RNA–Protein interactions for RNA: ENST00000503360.1

HMGB1P35-201, Transcript of high mobility group box 1 pseudogene 35, humanhuman

BASIC

Gene HMGB1P35, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P35-201ENST00000503360 A0A0G2JLL6 359 aaPredicted RBP4.48□□□□□ -1.69
HMGB1P35-201ENST00000503360 SLITRK5O94991 958 aa4.48□□□□□ -1.69
HMGB1P35-201ENST00000503360 NFIXQ14938 502 aa4.48□□□□□ -1.69
HMGB1P35-201ENST00000503360 MAP1SQ66K74 1059 aaPredicted RBP4.48□□□□□ -1.69
HMGB1P35-201ENST00000503360 TTC6Q86TZ1 520 aa4.48□□□□□ -1.69
HMGB1P35-201ENST00000503360 LILRA2Q8N149 483 aa4.48□□□□□ -1.69
HMGB1P35-201ENST00000503360 PIWIL2Q8TC59 973 aaKnown RBP4.48□□□□□ -1.69
HMGB1P35-201ENST00000503360 STK35Q8TDR2 534 aa4.48□□□□□ -1.69
HMGB1P35-201ENST00000503360 ZCCHC4Q9H5U6 513 aa4.48□□□□□ -1.69
HMGB1P35-201ENST00000503360 SAMM50Q9Y512 469 aa4.48□□□□□ -1.69
HMGB1P35-201ENST00000503360 CARNS1A5YM72 827 aa4.47□□□□□ -1.69
HMGB1P35-201ENST00000503360 DLG4P78352 724 aa4.47□□□□□ -1.69
HMGB1P35-201ENST00000503360 ARHGAP4P98171 946 aa4.47□□□□□ -1.69
HMGB1P35-201ENST00000503360 PDE4CQ08493 712 aa4.47□□□□□ -1.69
HMGB1P35-201ENST00000503360 NR0B2Q15466 257 aa4.47□□□□□ -1.69
HMGB1P35-201ENST00000503360 ERICH6BQ5W0A0 696 aa4.47□□□□□ -1.69
HMGB1P35-201ENST00000503360 MARCH10Q8NA82 808 aaPredicted RBP4.47□□□□□ -1.69
HMGB1P35-201ENST00000503360 ACSBG1Q96GR2 724 aa4.47□□□□□ -1.69
HMGB1P35-201ENST00000503360 TRAIPQ9BWF2 469 aa4.47□□□□□ -1.69
HMGB1P35-201ENST00000503360 IRF2BPLQ9H1B7 796 aa4.47□□□□□ -1.69
HMGB1P35-201ENST00000503360 SLC6A17Q9H1V8 727 aa4.47□□□□□ -1.69
HMGB1P35-201ENST00000503360 ABL1P00519 1130 aa4.46□□□□□ -1.7
HMGB1P35-201ENST00000503360 CYP7A1P22680 504 aa4.46□□□□□ -1.7
HMGB1P35-201ENST00000503360 FCGRTP55899 365 aa4.46□□□□□ -1.7
HMGB1P35-201ENST00000503360 LRRC14Q15048 493 aa4.46□□□□□ -1.7
HMGB1P35-201ENST00000503360 ZNF385BQ569K4 471 aa4.46□□□□□ -1.7
HMGB1P35-201ENST00000503360 TCERG1LQ5VWI1 586 aa4.46□□□□□ -1.7
HMGB1P35-201ENST00000503360 UBE3DQ7Z6J8 389 aa4.46□□□□□ -1.7
HMGB1P35-201ENST00000503360 DMRTB1Q96MA1 342 aa4.46□□□□□ -1.7
HMGB1P35-201ENST00000503360 CEP44Q9C0F1 390 aa4.46□□□□□ -1.7
HMGB1P35-201ENST00000503360 CWC22Q9HCG8 908 aaKnown RBP4.46□□□□□ -1.7
HMGB1P35-201ENST00000503360 PPM1HQ9ULR3 514 aa4.46□□□□□ -1.7
HMGB1P35-201ENST00000503360 TPX2Q9ULW0 747 aaKnown RBP4.46□□□□□ -1.7
HMGB1P35-201ENST00000503360 USTQ9Y2C2 406 aa4.46□□□□□ -1.7
HMGB1P35-201ENST00000503360 TEX51A0A1B0GUA7 166 aa4.45□□□□□ -1.7
HMGB1P35-201ENST00000503360 PRR33A8MZF0 331 aa4.45□□□□□ -1.7
HMGB1P35-201ENST00000503360 H3BS24 57 aa4.45□□□□□ -1.7
HMGB1P35-201ENST00000503360 ESR1P03372 595 aa4.45□□□□□ -1.7
HMGB1P35-201ENST00000503360 BMP6P22004 513 aa4.45□□□□□ -1.7
HMGB1P35-201ENST00000503360 ZNF211Q13398 564 aaPredicted RBP4.45□□□□□ -1.7
HMGB1P35-201ENST00000503360 SNX17Q15036 470 aa4.45□□□□□ -1.7
HMGB1P35-201ENST00000503360 CDKAL1Q5VV42 579 aa4.45□□□□□ -1.7
HMGB1P35-201ENST00000503360 PDZD8Q8NEN9 1154 aa4.45□□□□□ -1.7
HMGB1P35-201ENST00000503360 NECAB3Q96P71 396 aaPredicted RBP4.45□□□□□ -1.7
HMGB1P35-201ENST00000503360 SP110Q9HB58 689 aa4.45□□□□□ -1.7
HMGB1P35-201ENST00000503360 PICK1Q9NRD5 415 aa4.45□□□□□ -1.7
HMGB1P35-201ENST00000503360 NLRP2Q9NX02 1062 aa4.45□□□□□ -1.7
HMGB1P35-201ENST00000503360 SLAMF8Q9P0V8 285 aa4.45□□□□□ -1.7
HMGB1P35-201ENST00000503360 DNAJC25-GNG10A0A024R161 153 aa4.44□□□□□ -1.7
HMGB1P35-201ENST00000503360 RFXAPO00287 272 aa4.44□□□□□ -1.7
HMGB1P35-201ENST00000503360 BMP7P18075 431 aa4.44□□□□□ -1.7
HMGB1P35-201ENST00000503360 FGD1P98174 961 aa4.44□□□□□ -1.7
HMGB1P35-201ENST00000503360 TRIM26Q12899 539 aaPredicted RBP4.44□□□□□ -1.7
HMGB1P35-201ENST00000503360 SLBPQ14493 270 aaKnown RBP eCLIP4.44□□□□□ -1.7
HMGB1P35-201ENST00000503360 B4GALNT3Q6L9W6 998 aa4.44□□□□□ -1.7
HMGB1P35-201ENST00000503360 AEBP1Q8IUX7 1158 aa4.44□□□□□ -1.7
HMGB1P35-201ENST00000503360 OXR1Q8N573 874 aa4.44□□□□□ -1.7
HMGB1P35-201ENST00000503360 UBE2FQ969M7 185 aa4.44□□□□□ -1.7
HMGB1P35-201ENST00000503360 MCOLN1Q9GZU1 580 aa4.44□□□□□ -1.7
HMGB1P35-201ENST00000503360 ZNF552Q9H707 407 aaPredicted RBP4.44□□□□□ -1.7
HMGB1P35-201ENST00000503360 CYP8B1Q9UNU6 501 aa4.44□□□□□ -1.7
HMGB1P35-201ENST00000503360 TACC3Q9Y6A5 838 aa4.44□□□□□ -1.7
HMGB1P35-201ENST00000503360 HRKO00198 91 aa4.43□□□□□ -1.7
HMGB1P35-201ENST00000503360 GPR182O15218 404 aa4.43□□□□□ -1.7
HMGB1P35-201ENST00000503360 ADRB1P08588 477 aa4.43□□□□□ -1.7
HMGB1P35-201ENST00000503360 KRTAP10-2P60368 255 aa4.43□□□□□ -1.7
HMGB1P35-201ENST00000503360 RALGPS1Q5JS13 557 aa4.43□□□□□ -1.7
HMGB1P35-201ENST00000503360 LETMD1Q6P1Q0 360 aa4.43□□□□□ -1.7
HMGB1P35-201ENST00000503360 C12orf40Q86WS4 652 aa4.43□□□□□ -1.7
HMGB1P35-201ENST00000503360 GLYCTKQ8IVS8 523 aa4.43□□□□□ -1.7
HMGB1P35-201ENST00000503360 C3orf58Q8NDZ4 430 aa4.43□□□□□ -1.7
HMGB1P35-201ENST00000503360 EPS8L3Q8TE67 593 aaKnown RBP4.43□□□□□ -1.7
HMGB1P35-201ENST00000503360 RBCK1Q9BYM8 510 aa4.43□□□□□ -1.7
HMGB1P35-201ENST00000503360 BCO2Q9BYV7 579 aa4.43□□□□□ -1.7
HMGB1P35-201ENST00000503360 SRCIN1Q9C0H9 1055 aa4.43□□□□□ -1.7
HMGB1P35-201ENST00000503360 KCNK12Q9HB15 430 aa4.43□□□□□ -1.7
HMGB1P35-201ENST00000503360 CNOT6Q9ULM6 557 aaKnown RBP4.43□□□□□ -1.7
HMGB1P35-201ENST00000503360 FITM1A5D6W6 292 aa4.42□□□□□ -1.7
HMGB1P35-201ENST00000503360 DCDC2CA8MYV0 355 aa4.42□□□□□ -1.7
HMGB1P35-201ENST00000503360 SASH1O94885 1247 aa4.42□□□□□ -1.7
HMGB1P35-201ENST00000503360 CST3P01034 146 aaPredicted RBP4.42□□□□□ -1.7
HMGB1P35-201ENST00000503360 NFKB2Q00653 900 aa4.42□□□□□ -1.7
HMGB1P35-201ENST00000503360 GAB4Q2WGN9 574 aa4.42□□□□□ -1.7
HMGB1P35-201ENST00000503360 LLGL2Q6P1M3 1020 aa4.42□□□□□ -1.7
HMGB1P35-201ENST00000503360 HID1Q8IV36 788 aa4.42□□□□□ -1.7
HMGB1P35-201ENST00000503360 KRTAP9-8Q9BYQ0 159 aa4.42□□□□□ -1.7
HMGB1P35-201ENST00000503360 WNT10AQ9GZT5 417 aa4.42□□□□□ -1.7
HMGB1P35-201ENST00000503360 NIF3L1Q9GZT8 377 aa4.42□□□□□ -1.7
HMGB1P35-201ENST00000503360 RNF32Q9H0A6 362 aa4.42□□□□□ -1.7
HMGB1P35-201ENST00000503360 XYLT2Q9H1B5 865 aa4.42□□□□□ -1.7
HMGB1P35-201ENST00000503360 CBX8Q9HC52 389 aa4.42□□□□□ -1.7
HMGB1P35-201ENST00000503360 ANO2Q9NQ90 1003 aa4.42□□□□□ -1.7
HMGB1P35-201ENST00000503360 YBX2Q9Y2T7 364 aaKnown RBP4.42□□□□□ -1.7
HMGB1P35-201ENST00000503360 CNTNAP4Q9C0A0 1308 aa4.42□□□□□ -1.7
HMGB1P35-201ENST00000503360 MYOCOSA0A1B0GUC4 107 aa4.41□□□□□ -1.7
HMGB1P35-201ENST00000503360 ZBTB7CA1YPR0 619 aa4.41□□□□□ -1.7
HMGB1P35-201ENST00000503360 ENC1O14682 589 aa4.41□□□□□ -1.7
HMGB1P35-201ENST00000503360 TRIM13O60858 407 aa4.41□□□□□ -1.7
HMGB1P35-201ENST00000503360 BRD1O95696 1058 aa4.41□□□□□ -1.7
HMGB1P35-201ENST00000503360 TNK2Q07912 1038 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms