Q96FF7 219 aa8.35□□□□□ -1.07
UBR1-205ENST00000564540 HRASLS5Q96KN8 279 aa8.35□□□□□ -1.07
UBR1-205ENST00000564540 TNKS2Q9H2K2 1166 aa8.35□□□□□ -1.07
UBR1-205ENST00000564540 REV1Q9UBZ9 1251 aa8.35□□□□□ -1.07
UBR1-205ENST00000564540 TMEM265A0A087WTH1 108 aa8.34□□□□□ -1.07
UBR1-205ENST00000564540 GREM1O60565 184 aa8.34□□□□□ -1.07
UBR1-205ENST00000564540 HTR3BO95264 441 aa8.34□□□□□ -1.07
UBR1-205ENST00000564540 CD8BP10966 210 aa8.34□□□□□ -1.07
UBR1-205ENST00000564540 ZNF76P36508 570 aa8.34□□□□□ -1.07
UBR1-205ENST00000564540 PRKCQQ04759 706 aa8.34□□□□□ -1.07
UBR1-205ENST00000564540 SFRP5Q5T4F7 317 aa8.34□□□□□ -1.07
UBR1-205ENST00000564540 FAM13CQ8NE31 585 aa8.34□□□□□ -1.07
UBR1-205ENST00000564540 ADGRE2Q9UHX3 823 aa8.34□□□□□ -1.07
UBR1-205ENST00000564540 VAV3Q9UKW4 847 aa8.34□□□□□ -1.07
UBR1-205ENST00000564540 SUPT16HQ9Y5B9 1047 aaKnown RBP8.34□□□□□ -1.07
UBR1-205ENST00000564540 PRR36Q9H6K5 1346 aa8.33□□□□□ -1.08
UBR1-205ENST00000564540 DNAJA2O60884 412 aa8.33□□□□□ -1.08
UBR1-205ENST00000564540 CBX7O95931 251 aa8.33□□□□□ -1.08
UBR1-205ENST00000564540 FANCCQ00597 558 aa8.33□□□□□ -1.08
UBR1-205ENST00000564540 TMEM201Q5SNT2 666 aa8.33□□□□□ -1.08
UBR1-205ENST00000564540 UBP1Q9NZI7 540 aa8.33□□□□□ -1.08
UBR1-205ENST00000564540 KLHL3Q9UH77 587 aa8.33□□□□□ -1.08
UBR1-205ENST00000564540 RECKO95980 971 aa8.32□□□□□ -1.08
UBR1-205ENST00000564540 PLCL1Q15111 1095 aa8.32□□□□□ -1.08
UBR1-205ENST00000564540 CWF19L2Q2TBE0 894 aaKnown RBP8.32□□□□□ -1.08
UBR1-205ENST00000564540 RGS22Q8NE09 1264 aa8.32□□□□□ -1.08
UBR1-205ENST00000564540 DNAJB8Q8NHS0 232 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms