RNA–Protein interactions for RNA: ENST00000560861.1

SNX1-212, Transcript of sorting nexin 1, humanhuman

TSL 3

Gene SNX1, Length 850 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-212ENST00000560861 STK3Q13188 491 aa13.26□□□□□ -0.29
SNX1-212ENST00000560861 NSUN7Q8NE18 718 aaKnown RBP13.26□□□□□ -0.29
SNX1-212ENST00000560861 NEDD1Q8NHV4 660 aa13.26□□□□□ -0.29
SNX1-212ENST00000560861 ZKSCAN3Q9BRR0 538 aa13.26□□□□□ -0.29
SNX1-212ENST00000560861 DHX36Q9H2U1 1008 aaKnown RBP13.26□□□□□ -0.29
SNX1-212ENST00000560861 MYOZ2Q9NPC6 264 aa13.26□□□□□ -0.29
SNX1-212ENST00000560861 IL17RBQ9NRM6 502 aa13.26□□□□□ -0.29
SNX1-212ENST00000560861 FAM217BQ9NTX9 383 aaPredicted RBP13.26□□□□□ -0.29
SNX1-212ENST00000560861 IGKV6D-41A0A0C4DH26 115 aa13.25□□□□□ -0.29
SNX1-212ENST00000560861 GOLGA8BA8MQT2 603 aa13.25□□□□□ -0.29
SNX1-212ENST00000560861 WNT10BO00744 389 aa13.25□□□□□ -0.29
SNX1-212ENST00000560861 NMT2O60551 498 aa13.25□□□□□ -0.29
SNX1-212ENST00000560861 JAK2O60674 1132 aa13.25□□□□□ -0.29
SNX1-212ENST00000560861 EGFRP00533 1210 aa13.25□□□□□ -0.29
SNX1-212ENST00000560861 SHMT1P34896 483 aa13.25□□□□□ -0.29
SNX1-212ENST00000560861 TFAP4Q01664 338 aa13.25□□□□□ -0.29
SNX1-212ENST00000560861 PKP1Q13835 747 aa13.25□□□□□ -0.29
SNX1-212ENST00000560861 WTAPQ15007 396 aa13.25□□□□□ -0.29
SNX1-212ENST00000560861 SART3Q15020 963 aaKnown RBP13.25□□□□□ -0.29
SNX1-212ENST00000560861 GPR162Q16538 588 aa13.25□□□□□ -0.29
SNX1-212ENST00000560861 FAM47AQ5JRC9 791 aa13.25□□□□□ -0.29
SNX1-212ENST00000560861 TMTC2Q8N394 836 aa13.25□□□□□ -0.29
SNX1-212ENST00000560861 UBAC1Q9BSL1 405 aa13.25□□□□□ -0.29
SNX1-212ENST00000560861 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.25□□□□□ -0.29
SNX1-212ENST00000560861 NCOA5Q9HCD5 579 aaKnown RBP13.25□□□□□ -0.29
SNX1-212ENST00000560861 SWAP70Q9UH65 585 aa13.25□□□□□ -0.29
SNX1-212ENST00000560861 SERPINB13Q9UIV8 391 aa13.25□□□□□ -0.29
SNX1-212ENST00000560861 DTNBO60941 627 aa13.24□□□□□ -0.29
SNX1-212ENST00000560861 BRD1O95696 1058 aa13.24□□□□□ -0.29
SNX1-212ENST00000560861 GJB2P29033 226 aa13.24□□□□□ -0.29
SNX1-212ENST00000560861 CCT2P78371 535 aaKnown RBP13.24□□□□□ -0.29
SNX1-212ENST00000560861 NUCB2P80303 420 aa13.24□□□□□ -0.29
SNX1-212ENST00000560861 NBPF9Q3BBW0 867 aa13.24□□□□□ -0.29
SNX1-212ENST00000560861 FAM83AQ86UY5 434 aa13.24□□□□□ -0.29
SNX1-212ENST00000560861 IQCA1Q86XH1 822 aa13.24□□□□□ -0.29
SNX1-212ENST00000560861 MICALL2Q8IY33 904 aa13.24□□□□□ -0.29
SNX1-212ENST00000560861 GPC2Q8N158 579 aa13.24□□□□□ -0.29
SNX1-212ENST00000560861 FAM151AQ8WW52 585 aa13.24□□□□□ -0.29
SNX1-212ENST00000560861 ZNF287Q9HBT7 754 aa13.24□□□□□ -0.29
SNX1-212ENST00000560861 CNOT7Q9UIV1 285 aaKnown RBP13.24□□□□□ -0.29
SNX1-212ENST00000560861 SMC3Q9UQE7 1217 aa13.24□□□□□ -0.29
SNX1-212ENST00000560861 CLRN2A0PK11 232 aa13.23□□□□□ -0.29
SNX1-212ENST00000560861 TSPY2A6NKD2 308 aa13.23□□□□□ -0.29
SNX1-212ENST00000560861 ZBTB43O43298 467 aa13.23□□□□□ -0.29
SNX1-212ENST00000560861 HLA-DOAP06340 250 aa13.23□□□□□ -0.29
SNX1-212ENST00000560861 SLURP2P0DP57 97 aa13.23□□□□□ -0.29
SNX1-212ENST00000560861 CDC27P30260 824 aa13.23□□□□□ -0.29
SNX1-212ENST00000560861 TCP10Q12799 353 aa13.23□□□□□ -0.29
SNX1-212ENST00000560861 TROAPQ12815 778 aa13.23□□□□□ -0.29
SNX1-212ENST00000560861 NTRK3Q16288 839 aa13.23□□□□□ -0.29
SNX1-212ENST00000560861 CCDC178Q5BJE1 867 aa13.23□□□□□ -0.29
SNX1-212ENST00000560861 TATDN1Q6P1N9 297 aa13.23□□□□□ -0.29
SNX1-212ENST00000560861 DGKHQ86XP1 1220 aa13.23□□□□□ -0.29
SNX1-212ENST00000560861 RAB11FIP4Q86YS3 637 aa13.23□□□□□ -0.29
SNX1-212ENST00000560861 FOXP4Q8IVH2 680 aaPredicted RBP13.23□□□□□ -0.29
SNX1-212ENST00000560861 ZNF654Q8IZM8 581 aa13.23□□□□□ -0.29
SNX1-212ENST00000560861 MKNK2Q9HBH9 465 aa13.23□□□□□ -0.29
SNX1-212ENST00000560861 GPRC5DQ9NZD1 345 aa13.23□□□□□ -0.29
SNX1-212ENST00000560861 PI4KBQ9UBF8 816 aa13.23□□□□□ -0.29
SNX1-212ENST00000560861 GJA3Q9Y6H8 435 aa13.23□□□□□ -0.29
SNX1-212ENST00000560861 MYH6P13533 1939 aa13.22□□□□□ -0.29
SNX1-212ENST00000560861 ERICH2A1L162 156 aa13.22□□□□□ -0.29
SNX1-212ENST00000560861 PTPDC1A2A3K4 754 aa13.22□□□□□ -0.29
SNX1-212ENST00000560861 CCDC69A6NI79 296 aa13.22□□□□□ -0.29
SNX1-212ENST00000560861 DDAH1O94760 285 aa13.22□□□□□ -0.29
SNX1-212ENST00000560861 FDPSP14324 419 aaKnown RBP13.22□□□□□ -0.29
SNX1-212ENST00000560861 AKR1B1P15121 316 aa13.22□□□□□ -0.29
SNX1-212ENST00000560861 SYT1P21579 422 aa13.22□□□□□ -0.29
SNX1-212ENST00000560861 CLEC17AQ6ZS10 378 aa13.22□□□□□ -0.29
SNX1-212ENST00000560861 ZNF444Q8N0Y2 327 aaPredicted RBP13.22□□□□□ -0.29
SNX1-212ENST00000560861 CHMP4CQ96CF2 233 aa13.22□□□□□ -0.29
SNX1-212ENST00000560861 MYL10Q9BUA6 226 aa13.22□□□□□ -0.29
SNX1-212ENST00000560861 TMOD2Q9NZR1 351 aa13.22□□□□□ -0.29
SNX1-212ENST00000560861 RNF181Q9P0P0 153 aa13.22□□□□□ -0.29
SNX1-212ENST00000560861 SLC12A7Q9Y666 1083 aa13.22□□□□□ -0.29
SNX1-212ENST00000560861 MYH4Q9Y623 1939 aa13.21□□□□□ -0.29
SNX1-212ENST00000560861 GOLGA8AA7E2F4 631 aa13.21□□□□□ -0.29
SNX1-212ENST00000560861 TCP10L2B9ZVM9 353 aa13.21□□□□□ -0.29
SNX1-212ENST00000560861 TSPY3P0CV98 308 aa13.21□□□□□ -0.29
SNX1-212ENST00000560861 TSPY8P0CW00 308 aa13.21□□□□□ -0.29
SNX1-212ENST00000560861 RXRAP19793 462 aa13.21□□□□□ -0.29
SNX1-212ENST00000560861 METAP2P50579 478 aaKnown RBP eCLIP13.21□□□□□ -0.29
SNX1-212ENST00000560861 MAP3K10Q02779 954 aa13.21□□□□□ -0.29
SNX1-212ENST00000560861 IFIT1BQ5T764 474 aaKnown RBP13.21□□□□□ -0.29
SNX1-212ENST00000560861 C9orf131Q5VYM1 1079 aa13.21□□□□□ -0.29
SNX1-212ENST00000560861 NFXL1Q6ZNB6 911 aa13.21□□□□□ -0.29
SNX1-212ENST00000560861 SAMD7Q7Z3H4 446 aa13.21□□□□□ -0.29
SNX1-212ENST00000560861 MICU3Q86XE3 530 aa13.21□□□□□ -0.29
SNX1-212ENST00000560861 TNPO1Q92973 898 aaKnown RBP13.21□□□□□ -0.29
SNX1-212ENST00000560861 MTMR6Q9Y217 621 aa13.21□□□□□ -0.29
SNX1-212ENST00000560861 ASTN2O75129 1339 aaPredicted RBP13.2□□□□□ -0.3
SNX1-212ENST00000560861 ADD1P35611 737 aaKnown RBP13.2□□□□□ -0.3
SNX1-212ENST00000560861 HMGN5P82970 282 aaKnown RBP13.2□□□□□ -0.3
SNX1-212ENST00000560861 FUT2Q10981 343 aa13.2□□□□□ -0.3
SNX1-212ENST00000560861 RRP1BQ14684 758 aaKnown RBP13.2□□□□□ -0.3
SNX1-212ENST00000560861 KIF4BQ2VIQ3 1234 aa13.2□□□□□ -0.3
SNX1-212ENST00000560861 TBC1D10BQ4KMP7 808 aaPredicted RBP13.2□□□□□ -0.3
SNX1-212ENST00000560861 CDAN1Q8IWY9 1227 aa13.2□□□□□ -0.3
SNX1-212ENST00000560861 FANCBQ8NB91 859 aa13.2□□□□□ -0.3
SNX1-212ENST00000560861 TRPM4Q8TD43 1214 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms