RNA–Protein interactions for RNA: ENST00000489357.5

VTI1A-207, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 3

Gene VTI1A, Length 444 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-207ENST00000489357 CNNM2Q9H8M5 875 aa9.91□□□□□ -0.82
VTI1A-207ENST00000489357 RNF181Q9P0P0 153 aa9.91□□□□□ -0.82
VTI1A-207ENST00000489357 MINPP1Q9UNW1 487 aa9.91□□□□□ -0.82
VTI1A-207ENST00000489357 NDUFB9Q9Y6M9 179 aa9.91□□□□□ -0.82
VTI1A-207ENST00000489357 ZNF804BA4D1E1 1349 aa9.9□□□□□ -0.82
VTI1A-207ENST00000489357 FGAP02671 866 aa9.9□□□□□ -0.82
VTI1A-207ENST00000489357 RCAN1P53805 252 aa9.9□□□□□ -0.82
VTI1A-207ENST00000489357 UBE4AQ14139 1066 aa9.9□□□□□ -0.82
VTI1A-207ENST00000489357 ANKRD18AQ8IVF6 992 aa9.9□□□□□ -0.82
VTI1A-207ENST00000489357 PDLIM2Q96JY6 352 aa9.9□□□□□ -0.82
VTI1A-207ENST00000489357 TMEM87BQ96K49 555 aa9.9□□□□□ -0.82
VTI1A-207ENST00000489357 GPBP1L1Q9HC44 474 aaPredicted RBP9.9□□□□□ -0.82
VTI1A-207ENST00000489357 GPCPD1Q9NPB8 672 aa9.9□□□□□ -0.82
VTI1A-207ENST00000489357 GNL3LQ9NVN8 582 aaKnown RBP9.9□□□□□ -0.82
VTI1A-207ENST00000489357 POLLQ9UGP5 575 aa9.9□□□□□ -0.82
VTI1A-207ENST00000489357 CNPY2Q9Y2B0 182 aa9.9□□□□□ -0.82
VTI1A-207ENST00000489357 TAF6LQ9Y6J9 622 aa9.9□□□□□ -0.82
VTI1A-207ENST00000489357 TCHHQ07283 1943 aa9.9□□□□□ -0.83
VTI1A-207ENST00000489357 MYH15Q9Y2K3 1946 aa9.9□□□□□ -0.83
VTI1A-207ENST00000489357 PSME4Q14997 1843 aa9.89□□□□□ -0.83
VTI1A-207ENST00000489357 IRS2Q9Y4H2 1338 aa9.89□□□□□ -0.83
VTI1A-207ENST00000489357 SCN9AQ15858 1988 aa9.89□□□□□ -0.83
VTI1A-207ENST00000489357 TCRBV5S4A2TA0A5A2 114 aa9.89□□□□□ -0.83
VTI1A-207ENST00000489357 SYCE3A1L190 88 aa9.89□□□□□ -0.83
VTI1A-207ENST00000489357 H3BQV1 296 aa9.89□□□□□ -0.83
VTI1A-207ENST00000489357 FZD9O00144 591 aa9.89□□□□□ -0.83
VTI1A-207ENST00000489357 FOXP2O15409 715 aa9.89□□□□□ -0.83
VTI1A-207ENST00000489357 CDKL5O76039 1030 aa9.89□□□□□ -0.83
VTI1A-207ENST00000489357 CAVIN2O95810 425 aa9.89□□□□□ -0.83
VTI1A-207ENST00000489357 PCP11498 1178 aaKnown RBP9.89□□□□□ -0.83
VTI1A-207ENST00000489357 PDE6AP16499 860 aa9.89□□□□□ -0.83
VTI1A-207ENST00000489357 PDIA3P30101 505 aaKnown RBP9.89□□□□□ -0.83
VTI1A-207ENST00000489357 IARSP41252 1262 aaKnown RBP9.89□□□□□ -0.83
VTI1A-207ENST00000489357 GPSM2P81274 684 aa9.89□□□□□ -0.83
VTI1A-207ENST00000489357 SCRN1Q12765 414 aa9.89□□□□□ -0.83
VTI1A-207ENST00000489357 SWT1Q5T5J6 900 aaKnown RBP9.89□□□□□ -0.83
VTI1A-207ENST00000489357 IFFO2Q5TF58 517 aa9.89□□□□□ -0.83
VTI1A-207ENST00000489357 FOXD4L5Q5VV16 416 aaPredicted RBP9.89□□□□□ -0.83
VTI1A-207ENST00000489357 PARP9Q8IXQ6 854 aa9.89□□□□□ -0.83
VTI1A-207ENST00000489357 MB21D2Q8IYB1 491 aaPredicted RBP9.89□□□□□ -0.83
VTI1A-207ENST00000489357 MPNDQ8N594 471 aa9.89□□□□□ -0.83
VTI1A-207ENST00000489357 NSUN7Q8NE18 718 aaKnown RBP9.89□□□□□ -0.83
VTI1A-207ENST00000489357 FOXD4L4Q8WXT5 416 aaPredicted RBP9.89□□□□□ -0.83
VTI1A-207ENST00000489357 CCDC85AQ96PX6 553 aaPredicted RBP9.89□□□□□ -0.83
VTI1A-207ENST00000489357 TMUB1Q9BVT8 246 aa9.89□□□□□ -0.83
VTI1A-207ENST00000489357 PANK2Q9BZ23 570 aa9.89□□□□□ -0.83
VTI1A-207ENST00000489357 NACAP1Q9BZK3 213 aa9.89□□□□□ -0.83
VTI1A-207ENST00000489357 NID2Q14112 1375 aa9.88□□□□□ -0.83
VTI1A-207ENST00000489357 PATL2C9JE40 543 aaKnown RBP9.88□□□□□ -0.83
VTI1A-207ENST00000489357 PHKA1P46020 1223 aa9.88□□□□□ -0.83
VTI1A-207ENST00000489357 DNM1Q05193 864 aaKnown RBP9.88□□□□□ -0.83
VTI1A-207ENST00000489357 KIAA2012Q0VF49 1180 aa9.88□□□□□ -0.83
VTI1A-207ENST00000489357 CPLX2Q6PUV4 134 aaKnown RBP9.88□□□□□ -0.83
VTI1A-207ENST00000489357 C15orf52Q6ZUT6 534 aaKnown RBP9.88□□□□□ -0.83
VTI1A-207ENST00000489357 CDC37L1Q7L3B6 337 aa9.88□□□□□ -0.83
VTI1A-207ENST00000489357 SAMD7Q7Z3H4 446 aa9.88□□□□□ -0.83
VTI1A-207ENST00000489357 TBC1D16Q8TBP0 767 aa9.88□□□□□ -0.83
VTI1A-207ENST00000489357 AIDAQ96BJ3 306 aa9.88□□□□□ -0.83
VTI1A-207ENST00000489357 ZNF396Q96N95 335 aaPredicted RBP9.88□□□□□ -0.83
VTI1A-207ENST00000489357 STRBPQ96SI9 672 aaKnown RBP9.88□□□□□ -0.83
VTI1A-207ENST00000489357 PUS7LQ9H0K6 701 aaKnown RBP9.88□□□□□ -0.83
VTI1A-207ENST00000489357 ZNF277Q9NRM2 450 aaPredicted RBP9.88□□□□□ -0.83
VTI1A-207ENST00000489357 DDX19AQ9NUU7 478 aaKnown RBP9.88□□□□□ -0.83
VTI1A-207ENST00000489357 ZNF646O15015 1829 aaPredicted RBP9.88□□□□□ -0.83
VTI1A-207ENST00000489357 ZNF532Q9HCE3 1301 aa9.87□□□□□ -0.83
VTI1A-207ENST00000489357 PTPDC1A2A3K4 754 aa9.87□□□□□ -0.83
VTI1A-207ENST00000489357 GOLGA6L4A6NEF3 574 aa9.87□□□□□ -0.83
VTI1A-207ENST00000489357 WTIPA6NIX2 430 aaPredicted RBP9.87□□□□□ -0.83
VTI1A-207ENST00000489357 FIBPO43427 364 aa9.87□□□□□ -0.83
VTI1A-207ENST00000489357 PRC1O43663 620 aa9.87□□□□□ -0.83
VTI1A-207ENST00000489357 IDH1O75874 414 aaKnown RBP9.87□□□□□ -0.83
VTI1A-207ENST00000489357 LIFRP42702 1097 aa9.87□□□□□ -0.83
VTI1A-207ENST00000489357 C1QTNF8P60827 252 aa9.87□□□□□ -0.83
VTI1A-207ENST00000489357 RESTQ13127 1097 aa9.87□□□□□ -0.83
VTI1A-207ENST00000489357 RASGRF1Q13972 1273 aa9.87□□□□□ -0.83
VTI1A-207ENST00000489357 PPP2R5BQ15173 497 aa9.87□□□□□ -0.83
VTI1A-207ENST00000489357 CAVIN4Q5BKX8 364 aa9.87□□□□□ -0.83
VTI1A-207ENST00000489357 GIMAP6Q6P9H5 292 aa9.87□□□□□ -0.83
VTI1A-207ENST00000489357 DPP8Q6V1X1 898 aaPredicted RBP9.87□□□□□ -0.83
VTI1A-207ENST00000489357 BRAPQ7Z569 592 aa9.87□□□□□ -0.83
VTI1A-207ENST00000489357 SGMS1Q86VZ5 419 aa9.87□□□□□ -0.83
VTI1A-207ENST00000489357 TMTC2Q8N394 836 aa9.87□□□□□ -0.83
VTI1A-207ENST00000489357 SUPT20HQ8NEM7 779 aa9.87□□□□□ -0.83
VTI1A-207ENST00000489357 ANKK1Q8NFD2 765 aa9.87□□□□□ -0.83
VTI1A-207ENST00000489357 WNT2BQ93097 391 aa9.87□□□□□ -0.83
VTI1A-207ENST00000489357 SPATA32Q96LK8 384 aa9.87□□□□□ -0.83
VTI1A-207ENST00000489357 TCEANC2Q96MN5 208 aa9.87□□□□□ -0.83
VTI1A-207ENST00000489357 REPIN1Q9BWE0 567 aaKnown RBP9.87□□□□□ -0.83
VTI1A-207ENST00000489357 KRT23Q9C075 422 aa9.87□□□□□ -0.83
VTI1A-207ENST00000489357 ANKRD2Q9GZV1 360 aa9.87□□□□□ -0.83
VTI1A-207ENST00000489357 RBSNQ9H1K0 784 aa9.87□□□□□ -0.83
VTI1A-207ENST00000489357 RNF41Q9H4P4 317 aaPredicted RBP9.87□□□□□ -0.83
VTI1A-207ENST00000489357 PIH1D3Q9NQM4 214 aaKnown RBP9.87□□□□□ -0.83
VTI1A-207ENST00000489357 ANGEL1Q9UNK9 670 aaKnown RBP9.87□□□□□ -0.83
VTI1A-207ENST00000489357 NSFL1CQ9UNZ2 370 aaKnown RBP9.87□□□□□ -0.83
VTI1A-207ENST00000489357 WDR90Q96KV7 1748 aa9.87□□□□□ -0.83
VTI1A-207ENST00000489357 XDHP47989 1333 aa9.86□□□□□ -0.83
VTI1A-207ENST00000489357 MAST2Q6P0Q8 1798 aa9.86□□□□□ -0.83
VTI1A-207ENST00000489357 GLTPD2A6NH11 291 aa9.86□□□□□ -0.83
VTI1A-207ENST00000489357 POTECB2RU33 542 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 160.5 ms