RNA–Protein interactions for RNA: ENST00000551516.1

CPSF6-207, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2 BASIC

Gene CPSF6, Length 234 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-207ENST00000551516 WDR17Q8IZU2 1322 aa3.42□□□□□ -1.86
CPSF6-207ENST00000551516 ARHGEF28Q8N1W1 1705 aaKnown RBP3.41□□□□□ -1.86
CPSF6-207ENST00000551516 ADCY9O60503 1353 aa3.41□□□□□ -1.86
CPSF6-207ENST00000551516 NFKBIEO00221 500 aa3.41□□□□□ -1.86
CPSF6-207ENST00000551516 ARAFP10398 606 aa3.41□□□□□ -1.86
CPSF6-207ENST00000551516 CPB1P15086 417 aa3.41□□□□□ -1.86
CPSF6-207ENST00000551516 ACPPP15309 386 aa3.41□□□□□ -1.86
CPSF6-207ENST00000551516 ITPKAP23677 461 aa3.41□□□□□ -1.86
CPSF6-207ENST00000551516 ADH6P28332 368 aa3.41□□□□□ -1.86
CPSF6-207ENST00000551516 GBP2P32456 591 aaPredicted RBP3.41□□□□□ -1.86
CPSF6-207ENST00000551516 GRIA4P48058 902 aa3.41□□□□□ -1.86
CPSF6-207ENST00000551516 RACK1P63244 317 aaKnown RBP3.41□□□□□ -1.86
CPSF6-207ENST00000551516 ZNF394Q53GI3 561 aa3.41□□□□□ -1.86
CPSF6-207ENST00000551516 TPTE2Q6XPS3 522 aa3.41□□□□□ -1.86
CPSF6-207ENST00000551516 SLC43A3Q8NBI5 491 aa3.41□□□□□ -1.86
CPSF6-207ENST00000551516 C3orf58Q8NDZ4 430 aa3.41□□□□□ -1.86
CPSF6-207ENST00000551516 DCAF11Q8TEB1 546 aa3.41□□□□□ -1.86
CPSF6-207ENST00000551516 ANKRD24Q8TF21 1146 aa3.41□□□□□ -1.86
CPSF6-207ENST00000551516 CNTNAP3BQ96NU0 1288 aa3.41□□□□□ -1.86
CPSF6-207ENST00000551516 CNTNAP3Q9BZ76 1288 aa3.41□□□□□ -1.86
CPSF6-207ENST00000551516 BHLHE41Q9C0J9 482 aaPredicted RBP3.41□□□□□ -1.86
CPSF6-207ENST00000551516 SPON1Q9HCB6 807 aa3.41□□□□□ -1.86
CPSF6-207ENST00000551516 MBIPQ9NS73 344 aa3.41□□□□□ -1.86
CPSF6-207ENST00000551516 SAMM50Q9Y512 469 aa3.41□□□□□ -1.86
CPSF6-207ENST00000551516 PCDHGB7Q9Y5F8 929 aa3.41□□□□□ -1.86
CPSF6-207ENST00000551516 PARP4Q9UKK3 1724 aaKnown RBP3.41□□□□□ -1.86
CPSF6-207ENST00000551516 TTC21BQ7Z4L5 1316 aa3.41□□□□□ -1.86
CPSF6-207ENST00000551516 LRRC37A3O60309 1634 aa3.41□□□□□ -1.86
CPSF6-207ENST00000551516 TRPM1Q7Z4N2 1603 aa3.41□□□□□ -1.86
CPSF6-207ENST00000551516 RGPD3A6NKT7 1758 aaPredicted RBP3.4□□□□□ -1.86
CPSF6-207ENST00000551516 RGPD4Q7Z3J3 1758 aa3.4□□□□□ -1.86
CPSF6-207ENST00000551516 ELOA3CA0A087WX78 387 aaPredicted RBP3.4□□□□□ -1.87
CPSF6-207ENST00000551516 OVOS2A0A0G2JMS6 1433 aa3.4□□□□□ -1.87
CPSF6-207ENST00000551516 OVOS2A0A0J9YW53 1432 aa3.4□□□□□ -1.87
CPSF6-207ENST00000551516 ELOA3DA6NLF2 546 aaPredicted RBP3.4□□□□□ -1.87
CPSF6-207ENST00000551516 MINDY4BA8MYZ0 360 aa3.4□□□□□ -1.87
CPSF6-207ENST00000551516 RGPD1P0DJD0 1748 aa3.4□□□□□ -1.87
CPSF6-207ENST00000551516 YBX3P16989 372 aaKnown RBP eCLIP3.4□□□□□ -1.87
CPSF6-207ENST00000551516 PTPRAP18433 802 aa3.4□□□□□ -1.87
CPSF6-207ENST00000551516 LMNB1P20700 586 aa3.4□□□□□ -1.87
CPSF6-207ENST00000551516 DNAJA1P31689 397 aaKnown RBP3.4□□□□□ -1.87
CPSF6-207ENST00000551516 ADH7P40394 386 aa3.4□□□□□ -1.87
CPSF6-207ENST00000551516 CABP4P57796 275 aa3.4□□□□□ -1.87
CPSF6-207ENST00000551516 C1QTNF8P60827 252 aa3.4□□□□□ -1.87
CPSF6-207ENST00000551516 ATP11AP98196 1134 aa3.4□□□□□ -1.87
CPSF6-207ENST00000551516 PPP2R3AQ06190 1150 aa3.4□□□□□ -1.87
CPSF6-207ENST00000551516 SPRED3Q2MJR0 410 aa3.4□□□□□ -1.87
CPSF6-207ENST00000551516 ELOA3BQ3SY89 546 aa3.4□□□□□ -1.87
CPSF6-207ENST00000551516 RPS26P11Q5JNZ5 115 aaPredicted RBP3.4□□□□□ -1.87
CPSF6-207ENST00000551516 DIEXFQ68CQ4 756 aaKnown RBP3.4□□□□□ -1.87
CPSF6-207ENST00000551516 OVOS2Q6IE36 1432 aa3.4□□□□□ -1.87
CPSF6-207ENST00000551516 ERMP1Q7Z2K6 904 aa3.4□□□□□ -1.87
CPSF6-207ENST00000551516 CACTIN-AS1Q8N1I8 211 aa3.4□□□□□ -1.87
CPSF6-207ENST00000551516 DNAJC5GQ8N7S2 189 aa3.4□□□□□ -1.87
CPSF6-207ENST00000551516 ELOA3Q8NG57 546 aa3.4□□□□□ -1.87
CPSF6-207ENST00000551516 SLC16A10Q8TF71 515 aa3.4□□□□□ -1.87
CPSF6-207ENST00000551516 BSNDQ8WZ55 320 aa3.4□□□□□ -1.87
CPSF6-207ENST00000551516 UBXN4Q92575 508 aa3.4□□□□□ -1.87
CPSF6-207ENST00000551516 PLD4Q96BZ4 506 aa3.4□□□□□ -1.87
CPSF6-207ENST00000551516 HHIPQ96QV1 700 aa3.4□□□□□ -1.87
CPSF6-207ENST00000551516 TESK2Q96S53 571 aa3.4□□□□□ -1.87
CPSF6-207ENST00000551516 POP1Q99575 1024 aaKnown RBP3.4□□□□□ -1.87
CPSF6-207ENST00000551516 TANGO6Q9C0B7 1094 aa3.4□□□□□ -1.87
CPSF6-207ENST00000551516 SMG9Q9H0W8 520 aaKnown RBP3.4□□□□□ -1.87
CPSF6-207ENST00000551516 SRA1Q9HD15 236 aaKnown RBP3.4□□□□□ -1.87
CPSF6-207ENST00000551516 SEC31BQ9NQW1 1179 aa3.4□□□□□ -1.87
CPSF6-207ENST00000551516 TMEM39AQ9NV64 488 aa3.4□□□□□ -1.87
CPSF6-207ENST00000551516 KBTBD4Q9NVX7 518 aa3.4□□□□□ -1.87
CPSF6-207ENST00000551516 FRRS1LQ9P0K9 344 aa3.4□□□□□ -1.87
CPSF6-207ENST00000551516 PRKAG2Q9UGJ0 569 aa3.4□□□□□ -1.87
CPSF6-207ENST00000551516 GPN3Q9UHW5 284 aaPredicted RBP3.4□□□□□ -1.87
CPSF6-207ENST00000551516 SLC6A14Q9UN76 642 aa3.4□□□□□ -1.87
CPSF6-207ENST00000551516 PNPLA7Q6ZV29 1317 aa3.4□□□□□ -1.87
CPSF6-207ENST00000551516 EIF3AQ14152 1382 aaKnown RBP3.39□□□□□ -1.87
CPSF6-207ENST00000551516 NCAPD2Q15021 1401 aa3.39□□□□□ -1.87
CPSF6-207ENST00000551516 NEURL1BA8MQ27 555 aa3.39□□□□□ -1.87
CPSF6-207ENST00000551516 ADARB2-AS1A8MUL3 147 aa3.39□□□□□ -1.87
CPSF6-207ENST00000551516 METTL12A8MUP2 240 aa3.39□□□□□ -1.87
CPSF6-207ENST00000551516 FBXO24O75426 580 aa3.39□□□□□ -1.87
CPSF6-207ENST00000551516 RGS9O75916 674 aaPredicted RBP3.39□□□□□ -1.87
CPSF6-207ENST00000551516 ZBTB7AO95365 584 aa3.39□□□□□ -1.87
CPSF6-207ENST00000551516 ATP2B1P20020 1258 aa3.39□□□□□ -1.87
CPSF6-207ENST00000551516 EIF4A3P38919 411 aaKnown RBP3.39□□□□□ -1.87
CPSF6-207ENST00000551516 TNNI2P48788 182 aa3.39□□□□□ -1.87
CPSF6-207ENST00000551516 ARID5AQ03989 594 aa3.39□□□□□ -1.87
CPSF6-207ENST00000551516 MAP3K11Q16584 847 aa3.39□□□□□ -1.87
CPSF6-207ENST00000551516 PERM1Q5SV97 790 aa3.39□□□□□ -1.87
CPSF6-207ENST00000551516 GOLGA6L1Q8N7Z2 621 aa3.39□□□□□ -1.87
CPSF6-207ENST00000551516 NGDNQ8NEJ9 315 aaKnown RBP3.39□□□□□ -1.87
CPSF6-207ENST00000551516 NLGN2Q8NFZ4 835 aa3.39□□□□□ -1.87
CPSF6-207ENST00000551516 DDX54Q8TDD1 881 aaKnown RBP3.39□□□□□ -1.87
CPSF6-207ENST00000551516 TTC9Q92623 222 aa3.39□□□□□ -1.87
CPSF6-207ENST00000551516 SPATA32Q96LK8 384 aa3.39□□□□□ -1.87
CPSF6-207ENST00000551516 TMEM74Q96NL1 305 aa3.39□□□□□ -1.87
CPSF6-207ENST00000551516 NECAB3Q96P71 396 aaPredicted RBP3.39□□□□□ -1.87
CPSF6-207ENST00000551516 TINF2Q9BSI4 451 aa3.39□□□□□ -1.87
CPSF6-207ENST00000551516 SPON2Q9BUD6 331 aa3.39□□□□□ -1.87
CPSF6-207ENST00000551516 MTFR1LQ9H019 292 aa3.39□□□□□ -1.87
CPSF6-207ENST00000551516 MUC3BQ9H195 1237 aa3.39□□□□□ -1.87
CPSF6-207ENST00000551516 CLEC4MQ9H2X3 399 aaPredicted RBP3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms