RNA–Protein interactions for RNA: ENST00000544327.1

SCARB1-208, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5 BASIC

Gene SCARB1, Length 1,812 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-208ENST00000544327 BICDL1Q6ZP65 573 aa20.37■□□□□ 0.85
SCARB1-208ENST00000544327 CATIPQ7Z7H3 387 aa20.37■□□□□ 0.85
SCARB1-208ENST00000544327 IQCA1Q86XH1 822 aa20.37■□□□□ 0.85
SCARB1-208ENST00000544327 CNNM3Q8NE01 707 aa20.37■□□□□ 0.85
SCARB1-208ENST00000544327 XPO4Q9C0E2 1151 aaKnown RBP20.37■□□□□ 0.85
SCARB1-208ENST00000544327 IRS2Q9Y4H2 1338 aa20.37■□□□□ 0.85
SCARB1-208ENST00000544327 SKILP12757 684 aa20.37■□□□□ 0.85
SCARB1-208ENST00000544327 HIBADHP31937 336 aaKnown RBP20.37■□□□□ 0.85
SCARB1-208ENST00000544327 NT5C2P49902 561 aa20.37■□□□□ 0.85
SCARB1-208ENST00000544327 PNOCQ13519 176 aa20.37■□□□□ 0.85
SCARB1-208ENST00000544327 ARID5BQ14865 1188 aa20.37■□□□□ 0.85
SCARB1-208ENST00000544327 PKN1Q16512 942 aa20.37■□□□□ 0.85
SCARB1-208ENST00000544327 IFIT1BQ5T764 474 aaKnown RBP20.37■□□□□ 0.85
SCARB1-208ENST00000544327 CCDC150Q8NCX0 1101 aa20.37■□□□□ 0.85
SCARB1-208ENST00000544327 HSD3B7Q9H2F3 369 aa20.37■□□□□ 0.85
SCARB1-208ENST00000544327 ATP8A2Q9NTI2 1148 aa20.37■□□□□ 0.85
SCARB1-208ENST00000544327 SRPRBQ9Y5M8 271 aaKnown RBP20.37■□□□□ 0.85
SCARB1-208ENST00000544327 CCDC88AQ3V6T2 1871 aa20.36■□□□□ 0.85
SCARB1-208ENST00000544327 RIOK3O14730 519 aaKnown RBP20.36■□□□□ 0.85
SCARB1-208ENST00000544327 TOM1O60784 492 aa20.36■□□□□ 0.85
SCARB1-208ENST00000544327 AKAP17AQ02040 695 aaKnown RBP20.36■□□□□ 0.85
SCARB1-208ENST00000544327 MECOMQ03112 1051 aa20.36■□□□□ 0.85
SCARB1-208ENST00000544327 SBK1Q52WX2 424 aa20.36■□□□□ 0.85
SCARB1-208ENST00000544327 NT5DC1Q5TFE4 455 aa20.36■□□□□ 0.85
SCARB1-208ENST00000544327 FILIP1Q7Z7B0 1213 aa20.36■□□□□ 0.85
SCARB1-208ENST00000544327 NBPF5PQ86XG9 351 aaPredicted RBP20.36■□□□□ 0.85
SCARB1-208ENST00000544327 PHF20Q9BVI0 1012 aa20.36■□□□□ 0.85
SCARB1-208ENST00000544327 IFNKQ9P0W0 207 aa20.36■□□□□ 0.85
SCARB1-208ENST00000544327 SMIM22K7EJ46 135 aa20.35■□□□□ 0.85
SCARB1-208ENST00000544327 CTIFO43310 598 aaKnown RBP20.35■□□□□ 0.85
SCARB1-208ENST00000544327 KLRK1P26718 216 aa20.35■□□□□ 0.85
SCARB1-208ENST00000544327 MYL5Q02045 173 aa20.35■□□□□ 0.85
SCARB1-208ENST00000544327 TROAPQ12815 778 aa20.35■□□□□ 0.85
SCARB1-208ENST00000544327 NR5A1Q13285 461 aa20.35■□□□□ 0.85
SCARB1-208ENST00000544327 TPTE2Q6XPS3 522 aa20.35■□□□□ 0.85
SCARB1-208ENST00000544327 CMTR1Q8N1G2 835 aaKnown RBP20.35■□□□□ 0.85
SCARB1-208ENST00000544327 SHISA4Q96DD7 197 aa20.35■□□□□ 0.85
SCARB1-208ENST00000544327 CRNKL1Q9BZJ0 848 aaKnown RBP20.35■□□□□ 0.85
SCARB1-208ENST00000544327 SRP68Q9UHB9 627 aaKnown RBP20.35■□□□□ 0.85
SCARB1-208ENST00000544327 PAXBP1Q9Y5B6 917 aa20.35■□□□□ 0.85
SCARB1-208ENST00000544327 PCDHB6Q9Y5E3 794 aa20.35■□□□□ 0.85
SCARB1-208ENST00000544327 LY75O60449 1722 aa20.35■□□□□ 0.85
SCARB1-208ENST00000544327 CYP2D7A0A087X1C5 515 aa20.34■□□□□ 0.85
SCARB1-208ENST00000544327 ZPR1O75312 459 aa20.34■□□□□ 0.85
SCARB1-208ENST00000544327 TNNT1P13805 278 aa20.34■□□□□ 0.85
SCARB1-208ENST00000544327 TM4SF1P30408 202 aa20.34■□□□□ 0.85
SCARB1-208ENST00000544327 KCNJ6P48051 423 aa20.34■□□□□ 0.85
SCARB1-208ENST00000544327 KCNQ4P56696 695 aa20.34■□□□□ 0.85
SCARB1-208ENST00000544327 FANCCQ00597 558 aa20.34■□□□□ 0.85
SCARB1-208ENST00000544327 TPD52L1Q16890 204 aaPredicted RBP20.34■□□□□ 0.85
SCARB1-208ENST00000544327 FOXP4Q8IVH2 680 aaPredicted RBP20.34■□□□□ 0.85
SCARB1-208ENST00000544327 OXER1Q8TDS5 423 aa20.34■□□□□ 0.85
SCARB1-208ENST00000544327 TAF1LQ8IZX4 1826 aa20.34■□□□□ 0.85
SCARB1-208ENST00000544327 SMC2O95347 1197 aa20.34■□□□□ 0.85
SCARB1-208ENST00000544327 OLFM4Q6UX06 510 aa20.34■□□□□ 0.85
SCARB1-208ENST00000544327 TMTC3Q6ZXV5 915 aa20.34■□□□□ 0.85
SCARB1-208ENST00000544327 CCDC82Q8N4S0 544 aa20.34■□□□□ 0.85
SCARB1-208ENST00000544327 C16orf45Q96MC5 204 aaPredicted RBP20.34■□□□□ 0.85
SCARB1-208ENST00000544327 DCP1AQ9NPI6 582 aaPredicted RBP20.34■□□□□ 0.85
SCARB1-208ENST00000544327 PCDHA5Q9Y5H7 936 aa20.34■□□□□ 0.85
SCARB1-208ENST00000544327 TNRC6CQ9HCJ0 1690 aaKnown RBP20.33■□□□□ 0.85
SCARB1-208ENST00000544327 USP17L12C9JPN9 530 aa20.33■□□□□ 0.85
SCARB1-208ENST00000544327 USP17L21D6R901 530 aa20.33■□□□□ 0.85
SCARB1-208ENST00000544327 CBFA2T2O43439 604 aa20.33■□□□□ 0.85
SCARB1-208ENST00000544327 BMP15O95972 392 aa20.33■□□□□ 0.85
SCARB1-208ENST00000544327 KRT2P35908 639 aa20.33■□□□□ 0.85
SCARB1-208ENST00000544327 NYAP1Q6ZVC0 841 aa20.33■□□□□ 0.85
SCARB1-208ENST00000544327 FNBP4Q8N3X1 1017 aaPredicted RBP20.33■□□□□ 0.85
SCARB1-208ENST00000544327 ARPP21Q9UBL0 812 aaPredicted RBP20.33■□□□□ 0.85
SCARB1-208ENST00000544327 TAOK2Q9UL54 1235 aa20.33■□□□□ 0.85
SCARB1-208ENST00000544327 SARSP49591 514 aaKnown RBP20.32■□□□□ 0.84
SCARB1-208ENST00000544327 KANK3Q6NY19 840 aa20.32■□□□□ 0.84
SCARB1-208ENST00000544327 PTF1AQ7RTS3 328 aa20.32■□□□□ 0.84
SCARB1-208ENST00000544327 TRIML1Q8N9V2 468 aa20.32■□□□□ 0.84
SCARB1-208ENST00000544327 GNPATO15228 680 aa20.32■□□□□ 0.84
SCARB1-208ENST00000544327 GRIN1Q05586 938 aa20.32■□□□□ 0.84
SCARB1-208ENST00000544327 POSTNQ15063 836 aa20.32■□□□□ 0.84
SCARB1-208ENST00000544327 SPTY2D1Q68D10 685 aaPredicted RBP20.32■□□□□ 0.84
SCARB1-208ENST00000544327 CCAR2Q8N163 923 aaKnown RBP20.32■□□□□ 0.84
SCARB1-208ENST00000544327 ZNF710Q8N1W2 664 aa20.32■□□□□ 0.84
SCARB1-208ENST00000544327 CABP5Q9NP86 173 aa20.32■□□□□ 0.84
SCARB1-208ENST00000544327 AATFQ9NY61 560 aaKnown RBP eCLIP20.32■□□□□ 0.84
SCARB1-208ENST00000544327 RTCBQ9Y3I0 505 aaKnown RBP20.32■□□□□ 0.84
SCARB1-208ENST00000544327 SBF2Q86WG5 1849 aa20.31■□□□□ 0.84
SCARB1-208ENST00000544327 TRIM75PA6NK02 468 aa20.31■□□□□ 0.84
SCARB1-208ENST00000544327 PLEKHA8P1O95397 391 aa20.31■□□□□ 0.84
SCARB1-208ENST00000544327 SYCP1Q15431 976 aa20.31■□□□□ 0.84
SCARB1-208ENST00000544327 TMC6Q7Z403 805 aa20.31■□□□□ 0.84
SCARB1-208ENST00000544327 CNTNAP5Q8WYK1 1306 aa20.31■□□□□ 0.84
SCARB1-208ENST00000544327 TNFRSF25Q93038 417 aa20.31■□□□□ 0.84
SCARB1-208ENST00000544327 TFCP2L1Q9NZI6 479 aa20.31■□□□□ 0.84
SCARB1-208ENST00000544327 VPS54Q9P1Q0 977 aa20.31■□□□□ 0.84
SCARB1-208ENST00000544327 MAN1B1Q9UKM7 699 aa20.31■□□□□ 0.84
SCARB1-208ENST00000544327 ACTN4O43707 911 aaKnown RBP20.3■□□□□ 0.84
SCARB1-208ENST00000544327 LMOD1P29536 600 aaPredicted RBP20.3■□□□□ 0.84
SCARB1-208ENST00000544327 ISM2Q6H9L7 571 aa20.3■□□□□ 0.84
SCARB1-208ENST00000544327 ARMCX5Q6P1M9 558 aa20.3■□□□□ 0.84
SCARB1-208ENST00000544327 SMIM5Q71RC9 77 aa20.3■□□□□ 0.84
SCARB1-208ENST00000544327 NGLY1Q96IV0 654 aa20.3■□□□□ 0.84
SCARB1-208ENST00000544327 POLR2DO15514 142 aaKnown RBP20.3■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 87.1 ms