RNA–Protein interactions for RNA: ENST00000538451.1

LDHA-216, Transcript of lactate dehydrogenase A, humanhuman

TSL 2

Gene LDHA, Length 1,345 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHA-216ENST00000538451 ADARB2Q9NS39 739 aaKnown RBP11.87□□□□□ -0.51
LDHA-216ENST00000538451 SAP30BPQ9UHR5 308 aaKnown RBP11.87□□□□□ -0.51
LDHA-216ENST00000538451 COL2A1P02458 1487 aaPredicted RBP11.87□□□□□ -0.51
LDHA-216ENST00000538451 ROBO3Q96MS0 1386 aa11.87□□□□□ -0.51
LDHA-216ENST00000538451 B4E1Z4 1266 aa11.86□□□□□ -0.51
LDHA-216ENST00000538451 IFIT3O14879 490 aaKnown RBP11.86□□□□□ -0.51
LDHA-216ENST00000538451 DHX16O60231 1041 aaKnown RBP11.86□□□□□ -0.51
LDHA-216ENST00000538451 KDM4AO75164 1064 aa11.86□□□□□ -0.51
LDHA-216ENST00000538451 FGRP09769 529 aa11.86□□□□□ -0.51
LDHA-216ENST00000538451 TSPY3P0CV98 308 aa11.86□□□□□ -0.51
LDHA-216ENST00000538451 TSPY8P0CW00 308 aa11.86□□□□□ -0.51
LDHA-216ENST00000538451 AK2P54819 239 aa11.86□□□□□ -0.51
LDHA-216ENST00000538451 EAPPQ56P03 285 aaPredicted RBP11.86□□□□□ -0.51
LDHA-216ENST00000538451 NFXL1Q6ZNB6 911 aa11.86□□□□□ -0.51
LDHA-216ENST00000538451 Q6ZUG5 572 aa11.86□□□□□ -0.51
LDHA-216ENST00000538451 C16orf86Q6ZW13 317 aa11.86□□□□□ -0.51
LDHA-216ENST00000538451 TBC1D10CQ8IV04 446 aa11.86□□□□□ -0.51
LDHA-216ENST00000538451 CCDC17Q96LX7 622 aa11.86□□□□□ -0.51
LDHA-216ENST00000538451 TBC1D2Q9BYX2 928 aa11.86□□□□□ -0.51
LDHA-216ENST00000538451 HERC5Q9UII4 1024 aaKnown RBP11.86□□□□□ -0.51
LDHA-216ENST00000538451 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.86□□□□□ -0.51
LDHA-216ENST00000538451 LAMA4Q16363 1823 aa11.86□□□□□ -0.51
LDHA-216ENST00000538451 NAV1Q8NEY1 1877 aa11.86□□□□□ -0.51
LDHA-216ENST00000538451 CLRN2A0PK11 232 aa11.86□□□□□ -0.51
LDHA-216ENST00000538451 CCDC69A6NI79 296 aa11.86□□□□□ -0.51
LDHA-216ENST00000538451 TCP10L2B9ZVM9 353 aa11.86□□□□□ -0.51
LDHA-216ENST00000538451 LIFRP42702 1097 aa11.86□□□□□ -0.51
LDHA-216ENST00000538451 EXOSC10Q01780 885 aaKnown RBP11.86□□□□□ -0.51
LDHA-216ENST00000538451 TCP10Q12799 353 aa11.86□□□□□ -0.51
LDHA-216ENST00000538451 WTAPQ15007 396 aa11.86□□□□□ -0.51
LDHA-216ENST00000538451 TMEM67Q5HYA8 995 aa11.86□□□□□ -0.51
LDHA-216ENST00000538451 STOX1Q6ZVD7 989 aa11.86□□□□□ -0.51
LDHA-216ENST00000538451 MB21D2Q8IYB1 491 aaPredicted RBP11.86□□□□□ -0.51
LDHA-216ENST00000538451 TTC14Q96N46 770 aa11.86□□□□□ -0.51
LDHA-216ENST00000538451 ANGEL1Q9UNK9 670 aaKnown RBP11.86□□□□□ -0.51
LDHA-216ENST00000538451 PPP2R3BQ9Y5P8 575 aa11.86□□□□□ -0.51
LDHA-216ENST00000538451 ZNF646O15015 1829 aaPredicted RBP11.85□□□□□ -0.51
LDHA-216ENST00000538451 ATRNL1Q5VV63 1379 aa11.85□□□□□ -0.51
LDHA-216ENST00000538451 PDIA4P13667 645 aaKnown RBP11.85□□□□□ -0.51
LDHA-216ENST00000538451 CDK8P49336 464 aa11.85□□□□□ -0.51
LDHA-216ENST00000538451 PLCD1P51178 756 aa11.85□□□□□ -0.51
LDHA-216ENST00000538451 PPP2R5BQ15173 497 aa11.85□□□□□ -0.51
LDHA-216ENST00000538451 TBC1D10BQ4KMP7 808 aaPredicted RBP11.85□□□□□ -0.51
LDHA-216ENST00000538451 CPLX2Q6PUV4 134 aaKnown RBP11.85□□□□□ -0.51
LDHA-216ENST00000538451 USP50Q70EL3 339 aaPredicted RBP11.85□□□□□ -0.51
LDHA-216ENST00000538451 STK11IPQ8N1F8 1099 aa11.85□□□□□ -0.51
LDHA-216ENST00000538451 BRF1Q92994 677 aa11.85□□□□□ -0.51
LDHA-216ENST00000538451 ZNF274Q96GC6 653 aaPredicted RBP11.85□□□□□ -0.51
LDHA-216ENST00000538451 ZBED3Q96IU2 234 aaPredicted RBP11.85□□□□□ -0.51
LDHA-216ENST00000538451 CSRNP1Q96S65 589 aa11.85□□□□□ -0.51
LDHA-216ENST00000538451 CWC22Q9HCG8 908 aaKnown RBP11.85□□□□□ -0.51
LDHA-216ENST00000538451 DDX4Q9NQI0 724 aaKnown RBP11.85□□□□□ -0.51
LDHA-216ENST00000538451 ZSWIM5Q9P217 1185 aa11.85□□□□□ -0.51
LDHA-216ENST00000538451 FAM198AQ9UFP1 575 aa11.85□□□□□ -0.51
LDHA-216ENST00000538451 NAP1L2Q9ULW6 460 aaPredicted RBP11.85□□□□□ -0.51
LDHA-216ENST00000538451 KIF3AQ9Y496 699 aa11.85□□□□□ -0.51
LDHA-216ENST00000538451 NEDD4P46934 1319 aa11.84□□□□□ -0.51
LDHA-216ENST00000538451 CYP2D7A0A087X1C5 515 aa11.84□□□□□ -0.51
LDHA-216ENST00000538451 CCDC196A0A1B0GTZ2 297 aa11.84□□□□□ -0.51
LDHA-216ENST00000538451 POTEIP0CG38 1075 aa11.84□□□□□ -0.51
LDHA-216ENST00000538451 POTEJP0CG39 1038 aa11.84□□□□□ -0.51
LDHA-216ENST00000538451 CALM1P0DP23 149 aa11.84□□□□□ -0.51
LDHA-216ENST00000538451 CALM2P0DP24 149 aa11.84□□□□□ -0.51
LDHA-216ENST00000538451 CALM3P0DP25 149 aa11.84□□□□□ -0.51
LDHA-216ENST00000538451 CPA1P15085 419 aa11.84□□□□□ -0.51
LDHA-216ENST00000538451 CACNB3P54284 484 aa11.84□□□□□ -0.51
LDHA-216ENST00000538451 TFAP4Q01664 338 aa11.84□□□□□ -0.51
LDHA-216ENST00000538451 NFIAQ12857 509 aa11.84□□□□□ -0.51
LDHA-216ENST00000538451 NBPF9Q3BBW0 867 aa11.84□□□□□ -0.51
LDHA-216ENST00000538451 DCAF15Q66K64 600 aa11.84□□□□□ -0.51
LDHA-216ENST00000538451 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.84□□□□□ -0.51
LDHA-216ENST00000538451 SAMD7Q7Z3H4 446 aa11.84□□□□□ -0.51
LDHA-216ENST00000538451 ZC3H15Q8WU90 426 aaKnown RBP11.84□□□□□ -0.51
LDHA-216ENST00000538451 DCPSQ96C86 337 aaKnown RBP11.84□□□□□ -0.51
LDHA-216ENST00000538451 INTS4Q96HW7 963 aaKnown RBP11.84□□□□□ -0.51
LDHA-216ENST00000538451 TMX3Q96JJ7 454 aa11.84□□□□□ -0.51
LDHA-216ENST00000538451 ZSCAN10Q96SZ4 725 aaPredicted RBP11.84□□□□□ -0.51
LDHA-216ENST00000538451 AGXT2Q9BYV1 514 aa11.84□□□□□ -0.51
LDHA-216ENST00000538451 NBPF3Q9H094 633 aa11.84□□□□□ -0.51
LDHA-216ENST00000538451 SLKQ9H2G2 1235 aaPredicted RBP11.84□□□□□ -0.51
LDHA-216ENST00000538451 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.84□□□□□ -0.518e-8■□□□□ 11.2
LDHA-216ENST00000538451 CABP5Q9NP86 173 aa11.84□□□□□ -0.51
LDHA-216ENST00000538451 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.84□□□□□ -0.51
LDHA-216ENST00000538451 SLC12A7Q9Y666 1083 aa11.84□□□□□ -0.51
LDHA-216ENST00000538451 MYH1P12882 1939 aa11.84□□□□□ -0.51
LDHA-216ENST00000538451 PITPNM2Q9BZ72 1349 aa11.83□□□□□ -0.52
LDHA-216ENST00000538451 LAMB1P07942 1786 aa11.83□□□□□ -0.52
LDHA-216ENST00000538451 FOCADQ5VW36 1801 aa11.83□□□□□ -0.52
LDHA-216ENST00000538451 ECM29Q5VYK3 1845 aa11.83□□□□□ -0.52
LDHA-216ENST00000538451 BAZ2AQ9UIF9 1905 aaKnown RBP11.83□□□□□ -0.52
LDHA-216ENST00000538451 PRDM1O75626 825 aa11.83□□□□□ -0.52
LDHA-216ENST00000538451 CYP2D6P10635 497 aa11.83□□□□□ -0.52
LDHA-216ENST00000538451 EPS15P42566 896 aa11.83□□□□□ -0.52
LDHA-216ENST00000538451 RCAN1P53805 252 aa11.83□□□□□ -0.52
LDHA-216ENST00000538451 SLC4A8Q2Y0W8 1093 aa11.83□□□□□ -0.52
LDHA-216ENST00000538451 SUPT20HL1Q3ZLR7 823 aa11.83□□□□□ -0.52
LDHA-216ENST00000538451 IFIT1BQ5T764 474 aaKnown RBP11.83□□□□□ -0.52
LDHA-216ENST00000538451 NOL8Q76FK4 1167 aaKnown RBP11.83□□□□□ -0.52
LDHA-216ENST00000538451 CATIPQ7Z7H3 387 aa11.83□□□□□ -0.52
LDHA-216ENST00000538451 DGKHQ86XP1 1220 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 131.5 ms