RNA–Protein interactions for RNA: ENST00000557866.1

SPG11-204, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 2

Gene SPG11, Length 468 nt, Biotype non stop decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-204ENST00000557866 MAP3K12Q12852 859 aa8.77□□□□□ -1.01
SPG11-204ENST00000557866 PKP1Q13835 747 aa8.77□□□□□ -1.01
SPG11-204ENST00000557866 TOB2Q14106 344 aaPredicted RBP8.77□□□□□ -1.01
SPG11-204ENST00000557866 KRT32Q14532 448 aa8.77□□□□□ -1.01
SPG11-204ENST00000557866 CAVIN4Q5BKX8 364 aa8.77□□□□□ -1.01
SPG11-204ENST00000557866 BLOC1S2Q6QNY1 142 aa8.77□□□□□ -1.01
SPG11-204ENST00000557866 C15orf52Q6ZUT6 534 aaKnown RBP8.77□□□□□ -1.01
SPG11-204ENST00000557866 ARMC2Q8NEN0 867 aa8.77□□□□□ -1.01
SPG11-204ENST00000557866 ZNF384Q8TF68 577 aa8.77□□□□□ -1.01
SPG11-204ENST00000557866 INTS4Q96HW7 963 aaKnown RBP8.77□□□□□ -1.01
SPG11-204ENST00000557866 NEK1Q96PY6 1258 aa8.77□□□□□ -1.01
SPG11-204ENST00000557866 CWC22Q9HCG8 908 aaKnown RBP8.77□□□□□ -1.01
SPG11-204ENST00000557866 ATP13A2Q9NQ11 1180 aa8.77□□□□□ -1.01
SPG11-204ENST00000557866 MAP10Q9P2G4 905 aa8.77□□□□□ -1.01
SPG11-204ENST00000557866 DENND2AQ9ULE3 1009 aa8.77□□□□□ -1.01
SPG11-204ENST00000557866 LIMCH1Q9UPQ0 1083 aa8.77□□□□□ -1.01
SPG11-204ENST00000557866 LEMD3Q9Y2U8 911 aa8.77□□□□□ -1.01
SPG11-204ENST00000557866 XDHP47989 1333 aa8.77□□□□□ -1.01
SPG11-204ENST00000557866 TAF1P21675 1872 aa8.77□□□□□ -1.01
SPG11-204ENST00000557866 E7EWF7 191 aa8.76□□□□□ -1.01
SPG11-204ENST00000557866 BBOX1O75936 387 aa8.76□□□□□ -1.01
SPG11-204ENST00000557866 MBD4O95243 580 aa8.76□□□□□ -1.01
SPG11-204ENST00000557866 SRGNP10124 158 aa8.76□□□□□ -1.01
SPG11-204ENST00000557866 HAND2P61296 217 aa8.76□□□□□ -1.01
SPG11-204ENST00000557866 EXOSC10Q01780 885 aaKnown RBP8.76□□□□□ -1.01
SPG11-204ENST00000557866 SKIV2LQ15477 1246 aaKnown RBP8.76□□□□□ -1.01
SPG11-204ENST00000557866 ALX1Q15699 326 aa8.76□□□□□ -1.01
SPG11-204ENST00000557866 ME3Q16798 604 aa8.76□□□□□ -1.01
SPG11-204ENST00000557866 DEFB132Q7Z7B7 95 aa8.76□□□□□ -1.01
SPG11-204ENST00000557866 ADGRA1Q86SQ6 560 aa8.76□□□□□ -1.01
SPG11-204ENST00000557866 VPS37DQ86XT2 251 aa8.76□□□□□ -1.01
SPG11-204ENST00000557866 TNPO1Q92973 898 aaKnown RBP8.76□□□□□ -1.01
SPG11-204ENST00000557866 ARMT1Q9H993 441 aa8.76□□□□□ -1.01
SPG11-204ENST00000557866 SENP2Q9HC62 589 aa8.76□□□□□ -1.01
SPG11-204ENST00000557866 EPB41L4AQ9HCS5 686 aaPredicted RBP8.76□□□□□ -1.01
SPG11-204ENST00000557866 ANKIB1Q9P2G1 1089 aa8.76□□□□□ -1.01
SPG11-204ENST00000557866 LRP2BPQ9P2M1 347 aa8.76□□□□□ -1.01
SPG11-204ENST00000557866 TPCN1Q9ULQ1 816 aa8.76□□□□□ -1.01
SPG11-204ENST00000557866 ZDHHC9Q9Y397 364 aa8.76□□□□□ -1.01
SPG11-204ENST00000557866 PARP3Q9Y6F1 533 aa8.76□□□□□ -1.01
SPG11-204ENST00000557866 PDS5AQ29RF7 1337 aaKnown RBP8.76□□□□□ -1.01
SPG11-204ENST00000557866 PRKAB2O43741 272 aa8.75□□□□□ -1.01
SPG11-204ENST00000557866 UFL1O94874 794 aa8.75□□□□□ -1.01
SPG11-204ENST00000557866 CYP7A1P22680 504 aa8.75□□□□□ -1.01
SPG11-204ENST00000557866 ATP2B4P23634 1241 aa8.75□□□□□ -1.01
SPG11-204ENST00000557866 CHAF1AQ13111 956 aaPredicted RBP8.75□□□□□ -1.01
SPG11-204ENST00000557866 LCORLQ8N3X6 602 aa8.75□□□□□ -1.01
SPG11-204ENST00000557866 TDRD7Q8NHU6 1098 aaKnown RBP8.75□□□□□ -1.01
SPG11-204ENST00000557866 FAM174AQ8TBP5 190 aa8.75□□□□□ -1.01
SPG11-204ENST00000557866 LRRC2Q9BYS8 371 aa8.75□□□□□ -1.01
SPG11-204ENST00000557866 PDGFDQ9GZP0 370 aaPredicted RBP8.75□□□□□ -1.01
SPG11-204ENST00000557866 GPBP1L1Q9HC44 474 aaPredicted RBP8.75□□□□□ -1.01
SPG11-204ENST00000557866 STK32BQ9NY57 414 aa8.75□□□□□ -1.01
SPG11-204ENST00000557866 PODXL2Q9NZ53 605 aa8.75□□□□□ -1.01
SPG11-204ENST00000557866 ABCF2Q9UG63 623 aa8.75□□□□□ -1.01
SPG11-204ENST00000557866 POLLQ9UGP5 575 aa8.75□□□□□ -1.01
SPG11-204ENST00000557866 CTNNA3Q9UI47 895 aa8.75□□□□□ -1.01
SPG11-204ENST00000557866 JAG2Q9Y219 1238 aa8.75□□□□□ -1.01
SPG11-204ENST00000557866 TACC3Q9Y6A5 838 aa8.75□□□□□ -1.01
SPG11-204ENST00000557866 GSG1L2A8MUP6 293 aa8.74□□□□□ -1.01
SPG11-204ENST00000557866 PATL2C9JE40 543 aaKnown RBP8.74□□□□□ -1.01
SPG11-204ENST00000557866 DTNBO60941 627 aa8.74□□□□□ -1.01
SPG11-204ENST00000557866 NPR1P16066 1061 aa8.74□□□□□ -1.01
SPG11-204ENST00000557866 MCM4P33991 863 aa8.74□□□□□ -1.01
SPG11-204ENST00000557866 GRIK5Q16478 980 aa8.74□□□□□ -1.01
SPG11-204ENST00000557866 IMMTQ16891 758 aaKnown RBP8.74□□□□□ -1.01
SPG11-204ENST00000557866 SH3D19Q5HYK7 790 aa8.74□□□□□ -1.01
SPG11-204ENST00000557866 OLFM4Q6UX06 510 aa8.74□□□□□ -1.01
SPG11-204ENST00000557866 Q6ZUG5 572 aa8.74□□□□□ -1.01
SPG11-204ENST00000557866 DHX32Q7L7V1 743 aaKnown RBP8.74□□□□□ -1.01
SPG11-204ENST00000557866 TBC1D10CQ8IV04 446 aa8.74□□□□□ -1.01
SPG11-204ENST00000557866 SP8Q8IXZ3 490 aa8.74□□□□□ -1.01
SPG11-204ENST00000557866 NECAB1Q8N987 351 aa8.74□□□□□ -1.01
SPG11-204ENST00000557866 MIGA1Q8NAN2 632 aa8.74□□□□□ -1.01
SPG11-204ENST00000557866 TBC1D16Q8TBP0 767 aa8.74□□□□□ -1.01
SPG11-204ENST00000557866 AIDAQ96BJ3 306 aa8.74□□□□□ -1.01
SPG11-204ENST00000557866 ZSCAN31Q96LW9 406 aaPredicted RBP8.74□□□□□ -1.01
SPG11-204ENST00000557866 RIOK1Q9BRS2 568 aaKnown RBP8.74□□□□□ -1.01
SPG11-204ENST00000557866 SH2B1Q9NRF2 756 aaPredicted RBP8.74□□□□□ -1.01
SPG11-204ENST00000557866 RAI14Q9P0K7 980 aa8.74□□□□□ -1.01
SPG11-204ENST00000557866 GGA1Q9UJY5 639 aa8.74□□□□□ -1.01
SPG11-204ENST00000557866 NSFL1CQ9UNZ2 370 aaKnown RBP8.74□□□□□ -1.01
SPG11-204ENST00000557866 ATP6V0A2Q9Y487 856 aa8.74□□□□□ -1.01
SPG11-204ENST00000557866 A0A1B0GUL6 1792 aa8.73□□□□□ -1.01
SPG11-204ENST00000557866 PRDX5P30044 214 aa8.73□□□□□ -1.01
SPG11-204ENST00000557866 PDE6BP35913 854 aa8.73□□□□□ -1.01
SPG11-204ENST00000557866 ANTXR2P58335 489 aa8.73□□□□□ -1.01
SPG11-204ENST00000557866 DYNLL1P63167 89 aaKnown RBP8.73□□□□□ -1.01
SPG11-204ENST00000557866 NUCB2P80303 420 aa8.73□□□□□ -1.01
SPG11-204ENST00000557866 MECOMQ03112 1051 aa8.73□□□□□ -1.01
SPG11-204ENST00000557866 TMC4Q7Z404 712 aa8.73□□□□□ -1.01
SPG11-204ENST00000557866 BPHLQ86WA6 291 aaPredicted RBP8.73□□□□□ -1.01
SPG11-204ENST00000557866 CCDC83Q8IWF9 413 aa8.73□□□□□ -1.01
SPG11-204ENST00000557866 MB21D2Q8IYB1 491 aaPredicted RBP8.73□□□□□ -1.01
SPG11-204ENST00000557866 IFNL3Q8IZI9 196 aa8.73□□□□□ -1.01
SPG11-204ENST00000557866 FOXJ1Q92949 421 aa8.73□□□□□ -1.01
SPG11-204ENST00000557866 NSUN4Q96CB9 384 aaKnown RBP8.73□□□□□ -1.01
SPG11-204ENST00000557866 AGXT2Q9BYV1 514 aa8.73□□□□□ -1.01
SPG11-204ENST00000557866 FAM117AQ9C073 453 aa8.73□□□□□ -1.01
SPG11-204ENST00000557866 CD209Q9NNX6 404 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms