RNA–Protein interactions for RNA: ENST00000558190.5

ATXN3-248, Transcript of ataxin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATXN3, Length 26,812 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-248ENST00000558190 IQCGQ9H095 443 aaKnown RBP4.09□□□□□ -1.76
ATXN3-248ENST00000558190 DBR1Q9UK59 544 aaKnown RBP4.09□□□□□ -1.76
ATXN3-248ENST00000558190 RPS6KB1P23443 525 aa4.09□□□□□ -1.76
ATXN3-248ENST00000558190 MYO1EQ12965 1108 aa4.09□□□□□ -1.76
ATXN3-248ENST00000558190 IFIT5Q13325 482 aaKnown RBP4.09□□□□□ -1.76
ATXN3-248ENST00000558190 TXNDC2Q86VQ3 553 aa4.09□□□□□ -1.76
ATXN3-248ENST00000558190 NDUFA8P51970 172 aa4.09□□□□□ -1.76
ATXN3-248ENST00000558190 CHCHD3Q9NX63 227 aaKnown RBP4.09□□□□□ -1.76
ATXN3-248ENST00000558190 CCND1P24385 295 aa4.09□□□□□ -1.76
ATXN3-248ENST00000558190 EIF4A3P38919 411 aaKnown RBP4.09□□□□□ -1.76
ATXN3-248ENST00000558190 RAD23BP54727 409 aa4.09□□□□□ -1.76
ATXN3-248ENST00000558190 SLC9C2Q5TAH2 1124 aa4.09□□□□□ -1.76
ATXN3-248ENST00000558190 BICDL1Q6ZP65 573 aa4.09□□□□□ -1.76
ATXN3-248ENST00000558190 CCDC138Q96M89 665 aa4.09□□□□□ -1.76
ATXN3-248ENST00000558190 ZC4H2Q9NQZ6 224 aa4.09□□□□□ -1.76
ATXN3-248ENST00000558190 FAM170AA1A519 330 aa4.09□□□□□ -1.76
ATXN3-248ENST00000558190 PRR29P0C7W0 189 aa4.09□□□□□ -1.76
ATXN3-248ENST00000558190 PPP1R21Q6ZMI0 780 aa4.09□□□□□ -1.76
ATXN3-248ENST00000558190 RPGRIP1Q96KN7 1286 aa4.09□□□□□ -1.76
ATXN3-248ENST00000558190 STAT6P42226 847 aa4.09□□□□□ -1.76
ATXN3-248ENST00000558190 INTUQ9ULD6 942 aa4.09□□□□□ -1.76
ATXN3-248ENST00000558190 PDE6BP35913 854 aa4.08□□□□□ -1.76
ATXN3-248ENST00000558190 KRT40Q6A162 431 aa4.08□□□□□ -1.76
ATXN3-248ENST00000558190 TMCO5AQ8N6Q1 288 aa4.08□□□□□ -1.76
ATXN3-248ENST00000558190 SEPT8Q92599 483 aa4.08□□□□□ -1.76
ATXN3-248ENST00000558190 CXCR5P32302 372 aa4.08□□□□□ -1.76
ATXN3-248ENST00000558190 MSH2P43246 934 aa4.08□□□□□ -1.76
ATXN3-248ENST00000558190 SEC24CP53992 1094 aa4.08□□□□□ -1.76
ATXN3-248ENST00000558190 KCNB1Q14721 858 aa4.08□□□□□ -1.76
ATXN3-248ENST00000558190 SLCO1A2P46721 670 aa4.08□□□□□ -1.76
ATXN3-248ENST00000558190 TMED10P49755 219 aaKnown RBP4.08□□□□□ -1.76
ATXN3-248ENST00000558190 PPP2R5EQ16537 467 aa4.08□□□□□ -1.76
ATXN3-248ENST00000558190 TMEM154Q6P9G4 183 aa4.08□□□□□ -1.76
ATXN3-248ENST00000558190 ARL10Q8N8L6 244 aa4.08□□□□□ -1.76
ATXN3-248ENST00000558190 CCDC15Q0P6D6 951 aa4.08□□□□□ -1.76
ATXN3-248ENST00000558190 LLGL1Q15334 1064 aa4.08□□□□□ -1.76
ATXN3-248ENST00000558190 CCDC84Q86UT8 332 aaPredicted RBP4.08□□□□□ -1.76
ATXN3-248ENST00000558190 TEKT4Q8WW24 435 aa4.08□□□□□ -1.76
ATXN3-248ENST00000558190 HAUS4Q9H6D7 363 aa4.08□□□□□ -1.76
ATXN3-248ENST00000558190 ALG13Q9NP73 1137 aaKnown RBP4.08□□□□□ -1.76
ATXN3-248ENST00000558190 ARHGAP10A1A4S6 786 aa4.08□□□□□ -1.76
ATXN3-248ENST00000558190 INTS8Q75QN2 995 aaKnown RBP4.08□□□□□ -1.76
ATXN3-248ENST00000558190 CSGALNACT2Q8N6G5 542 aa4.08□□□□□ -1.76
ATXN3-248ENST00000558190 RNF41Q9H4P4 317 aaPredicted RBP4.08□□□□□ -1.76
ATXN3-248ENST00000558190 RTEL1Q9NZ71 1219 aa4.08□□□□□ -1.76
ATXN3-248ENST00000558190 SLC9C1Q4G0N8 1177 aa4.08□□□□□ -1.76
ATXN3-248ENST00000558190 MYSM1Q5VVJ2 828 aa4.08□□□□□ -1.76
ATXN3-248ENST00000558190 ANKRD35Q8N283 1001 aa4.08□□□□□ -1.76
ATXN3-248ENST00000558190 BICC1Q9H694 974 aaKnown RBP4.08□□□□□ -1.76
ATXN3-248ENST00000558190 SCINQ9Y6U3 715 aa4.08□□□□□ -1.76
ATXN3-248ENST00000558190 CTIFO43310 598 aaKnown RBP4.08□□□□□ -1.76
ATXN3-248ENST00000558190 ART3Q13508 389 aa4.08□□□□□ -1.76
ATXN3-248ENST00000558190 CUL3Q13618 768 aa4.08□□□□□ -1.76
ATXN3-248ENST00000558190 RASA3Q14644 834 aa4.08□□□□□ -1.76
ATXN3-248ENST00000558190 RPGRQ92834 1020 aaKnown RBP4.08□□□□□ -1.76
ATXN3-248ENST00000558190 ATP6V0A1Q93050 837 aa4.08□□□□□ -1.76
ATXN3-248ENST00000558190 TSNARE1Q96NA8 513 aa4.08□□□□□ -1.76
ATXN3-248ENST00000558190 BUB1O43683 1085 aa4.08□□□□□ -1.76
ATXN3-248ENST00000558190 EEF1B2P24534 225 aaKnown RBP4.08□□□□□ -1.76
ATXN3-248ENST00000558190 WDR24Q96S15 920 aa4.08□□□□□ -1.76
ATXN3-248ENST00000558190 TXKP42681 527 aa4.08□□□□□ -1.76
ATXN3-248ENST00000558190 CARD14Q9BXL6 1004 aa4.08□□□□□ -1.76
ATXN3-248ENST00000558190 HDAC9Q9UKV0 1011 aa4.08□□□□□ -1.76
ATXN3-248ENST00000558190 KCNJ14Q9UNX9 436 aa4.08□□□□□ -1.76
ATXN3-248ENST00000558190 PRPHP41219 470 aa4.08□□□□□ -1.76
ATXN3-248ENST00000558190 RNF217Q8TC41 542 aa4.08□□□□□ -1.76
ATXN3-248ENST00000558190 NOP53Q9NZM5 478 aaKnown RBP4.08□□□□□ -1.76
ATXN3-248ENST00000558190 FHOD1Q9Y613 1164 aa4.08□□□□□ -1.76
ATXN3-248ENST00000558190 JAK2O60674 1132 aa4.08□□□□□ -1.76
ATXN3-248ENST00000558190 DNAJC6O75061 913 aa4.08□□□□□ -1.76
ATXN3-248ENST00000558190 SPDYE1Q8NFV5 336 aaPredicted RBP4.08□□□□□ -1.76
ATXN3-248ENST00000558190 AMFRQ9UKV5 643 aa4.08□□□□□ -1.76
ATXN3-248ENST00000558190 CLIC4Q9Y696 253 aa4.08□□□□□ -1.76
ATXN3-248ENST00000558190 MEFVO15553 781 aaPredicted RBP4.08□□□□□ -1.76
ATXN3-248ENST00000558190 SLC8A3P57103 927 aa4.08□□□□□ -1.76
ATXN3-248ENST00000558190 SLC35F6Q8N357 371 aa4.08□□□□□ -1.76
ATXN3-248ENST00000558190 MDM1Q8TC05 714 aa4.08□□□□□ -1.76
ATXN3-248ENST00000558190 EEF2KMTQ96G04 330 aa4.08□□□□□ -1.76
ATXN3-248ENST00000558190 KDM2BQ8NHM5 1336 aa4.08□□□□□ -1.76
ATXN3-248ENST00000558190 PER1O15534 1290 aaPredicted RBP4.08□□□□□ -1.76
ATXN3-248ENST00000558190 TMEM60Q9H2L4 133 aa4.08□□□□□ -1.76
ATXN3-248ENST00000558190 DESP17661 470 aa4.08□□□□□ -1.76
ATXN3-248ENST00000558190 ATICP31939 592 aa4.08□□□□□ -1.76
ATXN3-248ENST00000558190 NLRP7Q8WX94 980 aa4.08□□□□□ -1.76
ATXN3-248ENST00000558190 PAIP2BQ9ULR5 123 aaKnown RBP4.08□□□□□ -1.76
ATXN3-248ENST00000558190 FAM83GA6ND36 823 aa4.08□□□□□ -1.76
ATXN3-248ENST00000558190 NUTM2BA6NNL0 878 aaPredicted RBP4.08□□□□□ -1.76
ATXN3-248ENST00000558190 NUTM2EB1AL46 878 aaPredicted RBP4.08□□□□□ -1.76
ATXN3-248ENST00000558190 FAM13AO94988 1023 aa4.08□□□□□ -1.76
ATXN3-248ENST00000558190 CDC37Q16543 378 aaPredicted RBP4.08□□□□□ -1.76
ATXN3-248ENST00000558190 HERC4Q5GLZ8 1057 aaPredicted RBP4.08□□□□□ -1.76
ATXN3-248ENST00000558190 WDR44Q5JSH3 913 aa4.08□□□□□ -1.76
ATXN3-248ENST00000558190 SEC23IPQ9Y6Y8 1000 aaKnown RBP4.08□□□□□ -1.76
ATXN3-248ENST00000558190 HSPA1LP34931 641 aa4.08□□□□□ -1.76
ATXN3-248ENST00000558190 GUCY1A3Q02108 690 aa4.08□□□□□ -1.76
ATXN3-248ENST00000558190 KLHL30Q0D2K2 578 aa4.08□□□□□ -1.76
ATXN3-248ENST00000558190 UBL4BQ8N7F7 174 aa4.08□□□□□ -1.76
ATXN3-248ENST00000558190 KLHDC4Q8TBB5 520 aa4.08□□□□□ -1.76
ATXN3-248ENST00000558190 TMEM259Q4ZIN3 620 aa4.08□□□□□ -1.76
ATXN3-248ENST00000558190 BRAPQ7Z569 592 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms