RNA–Protein interactions for RNA: ENST00000553278.1

SCFD1-208, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 795 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-208ENST00000553278 DHRS4Q9BTZ2 278 aa7.79□□□□□ -1.16
SCFD1-208ENST00000553278 ATP13A2Q9NQ11 1180 aa7.79□□□□□ -1.16
SCFD1-208ENST00000553278 THRAP3Q9Y2W1 955 aaKnown RBP7.79□□□□□ -1.16
SCFD1-208ENST00000553278 TRAV20A0A0B4J274 112 aa7.78□□□□□ -1.16
SCFD1-208ENST00000553278 DNAJA2O60884 412 aa7.78□□□□□ -1.16
SCFD1-208ENST00000553278 PEX14O75381 377 aa7.78□□□□□ -1.16
SCFD1-208ENST00000553278 RGS9O75916 674 aaPredicted RBP7.78□□□□□ -1.16
SCFD1-208ENST00000553278 RAPGEF3O95398 923 aa7.78□□□□□ -1.16
SCFD1-208ENST00000553278 PGRP06401 933 aa7.78□□□□□ -1.16
SCFD1-208ENST00000553278 CPEP16870 476 aa7.78□□□□□ -1.16
SCFD1-208ENST00000553278 MAOBP27338 520 aa7.78□□□□□ -1.16
SCFD1-208ENST00000553278 CDC25BP30305 580 aa7.78□□□□□ -1.16
SCFD1-208ENST00000553278 L1CAMP32004 1257 aa7.78□□□□□ -1.16
SCFD1-208ENST00000553278 CCNFP41002 786 aa7.78□□□□□ -1.16
SCFD1-208ENST00000553278 TBX4P57082 545 aa7.78□□□□□ -1.16
SCFD1-208ENST00000553278 HSP90AA2PQ14568 343 aaPredicted RBP7.78□□□□□ -1.16
SCFD1-208ENST00000553278 ATL2Q8NHH9 583 aa7.78□□□□□ -1.16
SCFD1-208ENST00000553278 KISS1RQ969F8 398 aaPredicted RBP7.78□□□□□ -1.16
SCFD1-208ENST00000553278 C8orf48Q96LL4 319 aa7.78□□□□□ -1.16
SCFD1-208ENST00000553278 FAM126AQ9BYI3 521 aaPredicted RBP7.78□□□□□ -1.16
SCFD1-208ENST00000553278 MRPS23Q9Y3D9 190 aaKnown RBP7.78□□□□□ -1.16
SCFD1-208ENST00000553278 PRAMEF27A3QJZ7 478 aa7.77□□□□□ -1.17
SCFD1-208ENST00000553278 GPR25O00155 361 aa7.77□□□□□ -1.17
SCFD1-208ENST00000553278 C2CD2LO14523 706 aa7.77□□□□□ -1.17
SCFD1-208ENST00000553278 ADH6P28332 368 aa7.77□□□□□ -1.17
SCFD1-208ENST00000553278 GRK4P32298 578 aa7.77□□□□□ -1.17
SCFD1-208ENST00000553278 YARSP54577 528 aaKnown RBP7.77□□□□□ -1.17
SCFD1-208ENST00000553278 FAM50AQ14320 339 aaKnown RBP7.77□□□□□ -1.17
SCFD1-208ENST00000553278 AKAP4Q5JQC9 854 aa7.77□□□□□ -1.17
SCFD1-208ENST00000553278 HP1BP3Q5SSJ5 553 aaPredicted RBP7.77□□□□□ -1.17
SCFD1-208ENST00000553278 LCE2AQ5TA79 106 aaPredicted RBP7.77□□□□□ -1.17
SCFD1-208ENST00000553278 FOXB2Q5VYV0 432 aa7.77□□□□□ -1.17
SCFD1-208ENST00000553278 RNF180Q86T96 592 aa7.77□□□□□ -1.17
SCFD1-208ENST00000553278 IL22RA1Q8N6P7 574 aa7.77□□□□□ -1.17
SCFD1-208ENST00000553278 UBR7Q8N806 425 aa7.77□□□□□ -1.17
SCFD1-208ENST00000553278 RELTQ969Z4 430 aa7.77□□□□□ -1.17
SCFD1-208ENST00000553278 EXOC2Q96KP1 924 aa7.77□□□□□ -1.17
SCFD1-208ENST00000553278 OSGEPQ9NPF4 335 aa7.77□□□□□ -1.17
SCFD1-208ENST00000553278 DACH1Q9UI36 760 aa7.77□□□□□ -1.17
SCFD1-208ENST00000553278 TRBV23-1A0A0A0MS06 115 aa7.76□□□□□ -1.17
SCFD1-208ENST00000553278 A0A1W2PQU0 124 aa7.76□□□□□ -1.17
SCFD1-208ENST00000553278 ANKRD34BA5PLL1 514 aa7.76□□□□□ -1.17
SCFD1-208ENST00000553278 GSG1L2A8MUP6 293 aa7.76□□□□□ -1.17
SCFD1-208ENST00000553278 DCDC2CA8MYV0 355 aa7.76□□□□□ -1.17
SCFD1-208ENST00000553278 CHURC1-FNTBB4DL54 471 aa7.76□□□□□ -1.17
SCFD1-208ENST00000553278 ZNF862O60290 1169 aa7.76□□□□□ -1.17
SCFD1-208ENST00000553278 ARAFP10398 606 aa7.76□□□□□ -1.17
SCFD1-208ENST00000553278 EPHB1P54762 984 aa7.76□□□□□ -1.17
SCFD1-208ENST00000553278 ETF1P62495 437 aaKnown RBP7.76□□□□□ -1.17
SCFD1-208ENST00000553278 FAM209AQ5JX71 171 aa7.76□□□□□ -1.17
SCFD1-208ENST00000553278 AXDND1Q5T1B0 1012 aaPredicted RBP7.76□□□□□ -1.17
SCFD1-208ENST00000553278 SCUBE1Q8IWY4 988 aa7.76□□□□□ -1.17
SCFD1-208ENST00000553278 EXOC8Q8IYI6 725 aa7.76□□□□□ -1.17
SCFD1-208ENST00000553278 MORC4Q8TE76 937 aa7.76□□□□□ -1.17
SCFD1-208ENST00000553278 APBA2Q99767 749 aa7.76□□□□□ -1.17
SCFD1-208ENST00000553278 MRPL4Q9BYD3 311 aaKnown RBP7.76□□□□□ -1.17
SCFD1-208ENST00000553278 NRSN2Q9GZP1 204 aa7.76□□□□□ -1.17
SCFD1-208ENST00000553278 ARHGEF4Q9NR80 690 aa7.76□□□□□ -1.17
SCFD1-208ENST00000553278 INTS7Q9NVH2 962 aaKnown RBP7.76□□□□□ -1.17
SCFD1-208ENST00000553278 LRP2BPQ9P2M1 347 aa7.76□□□□□ -1.17
SCFD1-208ENST00000553278 DNAJC25-GNG10A0A024R161 153 aa7.75□□□□□ -1.17
SCFD1-208ENST00000553278 CDC14CA4D256 554 aa7.75□□□□□ -1.17
SCFD1-208ENST00000553278 ALDH1L1O75891 902 aa7.75□□□□□ -1.17
SCFD1-208ENST00000553278 ECEL1O95672 775 aa7.75□□□□□ -1.17
SCFD1-208ENST00000553278 SLFN14P0C7P3 912 aa7.75□□□□□ -1.17
SCFD1-208ENST00000553278 LIG1P18858 919 aa7.75□□□□□ -1.17
SCFD1-208ENST00000553278 PMS1P54277 932 aaKnown RBP7.75□□□□□ -1.17
SCFD1-208ENST00000553278 MAP7Q14244 749 aa7.75□□□□□ -1.17
SCFD1-208ENST00000553278 KIF4BQ2VIQ3 1234 aa7.75□□□□□ -1.17
SCFD1-208ENST00000553278 CNNM4Q6P4Q7 775 aa7.75□□□□□ -1.17
SCFD1-208ENST00000553278 FAM13CQ8NE31 585 aa7.75□□□□□ -1.17
SCFD1-208ENST00000553278 KIFC2Q96AC6 838 aa7.75□□□□□ -1.17
SCFD1-208ENST00000553278 AARSD1Q9BTE6 412 aaKnown RBP7.75□□□□□ -1.17
SCFD1-208ENST00000553278 PICK1Q9NRD5 415 aa7.75□□□□□ -1.17
SCFD1-208ENST00000553278 LOC100996750A0A140TA64 210 aa7.74□□□□□ -1.17
SCFD1-208ENST00000553278 LINC01387J3KSC0 135 aa7.74□□□□□ -1.17
SCFD1-208ENST00000553278 GUCY2FP51841 1108 aa7.74□□□□□ -1.17
SCFD1-208ENST00000553278 SUMO1P63165 101 aaKnown RBP7.74□□□□□ -1.17
SCFD1-208ENST00000553278 TTF1Q15361 905 aaPredicted RBP7.74□□□□□ -1.17
SCFD1-208ENST00000553278 DDX46Q7L014 1031 aaKnown RBP7.74□□□□□ -1.17
SCFD1-208ENST00000553278 SV2AQ7L0J3 742 aa7.74□□□□□ -1.17
SCFD1-208ENST00000553278 LRRTM3Q86VH5 581 aa7.74□□□□□ -1.17
SCFD1-208ENST00000553278 C12orf40Q86WS4 652 aa7.74□□□□□ -1.17
SCFD1-208ENST00000553278 PHACTR4Q8IZ21 702 aa7.74□□□□□ -1.17
SCFD1-208ENST00000553278 AHI1Q8N157 1196 aa7.74□□□□□ -1.17
SCFD1-208ENST00000553278 ACSF2Q96CM8 615 aaPredicted RBP7.74□□□□□ -1.17
SCFD1-208ENST00000553278 TARS2Q9BW92 718 aaKnown RBP7.74□□□□□ -1.17
SCFD1-208ENST00000553278 KRTAP4-6Q9BYQ5 205 aa7.74□□□□□ -1.17
SCFD1-208ENST00000553278 WNT10AQ9GZT5 417 aa7.74□□□□□ -1.17
SCFD1-208ENST00000553278 SENP2Q9HC62 589 aa7.74□□□□□ -1.17
SCFD1-208ENST00000553278 WASHC2CQ9Y4E1 1318 aa7.74□□□□□ -1.17
SCFD1-208ENST00000553278 ELOA3CA0A087WX78 387 aaPredicted RBP7.73□□□□□ -1.17
SCFD1-208ENST00000553278 ELOA3DA6NLF2 546 aaPredicted RBP7.73□□□□□ -1.17
SCFD1-208ENST00000553278 FSCN2O14926 492 aa7.73□□□□□ -1.17
SCFD1-208ENST00000553278 MX2P20592 715 aa7.73□□□□□ -1.17
SCFD1-208ENST00000553278 ALAS2P22557 587 aa7.73□□□□□ -1.17
SCFD1-208ENST00000553278 POLR2BP30876 1174 aaKnown RBP7.73□□□□□ -1.17
SCFD1-208ENST00000553278 ELOA3BQ3SY89 546 aa7.73□□□□□ -1.17
SCFD1-208ENST00000553278 ZC3H12AQ5D1E8 599 aaKnown RBP7.73□□□□□ -1.17
SCFD1-208ENST00000553278 HEATR6Q6AI08 1181 aaKnown RBP7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 91.7 ms