RNA–Protein interactions for RNA: ENST00000504554.1

RFC1-207, Transcript of replication factor C subunit 1, humanhuman

TSL 4

Gene RFC1, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-207ENST00000504554 SH3RF3Q8TEJ3 882 aaPredicted RBP9.79□□□□□ -0.84
RFC1-207ENST00000504554 OPTNQ96CV9 577 aa9.79□□□□□ -0.84
RFC1-207ENST00000504554 KIF1BPQ96EK5 621 aa9.79□□□□□ -0.84
RFC1-207ENST00000504554 EDC3Q96F86 508 aaKnown RBP9.79□□□□□ -0.84
RFC1-207ENST00000504554 WRNIP1Q96S55 665 aa9.79□□□□□ -0.84
RFC1-207ENST00000504554 PTPN18Q99952 460 aa9.79□□□□□ -0.84
RFC1-207ENST00000504554 SAGE1Q9NXZ1 904 aa9.79□□□□□ -0.84
RFC1-207ENST00000504554 KIAA1468Q9P260 1216 aa9.79□□□□□ -0.84
RFC1-207ENST00000504554 LRP2BPQ9P2M1 347 aa9.79□□□□□ -0.84
RFC1-207ENST00000504554 ZNF112Q9UJU3 913 aa9.79□□□□□ -0.84
RFC1-207ENST00000504554 AKAP11Q9UKA4 1901 aa9.79□□□□□ -0.84
RFC1-207ENST00000504554 OTOFQ9HC10 1997 aa9.79□□□□□ -0.84
RFC1-207ENST00000504554 UNCXA6NJT0 531 aa9.78□□□□□ -0.84
RFC1-207ENST00000504554 PHF20L1A8MW92 1017 aa9.78□□□□□ -0.84
RFC1-207ENST00000504554 CA12O43570 354 aa9.78□□□□□ -0.84
RFC1-207ENST00000504554 RAB11FIP3O75154 756 aa9.78□□□□□ -0.84
RFC1-207ENST00000504554 ENTPD3O75355 529 aa9.78□□□□□ -0.84
RFC1-207ENST00000504554 CHGBP05060 677 aa9.78□□□□□ -0.84
RFC1-207ENST00000504554 ZBTB48P10074 688 aaPredicted RBP9.78□□□□□ -0.84
RFC1-207ENST00000504554 DYNLL1P63167 89 aaKnown RBP9.78□□□□□ -0.84
RFC1-207ENST00000504554 SLFNL1Q499Z3 407 aa9.78□□□□□ -0.84
RFC1-207ENST00000504554 HSP90AB4PQ58FF6 505 aa9.78□□□□□ -0.84
RFC1-207ENST00000504554 ANKK1Q8NFD2 765 aa9.78□□□□□ -0.84
RFC1-207ENST00000504554 DCTPP1Q9H773 170 aa9.78□□□□□ -0.84
RFC1-207ENST00000504554 AATFQ9NY61 560 aaKnown RBP eCLIP9.78□□□□□ -0.84
RFC1-207ENST00000504554 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.78□□□□□ -0.84
RFC1-207ENST00000504554 GRXCR2A6NFK2 248 aa9.77□□□□□ -0.85
RFC1-207ENST00000504554 FAM196BA6NMK8 535 aa9.77□□□□□ -0.85
RFC1-207ENST00000504554 GSTO1P78417 241 aa9.77□□□□□ -0.85
RFC1-207ENST00000504554 MAP3K10Q02779 954 aa9.77□□□□□ -0.85
RFC1-207ENST00000504554 RRP1BQ14684 758 aaKnown RBP9.77□□□□□ -0.85
RFC1-207ENST00000504554 NAA16Q6N069 864 aaPredicted RBP9.77□□□□□ -0.85
RFC1-207ENST00000504554 LAPTM4BQ86VI4 370 aa9.77□□□□□ -0.85
RFC1-207ENST00000504554 SLF2Q8IX21 1173 aa9.77□□□□□ -0.85
RFC1-207ENST00000504554 CLASRPQ8N2M8 674 aaKnown RBP9.77□□□□□ -0.85
RFC1-207ENST00000504554 KRI1Q8N9T8 703 aaKnown RBP9.77□□□□□ -0.85
RFC1-207ENST00000504554 BRI3BPQ8WY22 251 aa9.77□□□□□ -0.85
RFC1-207ENST00000504554 DDX12PQ92771 950 aa9.77□□□□□ -0.85
RFC1-207ENST00000504554 ZNF341Q9BYN7 854 aa9.77□□□□□ -0.85
RFC1-207ENST00000504554 CHMP4BQ9H444 224 aaKnown RBP9.77□□□□□ -0.85
RFC1-207ENST00000504554 MYH2Q9UKX2 1941 aa9.76□□□□□ -0.85
RFC1-207ENST00000504554 MANSC4A6NHS7 340 aaPredicted RBP9.76□□□□□ -0.85
RFC1-207ENST00000504554 SPDYE5A6NIY4 337 aa9.76□□□□□ -0.85
RFC1-207ENST00000504554 IDH1O75874 414 aaKnown RBP9.76□□□□□ -0.85
RFC1-207ENST00000504554 LDHCP07864 332 aa9.76□□□□□ -0.85
RFC1-207ENST00000504554 IFIT2P09913 472 aaKnown RBP9.76□□□□□ -0.85
RFC1-207ENST00000504554 CYP7A1P22680 504 aa9.76□□□□□ -0.85
RFC1-207ENST00000504554 PPP4CP60510 307 aa9.76□□□□□ -0.85
RFC1-207ENST00000504554 CAP1Q01518 475 aa9.76□□□□□ -0.85
RFC1-207ENST00000504554 SREBF2Q12772 1141 aa9.76□□□□□ -0.85
RFC1-207ENST00000504554 TSHZ3Q63HK5 1081 aa9.76□□□□□ -0.85
RFC1-207ENST00000504554 DCAF15Q66K64 600 aa9.76□□□□□ -0.85
RFC1-207ENST00000504554 TEX11Q8IYF3 940 aa9.76□□□□□ -0.85
RFC1-207ENST00000504554 MAGEB6Q8N7X4 407 aa9.76□□□□□ -0.85
RFC1-207ENST00000504554 MIGA1Q8NAN2 632 aa9.76□□□□□ -0.85
RFC1-207ENST00000504554 OSBPL5Q9H0X9 879 aaPredicted RBP9.76□□□□□ -0.85
RFC1-207ENST00000504554 BOLA2Q9H3K6 86 aa9.76□□□□□ -0.85
RFC1-207ENST00000504554 TCRBV5S4A2TA0A5A2 114 aa9.75□□□□□ -0.85
RFC1-207ENST00000504554 GOLIM4O00461 696 aa9.75□□□□□ -0.85
RFC1-207ENST00000504554 IRF6O14896 467 aa9.75□□□□□ -0.85
RFC1-207ENST00000504554 MOGSQ13724 837 aa9.75□□□□□ -0.85
RFC1-207ENST00000504554 NOL9Q5SY16 702 aaKnown RBP9.75□□□□□ -0.85
RFC1-207ENST00000504554 CCDC84Q86UT8 332 aaPredicted RBP9.75□□□□□ -0.85
RFC1-207ENST00000504554 MAPKAPK5Q8IW41 473 aa9.75□□□□□ -0.85
RFC1-207ENST00000504554 ZSCAN29Q8IWY8 852 aaPredicted RBP9.75□□□□□ -0.85
RFC1-207ENST00000504554 FAM43AQ8N2R8 423 aa9.75□□□□□ -0.85
RFC1-207ENST00000504554 OTUD7AQ8TE49 926 aaPredicted RBP9.75□□□□□ -0.85
RFC1-207ENST00000504554 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.75□□□□□ -0.85
RFC1-207ENST00000504554 TGFBRAP1Q8WUH2 860 aa9.75□□□□□ -0.85
RFC1-207ENST00000504554 ZNF296Q8WUU4 475 aaPredicted RBP9.75□□□□□ -0.85
RFC1-207ENST00000504554 ZFRQ96KR1 1074 aaKnown RBP9.75□□□□□ -0.85
RFC1-207ENST00000504554 DNAJC2Q99543 621 aaKnown RBP9.75□□□□□ -0.85
RFC1-207ENST00000504554 CFHR5Q9BXR6 569 aa9.75□□□□□ -0.85
RFC1-207ENST00000504554 LRRCC1Q9C099 1032 aa9.75□□□□□ -0.85
RFC1-207ENST00000504554 MCOLN1Q9GZU1 580 aa9.75□□□□□ -0.85
RFC1-207ENST00000504554 SEPT9Q9UHD8 586 aaPredicted RBP9.75□□□□□ -0.85
RFC1-207ENST00000504554 CSADQ9Y600 493 aa9.75□□□□□ -0.85
RFC1-207ENST00000504554 FLT1P17948 1338 aa9.75□□□□□ -0.85
RFC1-207ENST00000504554 MYO5AQ9Y4I1 1855 aaKnown RBP9.74□□□□□ -0.85
RFC1-207ENST00000504554 CCL15-CCL14A0A0B4J2E2 113 aa9.74□□□□□ -0.85
RFC1-207ENST00000504554 SOWAHBA6NEL2 793 aa9.74□□□□□ -0.85
RFC1-207ENST00000504554 TRIM6-TRIM34B2RNG4 842 aa9.74□□□□□ -0.85
RFC1-207ENST00000504554 GPR25O00155 361 aa9.74□□□□□ -0.85
RFC1-207ENST00000504554 TRIM66O15016 1216 aa9.74□□□□□ -0.85
RFC1-207ENST00000504554 PDE6AP16499 860 aa9.74□□□□□ -0.85
RFC1-207ENST00000504554 ATP5JP18859 108 aa9.74□□□□□ -0.85
RFC1-207ENST00000504554 JAG1P78504 1218 aa9.74□□□□□ -0.85
RFC1-207ENST00000504554 PPIL2Q13356 520 aa9.74□□□□□ -0.85
RFC1-207ENST00000504554 CCL15Q16663 113 aa9.74□□□□□ -0.85
RFC1-207ENST00000504554 SHROOM1Q2M3G4 852 aaPredicted RBP9.74□□□□□ -0.85
RFC1-207ENST00000504554 SLC4A8Q2Y0W8 1093 aa9.74□□□□□ -0.85
RFC1-207ENST00000504554 ERO1BQ86YB8 467 aa9.74□□□□□ -0.85
RFC1-207ENST00000504554 RIOK1Q9BRS2 568 aaKnown RBP9.74□□□□□ -0.85
RFC1-207ENST00000504554 DNAJC18Q9H819 358 aa9.74□□□□□ -0.85
RFC1-207ENST00000504554 MAST2Q6P0Q8 1798 aa9.73□□□□□ -0.85
RFC1-207ENST00000504554 BTBD19C9JJ37 291 aa9.73□□□□□ -0.85
RFC1-207ENST00000504554 RGS20O76081 388 aa9.73□□□□□ -0.85
RFC1-207ENST00000504554 MAP4K4O95819 1239 aaPredicted RBP9.73□□□□□ -0.85
RFC1-207ENST00000504554 INHBEP58166 350 aa9.73□□□□□ -0.85
RFC1-207ENST00000504554 PPATQ06203 517 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms