RNA–Protein interactions for RNA: ENST00000563425.2

CDH5-204, Transcript of cadherin 5, humanhuman

TSL 5 BASIC

Gene CDH5, Length 1,932 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH5-204ENST00000563425 TIGD1Q96MW7 591 aa22.52■■□□□ 1.2
CDH5-204ENST00000563425 RBM28Q9NW13 759 aaKnown RBP22.52■■□□□ 1.2
CDH5-204ENST00000563425 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP22.51■■□□□ 1.19
CDH5-204ENST00000563425 GOLGA6L19H0YKK7 550 aa22.51■■□□□ 1.19
CDH5-204ENST00000563425 DDAH1O94760 285 aa22.51■■□□□ 1.19
CDH5-204ENST00000563425 CYP2D6P10635 497 aa22.51■■□□□ 1.19
CDH5-204ENST00000563425 SHC4Q6S5L8 630 aa22.51■■□□□ 1.19
CDH5-204ENST00000563425 SPC24Q8NBT2 197 aa22.51■■□□□ 1.19
CDH5-204ENST00000563425 ERCC4Q92889 916 aaPredicted RBP22.51■■□□□ 1.19
CDH5-204ENST00000563425 CUTAO60888 179 aa22.51■■□□□ 1.19
CDH5-204ENST00000563425 TOB1P50616 345 aaPredicted RBP22.51■■□□□ 1.19
CDH5-204ENST00000563425 GPSM2P81274 684 aa22.51■■□□□ 1.19
CDH5-204ENST00000563425 RESP18Q5W5W9 173 aa22.51■■□□□ 1.19
CDH5-204ENST00000563425 ARHGAP30Q7Z6I6 1101 aaPredicted RBP22.51■■□□□ 1.19
CDH5-204ENST00000563425 CEP57L1Q8IYX8 460 aa22.51■■□□□ 1.19
CDH5-204ENST00000563425 TRIM5Q9C035 493 aa22.51■■□□□ 1.19
CDH5-204ENST00000563425 LRRC37AA6NMS7 1700 aa22.5■■□□□ 1.19
CDH5-204ENST00000563425 PRPF3O43395 683 aaKnown RBP22.5■■□□□ 1.19
CDH5-204ENST00000563425 GSTO1P78417 241 aa22.5■■□□□ 1.19
CDH5-204ENST00000563425 AKAP17AQ02040 695 aaKnown RBP22.5■■□□□ 1.19
CDH5-204ENST00000563425 PDE4BQ07343 736 aa22.5■■□□□ 1.19
CDH5-204ENST00000563425 SARM1Q6SZW1 724 aa22.5■■□□□ 1.19
CDH5-204ENST00000563425 DHX40Q8IX18 779 aaKnown RBP22.5■■□□□ 1.19
CDH5-204ENST00000563425 MKRN1Q9UHC7 482 aaKnown RBP22.5■■□□□ 1.19
CDH5-204ENST00000563425 A0A087WWV3 80 aa22.49■■□□□ 1.19
CDH5-204ENST00000563425 SYKP43405 635 aa22.49■■□□□ 1.19
CDH5-204ENST00000563425 PKN1Q16512 942 aa22.49■■□□□ 1.19
CDH5-204ENST00000563425 RILPL1Q5EBL4 403 aa22.49■■□□□ 1.19
CDH5-204ENST00000563425 PIBF1Q8WXW3 757 aa22.49■■□□□ 1.19
CDH5-204ENST00000563425 RBM17Q96I25 401 aaKnown RBP22.49■■□□□ 1.19
CDH5-204ENST00000563425 NAT10Q9H0A0 1025 aaKnown RBP22.49■■□□□ 1.19
CDH5-204ENST00000563425 LTBP1Q14766 1721 aa22.49■■□□□ 1.19
CDH5-204ENST00000563425 PLEKHA8P1O95397 391 aa22.48■■□□□ 1.19
CDH5-204ENST00000563425 ATP2B4P23634 1241 aa22.48■■□□□ 1.19
CDH5-204ENST00000563425 SHISA4Q96DD7 197 aa22.48■■□□□ 1.19
CDH5-204ENST00000563425 GPR101Q96P66 508 aaPredicted RBP22.48■■□□□ 1.19
CDH5-204ENST00000563425 KCNF1Q9H3M0 494 aa22.48■■□□□ 1.19
CDH5-204ENST00000563425 MCM9Q9NXL9 1143 aa22.48■■□□□ 1.19
CDH5-204ENST00000563425 USP17L8P0C7I0 530 aa22.47■■□□□ 1.19
CDH5-204ENST00000563425 XBP1P17861 261 aa22.47■■□□□ 1.19
CDH5-204ENST00000563425 NT5C2P49902 561 aa22.47■■□□□ 1.19
CDH5-204ENST00000563425 PPP4CP60510 307 aa22.47■■□□□ 1.19
CDH5-204ENST00000563425 RBM6P78332 1123 aaKnown RBP22.47■■□□□ 1.19
CDH5-204ENST00000563425 NR5A1Q13285 461 aa22.47■■□□□ 1.19
CDH5-204ENST00000563425 FAM47AQ5JRC9 791 aa22.47■■□□□ 1.19
CDH5-204ENST00000563425 C12orf60Q5U649 245 aa22.47■■□□□ 1.19
CDH5-204ENST00000563425 TMTC3Q6ZXV5 915 aa22.47■■□□□ 1.19
CDH5-204ENST00000563425 KRI1Q8N9T8 703 aaKnown RBP22.47■■□□□ 1.19
CDH5-204ENST00000563425 CLIC6Q96NY7 704 aa22.47■■□□□ 1.19
CDH5-204ENST00000563425 ANKRD31Q8N7Z5 1873 aa22.47■■□□□ 1.19
CDH5-204ENST00000563425 BECN2A8MW95 431 aa22.47■■□□□ 1.19
CDH5-204ENST00000563425 NMT2O60551 498 aa22.47■■□□□ 1.19
CDH5-204ENST00000563425 UFL1O94874 794 aa22.47■■□□□ 1.19
CDH5-204ENST00000563425 CDC25BP30305 580 aa22.47■■□□□ 1.19
CDH5-204ENST00000563425 HOXA10P31260 410 aaPredicted RBP22.47■■□□□ 1.19
CDH5-204ENST00000563425 GRIK5Q16478 980 aa22.47■■□□□ 1.19
CDH5-204ENST00000563425 OXER1Q8TDS5 423 aa22.47■■□□□ 1.19
CDH5-204ENST00000563425 SH3RF3Q8TEJ3 882 aaPredicted RBP22.47■■□□□ 1.19
CDH5-204ENST00000563425 BAZ2BQ9UIF8 2168 aaKnown RBP22.47■■□□□ 1.19
CDH5-204ENST00000563425 ROBO3Q96MS0 1386 aa22.46■■□□□ 1.19
CDH5-204ENST00000563425 BBOX1O75936 387 aa22.46■■□□□ 1.19
CDH5-204ENST00000563425 BAG3O95817 575 aa22.46■■□□□ 1.19
CDH5-204ENST00000563425 LDHCP07864 332 aa22.46■■□□□ 1.19
CDH5-204ENST00000563425 USP5P45974 858 aa22.46■■□□□ 1.19
CDH5-204ENST00000563425 DDR1Q08345 913 aa22.46■■□□□ 1.19
CDH5-204ENST00000563425 ZRSR1Q15695 479 aaKnown RBP22.46■■□□□ 1.19
CDH5-204ENST00000563425 KRT27Q7Z3Y8 459 aa22.46■■□□□ 1.19
CDH5-204ENST00000563425 BPIFA3Q9BQP9 254 aa22.46■■□□□ 1.19
CDH5-204ENST00000563425 PHF20Q9BVI0 1012 aa22.46■■□□□ 1.19
CDH5-204ENST00000563425 CD209Q9NNX6 404 aa22.46■■□□□ 1.19
CDH5-204ENST00000563425 GGA1Q9UJY5 639 aa22.46■■□□□ 1.19
CDH5-204ENST00000563425 V9GY48 417 aaPredicted RBP22.46■■□□□ 1.19
CDH5-204ENST00000563425 TRIM37O94972 964 aa22.45■■□□□ 1.18
CDH5-204ENST00000563425 IL1R1P14778 569 aa22.45■■□□□ 1.18
CDH5-204ENST00000563425 NLRP12P59046 1061 aa22.45■■□□□ 1.18
CDH5-204ENST00000563425 DIXDC1Q155Q3 683 aa22.45■■□□□ 1.18
CDH5-204ENST00000563425 VPS54Q9P1Q0 977 aa22.45■■□□□ 1.18
CDH5-204ENST00000563425 DDX60LQ5H9U9 1706 aaKnown RBP22.45■■□□□ 1.18
CDH5-204ENST00000563425 CNTNAP5Q8WYK1 1306 aa22.45■■□□□ 1.18
CDH5-204ENST00000563425 TSPY2A6NKD2 308 aa22.45■■□□□ 1.18
CDH5-204ENST00000563425 DPCR1Q3MIW9 517 aa22.45■■□□□ 1.18
CDH5-204ENST00000563425 RCSD1Q6JBY9 416 aa22.45■■□□□ 1.18
CDH5-204ENST00000563425 AOPEPQ8N6M6 819 aa22.45■■□□□ 1.18
CDH5-204ENST00000563425 PODXL2Q9NZ53 605 aa22.45■■□□□ 1.18
CDH5-204ENST00000563425 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.45■■□□□ 1.18
CDH5-204ENST00000563425 EP400Q96L91 3159 aa22.45■■□□□ 1.18
CDH5-204ENST00000563425 MYH1P12882 1939 aa22.44■■□□□ 1.18
CDH5-204ENST00000563425 FOCADQ5VW36 1801 aa22.44■■□□□ 1.18
CDH5-204ENST00000563425 KLRG2A4D1S0 409 aaPredicted RBP22.44■■□□□ 1.18
CDH5-204ENST00000563425 POLRMTO00411 1230 aaKnown RBP22.44■■□□□ 1.18
CDH5-204ENST00000563425 PTPREP23469 700 aa22.44■■□□□ 1.18
CDH5-204ENST00000563425 DRC7Q8IY82 874 aa22.44■■□□□ 1.18
CDH5-204ENST00000563425 CTCFLQ8NI51 663 aaPredicted RBP22.44■■□□□ 1.18
CDH5-204ENST00000563425 MRFAP1L1Q96HT8 127 aa22.44■■□□□ 1.18
CDH5-204ENST00000563425 CRAMP1Q96RY5 1269 aa22.44■■□□□ 1.18
CDH5-204ENST00000563425 NOL10Q9BSC4 688 aaKnown RBP22.44■■□□□ 1.18
CDH5-204ENST00000563425 FBXO2Q9UK22 296 aaPredicted RBP22.44■■□□□ 1.18
CDH5-204ENST00000563425 PTGS1P23219 599 aa22.43■■□□□ 1.18
CDH5-204ENST00000563425 TUBE1Q9UJT0 475 aa22.43■■□□□ 1.18
CDH5-204ENST00000563425 KCNH3Q9ULD8 1083 aa22.43■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms