RNA–Protein interactions for RNA: ENST00000540805.5

PROM1-220, Transcript of prominin 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PROM1, Length 3,908 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-220ENST00000540805 ARMC3Q5W041 872 aa5.95□□□□□ -1.46
PROM1-220ENST00000540805 DHX32Q7L7V1 743 aaKnown RBP5.95□□□□□ -1.46
PROM1-220ENST00000540805 TRIM22Q8IYM9 498 aa5.95□□□□□ -1.46
PROM1-220ENST00000540805 PDILTQ8N807 584 aa5.95□□□□□ -1.46
PROM1-220ENST00000540805 RABGGTAQ92696 567 aa5.95□□□□□ -1.46
PROM1-220ENST00000540805 KAT2BQ92831 832 aa5.95□□□□□ -1.46
PROM1-220ENST00000540805 PPP2R2CQ9Y2T4 447 aa5.95□□□□□ -1.46
PROM1-220ENST00000540805 SCN7AQ01118 1682 aa5.95□□□□□ -1.46
PROM1-220ENST00000540805 DOCK2Q92608 1830 aa5.95□□□□□ -1.46
PROM1-220ENST00000540805 SPATA31A1Q5TZJ5 1347 aa5.95□□□□□ -1.46
PROM1-220ENST00000540805 COL24A1Q17RW2 1714 aa5.94□□□□□ -1.46
PROM1-220ENST00000540805 YEATS4O95619 227 aa5.94□□□□□ -1.46
PROM1-220ENST00000540805 EPS15P42566 896 aa5.94□□□□□ -1.46
PROM1-220ENST00000540805 HAND2P61296 217 aa5.94□□□□□ -1.46
PROM1-220ENST00000540805 FAM98CQ17RN3 349 aaKnown RBP5.94□□□□□ -1.46
PROM1-220ENST00000540805 ODF2Q5BJF6 829 aa5.94□□□□□ -1.46
PROM1-220ENST00000540805 FBXW10Q5XX13 1052 aa5.94□□□□□ -1.46
PROM1-220ENST00000540805 CCDC129Q6ZRS4 1044 aa5.94□□□□□ -1.46
PROM1-220ENST00000540805 IQUBQ8NA54 791 aa5.94□□□□□ -1.46
PROM1-220ENST00000540805 LINC00301Q8NCQ3 95 aa5.94□□□□□ -1.46
PROM1-220ENST00000540805 EDC3Q96F86 508 aaKnown RBP5.94□□□□□ -1.46
PROM1-220ENST00000540805 SEC62Q99442 399 aaKnown RBP5.94□□□□□ -1.46
PROM1-220ENST00000540805 ISCA1Q9BUE6 129 aa5.94□□□□□ -1.46
PROM1-220ENST00000540805 FUT8Q9BYC5 575 aa5.94□□□□□ -1.46
PROM1-220ENST00000540805 PARD6BQ9BYG5 372 aa5.94□□□□□ -1.46
PROM1-220ENST00000540805 COPRSQ9NQ92 184 aa5.94□□□□□ -1.46
PROM1-220ENST00000540805 MRFAP1Q9Y605 127 aa5.94□□□□□ -1.46
PROM1-220ENST00000540805 CARMIL3Q8ND23 1372 aa5.94□□□□□ -1.46
PROM1-220ENST00000540805 CCDC189A1A4V9 331 aa5.94□□□□□ -1.46
PROM1-220ENST00000540805 FRMD3A2A2Y4 597 aa5.94□□□□□ -1.46
PROM1-220ENST00000540805 SPTLC2O15270 562 aa5.94□□□□□ -1.46
PROM1-220ENST00000540805 CHGBP05060 677 aa5.94□□□□□ -1.46
PROM1-220ENST00000540805 ATP1A3P13637 1013 aa5.94□□□□□ -1.46
PROM1-220ENST00000540805 MAP3K9P80192 1104 aa5.94□□□□□ -1.46
PROM1-220ENST00000540805 LONRF2Q1L5Z9 754 aa5.94□□□□□ -1.46
PROM1-220ENST00000540805 RSRC2Q7L4I2 434 aaKnown RBP5.94□□□□□ -1.46
PROM1-220ENST00000540805 VSTM4Q8IW00 320 aa5.94□□□□□ -1.46
PROM1-220ENST00000540805 HOMEZQ8IX15 550 aa5.94□□□□□ -1.46
PROM1-220ENST00000540805 NIP7Q9Y221 180 aaKnown RBP eCLIP5.94□□□□□ -1.46
PROM1-220ENST00000540805 ZNF609O15014 1411 aa5.94□□□□□ -1.46
PROM1-220ENST00000540805 NHSQ6T4R5 1651 aa5.94□□□□□ -1.46
PROM1-220ENST00000540805 SALL1Q9NSC2 1324 aa5.94□□□□□ -1.46
PROM1-220ENST00000540805 CCDC151A5D8V7 595 aa5.94□□□□□ -1.46
PROM1-220ENST00000540805 ZNF202O95125 648 aa5.94□□□□□ -1.46
PROM1-220ENST00000540805 RXRBP28702 533 aa5.94□□□□□ -1.46
PROM1-220ENST00000540805 MYL5Q02045 173 aa5.94□□□□□ -1.46
PROM1-220ENST00000540805 MCM6Q14566 821 aa5.94□□□□□ -1.46
PROM1-220ENST00000540805 BRD3Q15059 726 aa5.94□□□□□ -1.46
PROM1-220ENST00000540805 MCMDC2Q4G0Z9 681 aa5.94□□□□□ -1.46
PROM1-220ENST00000540805 PPP1R3FQ6ZSY5 799 aaPredicted RBP5.94□□□□□ -1.46
PROM1-220ENST00000540805 SETDB2Q96T68 719 aa5.94□□□□□ -1.46
PROM1-220ENST00000540805 NAPBQ9H115 298 aa5.94□□□□□ -1.46
PROM1-220ENST00000540805 NCOA5Q9HCD5 579 aaKnown RBP5.94□□□□□ -1.46
PROM1-220ENST00000540805 VPS18Q9P253 973 aa5.94□□□□□ -1.46
PROM1-220ENST00000540805 MYH7P12883 1935 aa5.94□□□□□ -1.46
PROM1-220ENST00000540805 NEDD4P46934 1319 aa5.94□□□□□ -1.46
PROM1-220ENST00000540805 RIC1Q4ADV7 1423 aa5.94□□□□□ -1.46
PROM1-220ENST00000540805 ANKRD18BA2A2Z9 1011 aa5.93□□□□□ -1.46
PROM1-220ENST00000540805 TXLNAP40222 546 aa5.93□□□□□ -1.46
PROM1-220ENST00000540805 CCDC96Q2M329 555 aa5.93□□□□□ -1.46
PROM1-220ENST00000540805 STOX1Q6ZVD7 989 aa5.93□□□□□ -1.46
PROM1-220ENST00000540805 DPF2Q92785 391 aa5.93□□□□□ -1.46
PROM1-220ENST00000540805 CLIC4Q9Y696 253 aa5.93□□□□□ -1.46
PROM1-220ENST00000540805 BTAF1O14981 1849 aa5.93□□□□□ -1.46
PROM1-220ENST00000540805 C4AP0C0L4 1744 aa5.93□□□□□ -1.46
PROM1-220ENST00000540805 C4BP0C0L5 1744 aa5.93□□□□□ -1.46
PROM1-220ENST00000540805 SKAP2O75563 359 aaPredicted RBP5.93□□□□□ -1.46
PROM1-220ENST00000540805 EIF3JO75822 258 aaKnown RBP5.93□□□□□ -1.46
PROM1-220ENST00000540805 CYP19A1P11511 503 aaPredicted RBP5.93□□□□□ -1.46
PROM1-220ENST00000540805 SEMA3FQ13275 785 aa5.93□□□□□ -1.46
PROM1-220ENST00000540805 WDR24Q96S15 920 aa5.93□□□□□ -1.46
PROM1-220ENST00000540805 HINFPQ9BQA5 517 aa5.93□□□□□ -1.46
PROM1-220ENST00000540805 POLD4Q9HCU8 107 aa5.93□□□□□ -1.46
PROM1-220ENST00000540805 UTP3Q9NQZ2 479 aaKnown RBP eCLIP5.93□□□□□ -1.46
PROM1-220ENST00000540805 POLR3EQ9NVU0 708 aa5.93□□□□□ -1.46
PROM1-220ENST00000540805 HOOK1Q9UJC3 728 aaKnown RBP5.93□□□□□ -1.46
PROM1-220ENST00000540805 A0A1B0GUL7 405 aa5.93□□□□□ -1.46
PROM1-220ENST00000540805 POTEB2H3BUK9 544 aa5.93□□□□□ -1.46
PROM1-220ENST00000540805 GOLIM4O00461 696 aa5.93□□□□□ -1.46
PROM1-220ENST00000540805 RIMBP2O15034 1052 aa5.93□□□□□ -1.46
PROM1-220ENST00000540805 MYO1BO43795 1136 aa5.93□□□□□ -1.46
PROM1-220ENST00000540805 PFKFB1P16118 471 aa5.93□□□□□ -1.46
PROM1-220ENST00000540805 ATP5JP18859 108 aa5.93□□□□□ -1.46
PROM1-220ENST00000540805 LIG3P49916 1009 aa5.93□□□□□ -1.46
PROM1-220ENST00000540805 BIRC2Q13490 618 aa5.93□□□□□ -1.46
PROM1-220ENST00000540805 OLFM4Q6UX06 510 aa5.93□□□□□ -1.46
PROM1-220ENST00000540805 CCDC12Q8WUD4 166 aaPredicted RBP5.93□□□□□ -1.46
PROM1-220ENST00000540805 C8orf76Q96K31 380 aa5.93□□□□□ -1.46
PROM1-220ENST00000540805 CLIC6Q96NY7 704 aa5.93□□□□□ -1.46
PROM1-220ENST00000540805 BAG1Q99933 345 aaPredicted RBP5.93□□□□□ -1.46
PROM1-220ENST00000540805 DBNLQ9UJU6 430 aaKnown RBP5.93□□□□□ -1.46
PROM1-220ENST00000540805 STX8Q9UNK0 236 aa5.93□□□□□ -1.46
PROM1-220ENST00000540805 UTRNP46939 3433 aa5.93□□□□□ -1.46
PROM1-220ENST00000540805 MAP2K7O14733 419 aa5.93□□□□□ -1.46
PROM1-220ENST00000540805 ERLIN1O75477 346 aa5.93□□□□□ -1.46
PROM1-220ENST00000540805 WDHD1O75717 1129 aaPredicted RBP5.93□□□□□ -1.46
PROM1-220ENST00000540805 MYSM1Q5VVJ2 828 aa5.93□□□□□ -1.46
PROM1-220ENST00000540805 BRAPQ7Z569 592 aa5.93□□□□□ -1.46
PROM1-220ENST00000540805 MICALL1Q8N3F8 863 aa5.93□□□□□ -1.46
PROM1-220ENST00000540805 DHX58Q96C10 678 aa5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms