RNA–Protein interactions for RNA: ENST00000531957.1

ATM-217, Transcript of ATM serine/threonine kinase, humanhuman

TSL 4

Gene ATM, Length 537 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-217ENST00000531957 HDXQ7Z353 690 aa6.08□□□□□ -1.44
ATM-217ENST00000531957 ZSCAN18Q8TBC5 510 aaPredicted RBP6.08□□□□□ -1.44
ATM-217ENST00000531957 ZNF507Q8TCN5 953 aa6.08□□□□□ -1.44
ATM-217ENST00000531957 TLR6Q9Y2C9 796 aa6.08□□□□□ -1.44
ATM-217ENST00000531957 IGF2BP3O00425 579 aaKnown RBP eCLIP6.07□□□□□ -1.44
ATM-217ENST00000531957 TSPAN15O95858 294 aa6.07□□□□□ -1.44
ATM-217ENST00000531957 RAP1GAPP47736 663 aa6.07□□□□□ -1.44
ATM-217ENST00000531957 CLCN7P51798 805 aa6.07□□□□□ -1.44
ATM-217ENST00000531957 PSMD2Q13200 908 aa6.07□□□□□ -1.44
ATM-217ENST00000531957 SCARA3Q6AZY7 606 aa6.07□□□□□ -1.44
ATM-217ENST00000531957 XAGE3Q8WTP9 111 aa6.07□□□□□ -1.44
ATM-217ENST00000531957 GNAT3A8MTJ3 354 aa6.06□□□□□ -1.44
ATM-217ENST00000531957 SLITRK5O94991 958 aa6.06□□□□□ -1.44
ATM-217ENST00000531957 CTSHP09668 335 aa6.06□□□□□ -1.44
ATM-217ENST00000531957 TFE3P19532 575 aaPredicted RBP6.06□□□□□ -1.44
ATM-217ENST00000531957 GRK4P32298 578 aa6.06□□□□□ -1.44
ATM-217ENST00000531957 DAB2P98082 770 aa6.06□□□□□ -1.44
ATM-217ENST00000531957 XPCQ01831 940 aaPredicted RBP6.06□□□□□ -1.44
ATM-217ENST00000531957 ZP2Q05996 745 aa6.06□□□□□ -1.44
ATM-217ENST00000531957 SLBPQ14493 270 aaKnown RBP eCLIP6.06□□□□□ -1.44
ATM-217ENST00000531957 MLANAQ16655 118 aa6.06□□□□□ -1.44
ATM-217ENST00000531957 AGMOQ6ZNB7 445 aa6.06□□□□□ -1.44
ATM-217ENST00000531957 SPACA3Q8IXA5 215 aa6.06□□□□□ -1.44
ATM-217ENST00000531957 KCT2Q8NC54 265 aa6.06□□□□□ -1.44
ATM-217ENST00000531957 MIPEPQ99797 713 aa6.06□□□□□ -1.44
ATM-217ENST00000531957 WNT10AQ9GZT5 417 aa6.06□□□□□ -1.44
ATM-217ENST00000531957 PRDM7Q9NQW5 492 aa6.06□□□□□ -1.44
ATM-217ENST00000531957 PRDM5Q9NQX1 630 aaPredicted RBP6.06□□□□□ -1.44
ATM-217ENST00000531957 CNTNAP4Q9C0A0 1308 aa6.05□□□□□ -1.44
ATM-217ENST00000531957 PRR33A8MZF0 331 aa6.05□□□□□ -1.44
ATM-217ENST00000531957 LRIG2O94898 1065 aa6.05□□□□□ -1.44
ATM-217ENST00000531957 AFMP43652 599 aa6.05□□□□□ -1.44
ATM-217ENST00000531957 RPS26P62854 115 aaKnown RBP6.05□□□□□ -1.44
ATM-217ENST00000531957 FGD1P98174 961 aa6.05□□□□□ -1.44
ATM-217ENST00000531957 NKPD1Q17RQ9 610 aa6.05□□□□□ -1.44
ATM-217ENST00000531957 FBXO33Q7Z6M2 555 aa6.05□□□□□ -1.44
ATM-217ENST00000531957 RIN3Q8TB24 985 aa6.05□□□□□ -1.44
ATM-217ENST00000531957 DPH2Q9BQC3 489 aaPredicted RBP6.05□□□□□ -1.44
ATM-217ENST00000531957 KRTAP4-2Q9BYR5 136 aa6.05□□□□□ -1.44
ATM-217ENST00000531957 SNCAIPQ9Y6H5 919 aa6.05□□□□□ -1.44
ATM-217ENST00000531957 GFRA2O00451 464 aa6.04□□□□□ -1.44
ATM-217ENST00000531957 PRAMEF13Q5VWM6 474 aa6.04□□□□□ -1.44
ATM-217ENST00000531957 JARID2Q92833 1246 aaPredicted RBP6.04□□□□□ -1.44
ATM-217ENST00000531957 FOXQ1Q9C009 403 aa6.04□□□□□ -1.44
ATM-217ENST00000531957 GZF1Q9H116 711 aaPredicted RBP6.04□□□□□ -1.44
ATM-217ENST00000531957 MIR1-1HGQ9H1L0 117 aa6.04□□□□□ -1.44
ATM-217ENST00000531957 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.04□□□□□ -1.44
ATM-217ENST00000531957 TPX2Q9ULW0 747 aaKnown RBP6.04□□□□□ -1.44
ATM-217ENST00000531957 CTNND2Q9UQB3 1225 aa6.04□□□□□ -1.44
ATM-217ENST00000531957 ZNF503-AS2A6NEH8 195 aa6.03□□□□□ -1.44
ATM-217ENST00000531957 TAF1CQ15572 869 aaPredicted RBP6.03□□□□□ -1.44
ATM-217ENST00000531957 TMC4Q7Z404 712 aa6.03□□□□□ -1.44
ATM-217ENST00000531957 HID1Q8IV36 788 aa6.03□□□□□ -1.44
ATM-217ENST00000531957 LMCD1Q9NZU5 365 aa6.03□□□□□ -1.44
ATM-217ENST00000531957 PITPNM2Q9BZ72 1349 aa6.02□□□□□ -1.45
ATM-217ENST00000531957 PGRP06401 933 aa6.02□□□□□ -1.45
ATM-217ENST00000531957 GLI1P08151 1106 aa6.02□□□□□ -1.45
ATM-217ENST00000531957 LETMD1Q6P1Q0 360 aa6.02□□□□□ -1.45
ATM-217ENST00000531957 MPZL3Q6UWV2 235 aa6.02□□□□□ -1.45
ATM-217ENST00000531957 ANKLE2Q86XL3 938 aa6.02□□□□□ -1.45
ATM-217ENST00000531957 PHC3Q8NDX5 983 aa6.02□□□□□ -1.45
ATM-217ENST00000531957 CCDC120Q96HB5 630 aa6.02□□□□□ -1.45
ATM-217ENST00000531957 MAPK8IP1Q9UQF2 711 aa6.02□□□□□ -1.45
ATM-217ENST00000531957 CAP2P40123 477 aa6.01□□□□□ -1.45
ATM-217ENST00000531957 ST13P50502 369 aaKnown RBP6.01□□□□□ -1.45
ATM-217ENST00000531957 CCDC27Q2M243 656 aa6.01□□□□□ -1.45
ATM-217ENST00000531957 SFRP5Q5T4F7 317 aa6.01□□□□□ -1.45
ATM-217ENST00000531957 CDKAL1Q5VV42 579 aa6.01□□□□□ -1.45
ATM-217ENST00000531957 BNC2Q6ZN30 1099 aaPredicted RBP6.01□□□□□ -1.45
ATM-217ENST00000531957 CILP2Q8IUL8 1156 aa6.01□□□□□ -1.45
ATM-217ENST00000531957 LRRC56Q8IYG6 542 aaPredicted RBP6.01□□□□□ -1.45
ATM-217ENST00000531957 MFSD2AQ8NA29 543 aa6.01□□□□□ -1.45
ATM-217ENST00000531957 KIRREL1Q96J84 757 aa6.01□□□□□ -1.45
ATM-217ENST00000531957 HSPA12BQ96MM6 686 aa6.01□□□□□ -1.45
ATM-217ENST00000531957 TJP2Q9UDY2 1190 aa6.01□□□□□ -1.45
ATM-217ENST00000531957 VTI1BQ9UEU0 232 aa6.01□□□□□ -1.45
ATM-217ENST00000531957 CORINQ9Y5Q5 1042 aa6.01□□□□□ -1.45
ATM-217ENST00000531957 FAM155AB1AL88 458 aaPredicted RBP6□□□□□ -1.45
ATM-217ENST00000531957 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6□□□□□ -1.45
ATM-217ENST00000531957 SORBS3O60504 671 aa6□□□□□ -1.45
ATM-217ENST00000531957 CBX7O95931 251 aa6□□□□□ -1.45
ATM-217ENST00000531957 CST3P01034 146 aaPredicted RBP6□□□□□ -1.45
ATM-217ENST00000531957 TSNAXIP1Q2TAA8 658 aa6□□□□□ -1.45
ATM-217ENST00000531957 CDH24Q86UP0 819 aa6□□□□□ -1.45
ATM-217ENST00000531957 SIAH1Q8IUQ4 282 aa6□□□□□ -1.45
ATM-217ENST00000531957 MFSD4AQ8N468 514 aa6□□□□□ -1.45
ATM-217ENST00000531957 LIN37Q96GY3 246 aaPredicted RBP6□□□□□ -1.45
ATM-217ENST00000531957 CRELD1Q96HD1 420 aa6□□□□□ -1.45
ATM-217ENST00000531957 NOC4LQ9BVI4 516 aaKnown RBP6□□□□□ -1.45
ATM-217ENST00000531957 ATP13A1Q9HD20 1204 aa6□□□□□ -1.45
ATM-217ENST00000531957 MRS2Q9HD23 443 aa6□□□□□ -1.45
ATM-217ENST00000531957 USP31Q70CQ4 1352 aa6□□□□□ -1.45
ATM-217ENST00000531957 H3BS24 57 aa5.99□□□□□ -1.45
ATM-217ENST00000531957 NFIBO00712 420 aa5.99□□□□□ -1.45
ATM-217ENST00000531957 CFPP27918 469 aa5.99□□□□□ -1.45
ATM-217ENST00000531957 RPL6Q02878 288 aaKnown RBP5.99□□□□□ -1.45
ATM-217ENST00000531957 TMEM67Q5HYA8 995 aa5.99□□□□□ -1.45
ATM-217ENST00000531957 SYDE1Q6ZW31 735 aaPredicted RBP5.99□□□□□ -1.45
ATM-217ENST00000531957 ACSF2Q96CM8 615 aaPredicted RBP5.99□□□□□ -1.45
ATM-217ENST00000531957 TMEM87BQ96K49 555 aa5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms