RNA–Protein interactions for RNA: ENST00000493039.5

CSTF1-206, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 5

Gene CSTF1, Length 2,234 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-206ENST00000493039 RNF20Q5VTR2 975 aa11.1□□□□□ -0.63
CSTF1-206ENST00000493039 TATDN1Q6P1N9 297 aa11.1□□□□□ -0.63
CSTF1-206ENST00000493039 PPP2R3BQ9Y5P8 575 aa11.1□□□□□ -0.63
CSTF1-206ENST00000493039 ORC4O43929 436 aa11.09□□□□□ -0.63
CSTF1-206ENST00000493039 TBC1D12O60347 775 aa11.09□□□□□ -0.63
CSTF1-206ENST00000493039 HLA-DOAP06340 250 aa11.09□□□□□ -0.63
CSTF1-206ENST00000493039 ZKSCAN1P17029 563 aaPredicted RBP11.09□□□□□ -0.63
CSTF1-206ENST00000493039 RASA1P20936 1047 aa11.09□□□□□ -0.63
CSTF1-206ENST00000493039 MFSD6Q6ZSS7 791 aa11.09□□□□□ -0.63
CSTF1-206ENST00000493039 MB21D2Q8IYB1 491 aaPredicted RBP11.09□□□□□ -0.63
CSTF1-206ENST00000493039 CDCA5Q96FF9 252 aa11.09□□□□□ -0.63
CSTF1-206ENST00000493039 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.09□□□□□ -0.63
CSTF1-206ENST00000493039 ZSWIM5Q9P217 1185 aa11.09□□□□□ -0.63
CSTF1-206ENST00000493039 B4E1Z4 1266 aa11.09□□□□□ -0.63
CSTF1-206ENST00000493039 ANTXR2P58335 489 aa11.09□□□□□ -0.63
CSTF1-206ENST00000493039 CYB5R4Q7L1T6 521 aa11.09□□□□□ -0.63
CSTF1-206ENST00000493039 UPF2Q9HAU5 1272 aaKnown RBP11.09□□□□□ -0.63
CSTF1-206ENST00000493039 PRDM16Q9HAZ2 1276 aa11.09□□□□□ -0.63
CSTF1-206ENST00000493039 MCCP23508 829 aa11.08□□□□□ -0.64
CSTF1-206ENST00000493039 EXOSC10Q01780 885 aaKnown RBP11.08□□□□□ -0.64
CSTF1-206ENST00000493039 FAM47AQ5JRC9 791 aa11.08□□□□□ -0.64
CSTF1-206ENST00000493039 AMOTL1Q8IY63 956 aa11.08□□□□□ -0.64
CSTF1-206ENST00000493039 JAKMIP1Q96N16 626 aaKnown RBP11.08□□□□□ -0.64
CSTF1-206ENST00000493039 NEK1Q96PY6 1258 aa11.08□□□□□ -0.64
CSTF1-206ENST00000493039 UPF3BQ9BZI7 483 aaKnown RBP11.08□□□□□ -0.64
CSTF1-206ENST00000493039 ZSWIM6Q9HCJ5 1215 aa11.08□□□□□ -0.64
CSTF1-206ENST00000493039 HERC5Q9UII4 1024 aaKnown RBP11.08□□□□□ -0.64
CSTF1-206ENST00000493039 KDM4AO75164 1064 aa11.08□□□□□ -0.64
CSTF1-206ENST00000493039 USP2O75604 605 aaPredicted RBP11.08□□□□□ -0.64
CSTF1-206ENST00000493039 CHADLQ6NUI6 762 aa11.08□□□□□ -0.64
CSTF1-206ENST00000493039 CHST3Q7LGC8 479 aa11.08□□□□□ -0.64
CSTF1-206ENST00000493039 TCEANC2Q96MN5 208 aa11.08□□□□□ -0.64
CSTF1-206ENST00000493039 TM6SF1Q9BZW5 370 aa11.08□□□□□ -0.64
CSTF1-206ENST00000493039 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.08□□□□□ -0.64
CSTF1-206ENST00000493039 ZNF112Q9UJU3 913 aa11.08□□□□□ -0.64
CSTF1-206ENST00000493039 NMT2O60551 498 aa11.07□□□□□ -0.64
CSTF1-206ENST00000493039 AKR1B1P15121 316 aa11.07□□□□□ -0.64
CSTF1-206ENST00000493039 GUCY1A2P33402 732 aa11.07□□□□□ -0.64
CSTF1-206ENST00000493039 PDE4BQ07343 736 aa11.07□□□□□ -0.64
CSTF1-206ENST00000493039 RRP12Q5JTH9 1297 aaKnown RBP11.07□□□□□ -0.64
CSTF1-206ENST00000493039 MOB2Q70IA6 237 aa11.07□□□□□ -0.64
CSTF1-206ENST00000493039 CRACR2BQ8N4Y2 399 aaPredicted RBP11.07□□□□□ -0.64
CSTF1-206ENST00000493039 RNF41Q9H4P4 317 aaPredicted RBP11.07□□□□□ -0.64
CSTF1-206ENST00000493039 MKNK2Q9HBH9 465 aa11.07□□□□□ -0.64
CSTF1-206ENST00000493039 GPHNQ9NQX3 736 aaPredicted RBP11.07□□□□□ -0.64
CSTF1-206ENST00000493039 IL17RBQ9NRM6 502 aa11.07□□□□□ -0.64
CSTF1-206ENST00000493039 SWAP70Q9UH65 585 aa11.07□□□□□ -0.64
CSTF1-206ENST00000493039 LAMA4Q16363 1823 aa11.07□□□□□ -0.64
CSTF1-206ENST00000493039 SLC3A2P08195 630 aaKnown RBP11.07□□□□□ -0.64
CSTF1-206ENST00000493039 PCP11498 1178 aaKnown RBP11.07□□□□□ -0.64
CSTF1-206ENST00000493039 CASTP20810 708 aaKnown RBP11.07□□□□□ -0.64
CSTF1-206ENST00000493039 INPP5BP32019 993 aa11.07□□□□□ -0.64
CSTF1-206ENST00000493039 TFAP4Q01664 338 aa11.07□□□□□ -0.64
CSTF1-206ENST00000493039 PRKG1Q13976 671 aa11.07□□□□□ -0.64
CSTF1-206ENST00000493039 KRT32Q14532 448 aa11.07□□□□□ -0.64
CSTF1-206ENST00000493039 SUPT20HL1Q3ZLR7 823 aa11.07□□□□□ -0.64
CSTF1-206ENST00000493039 CST9Q5W186 159 aa11.07□□□□□ -0.64
CSTF1-206ENST00000493039 NCOA7Q8NI08 942 aa11.07□□□□□ -0.64
CSTF1-206ENST00000493039 KLRG1Q96E93 195 aa11.07□□□□□ -0.64
CSTF1-206ENST00000493039 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.07□□□□□ -0.64
CSTF1-206ENST00000493039 LAMB1P07942 1786 aa11.06□□□□□ -0.64
CSTF1-206ENST00000493039 RANBP6O60518 1105 aaKnown RBP11.06□□□□□ -0.64
CSTF1-206ENST00000493039 GDF11O95390 407 aa11.06□□□□□ -0.64
CSTF1-206ENST00000493039 FAM43BQ6ZT52 329 aaPredicted RBP11.06□□□□□ -0.64
CSTF1-206ENST00000493039 RUFY3Q7L099 469 aa11.06□□□□□ -0.64
CSTF1-206ENST00000493039 SIAH1Q8IUQ4 282 aa11.06□□□□□ -0.64
CSTF1-206ENST00000493039 TTC14Q96N46 770 aa11.06□□□□□ -0.64
CSTF1-206ENST00000493039 LRRC2Q9BYS8 371 aa11.06□□□□□ -0.64
CSTF1-206ENST00000493039 KRT23Q9C075 422 aa11.06□□□□□ -0.64
CSTF1-206ENST00000493039 CNNM2Q9H8M5 875 aa11.06□□□□□ -0.64
CSTF1-206ENST00000493039 SENP2Q9HC62 589 aa11.06□□□□□ -0.64
CSTF1-206ENST00000493039 TOMM22Q9NS69 142 aa11.06□□□□□ -0.64
CSTF1-206ENST00000493039 IGKV6D-41A0A0C4DH26 115 aa11.05□□□□□ -0.64
CSTF1-206ENST00000493039 CD2BP2O95400 341 aaKnown RBP11.05□□□□□ -0.64
CSTF1-206ENST00000493039 RPS6KB1P23443 525 aa11.05□□□□□ -0.64
CSTF1-206ENST00000493039 CAP2P40123 477 aa11.05□□□□□ -0.64
CSTF1-206ENST00000493039 CERKLQ49MI3 558 aaPredicted RBP11.05□□□□□ -0.64
CSTF1-206ENST00000493039 RCSD1Q6JBY9 416 aa11.05□□□□□ -0.64
CSTF1-206ENST00000493039 DHX32Q7L7V1 743 aaKnown RBP11.05□□□□□ -0.64
CSTF1-206ENST00000493039 CLEC10AQ8IUN9 316 aa11.05□□□□□ -0.64
CSTF1-206ENST00000493039 NEDD1Q8NHV4 660 aa11.05□□□□□ -0.64
CSTF1-206ENST00000493039 IGDCC4Q8TDY8 1250 aa11.05□□□□□ -0.64
CSTF1-206ENST00000493039 ZKSCAN4Q969J2 545 aaPredicted RBP11.05□□□□□ -0.64
CSTF1-206ENST00000493039 ZKSCAN3Q9BRR0 538 aa11.05□□□□□ -0.64
CSTF1-206ENST00000493039 CWC22Q9HCG8 908 aaKnown RBP11.05□□□□□ -0.64
CSTF1-206ENST00000493039 NOVP48745 357 aa11.05□□□□□ -0.64
CSTF1-206ENST00000493039 TRDNQ13061 729 aa11.05□□□□□ -0.64
CSTF1-206ENST00000493039 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.05□□□□□ -0.64
CSTF1-206ENST00000493039 ZNF444Q8N0Y2 327 aaPredicted RBP11.05□□□□□ -0.64
CSTF1-206ENST00000493039 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.05□□□□□ -0.642e-10■■■■■ 63.8
CSTF1-206ENST00000493039 ESR2Q92731 530 aa11.05□□□□□ -0.64
CSTF1-206ENST00000493039 PASKQ96RG2 1323 aa11.04□□□□□ -0.64
CSTF1-206ENST00000493039 PRC1O43663 620 aa11.04□□□□□ -0.64
CSTF1-206ENST00000493039 TOMM70O94826 608 aa11.04□□□□□ -0.64
CSTF1-206ENST00000493039 GH2P01242 217 aa11.04□□□□□ -0.64
CSTF1-206ENST00000493039 PSMA5P28066 241 aa11.04□□□□□ -0.64
CSTF1-206ENST00000493039 NEK4P51957 841 aa11.04□□□□□ -0.64
CSTF1-206ENST00000493039 SEC23AQ15436 765 aa11.04□□□□□ -0.64
CSTF1-206ENST00000493039 MAP3K11Q16584 847 aa11.04□□□□□ -0.64
CSTF1-206ENST00000493039 BLOC1S2Q6QNY1 142 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 251 ms