RNA–Protein interactions for RNA: ENST00000487172.1

PCOLCE-208, Transcript of procollagen C-endopeptidase enhancer, humanhuman

TSL 2

Gene PCOLCE, Length 686 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE-208ENST00000487172 DDX52Q9Y2R4 599 aaKnown RBP eCLIP23.01■■□□□ 1.27
PCOLCE-208ENST00000487172 SPDYE5A6NIY4 337 aa23■■□□□ 1.27
PCOLCE-208ENST00000487172 RASA1P20936 1047 aa23■■□□□ 1.27
PCOLCE-208ENST00000487172 NT5C2P49902 561 aa23■■□□□ 1.27
PCOLCE-208ENST00000487172 HAND2P61296 217 aa23■■□□□ 1.27
PCOLCE-208ENST00000487172 HTRA3P83110 453 aa23■■□□□ 1.27
PCOLCE-208ENST00000487172 NECTIN1Q15223 517 aa23■■□□□ 1.27
PCOLCE-208ENST00000487172 ABCB5Q2M3G0 1257 aa23■■□□□ 1.27
PCOLCE-208ENST00000487172 AKNAD1Q5T1N1 836 aa23■■□□□ 1.27
PCOLCE-208ENST00000487172 RASAL3Q86YV0 1011 aa23■■□□□ 1.27
PCOLCE-208ENST00000487172 STAG1Q8WVM7 1258 aa23■■□□□ 1.27
PCOLCE-208ENST00000487172 RNF41Q9H4P4 317 aaPredicted RBP23■■□□□ 1.27
PCOLCE-208ENST00000487172 CABP5Q9NP86 173 aa23■■□□□ 1.27
PCOLCE-208ENST00000487172 PICK1Q9NRD5 415 aa23■■□□□ 1.27
PCOLCE-208ENST00000487172 ATAD5Q96QE3 1844 aa23■■□□□ 1.27
PCOLCE-208ENST00000487172 ORC4O43929 436 aa22.99■■□□□ 1.27
PCOLCE-208ENST00000487172 GDF11O95390 407 aa22.99■■□□□ 1.27
PCOLCE-208ENST00000487172 SLC10A3P09131 477 aa22.99■■□□□ 1.27
PCOLCE-208ENST00000487172 PTPRAP18433 802 aa22.99■■□□□ 1.27
PCOLCE-208ENST00000487172 ECE1P42892 770 aa22.99■■□□□ 1.27
PCOLCE-208ENST00000487172 JAG1P78504 1218 aa22.99■■□□□ 1.27
PCOLCE-208ENST00000487172 PPATQ06203 517 aa22.99■■□□□ 1.27
PCOLCE-208ENST00000487172 ZNF444Q8N0Y2 327 aaPredicted RBP22.99■■□□□ 1.27
PCOLCE-208ENST00000487172 STK11IPQ8N1F8 1099 aa22.99■■□□□ 1.27
PCOLCE-208ENST00000487172 TBC1D2Q9BYX2 928 aa22.99■■□□□ 1.27
PCOLCE-208ENST00000487172 NBPF3Q9H094 633 aa22.99■■□□□ 1.27
PCOLCE-208ENST00000487172 ZBTB21Q9ULJ3 1066 aa22.99■■□□□ 1.27
PCOLCE-208ENST00000487172 FAM155AB1AL88 458 aaPredicted RBP22.98■■□□□ 1.27
PCOLCE-208ENST00000487172 CYP21A2P08686 494 aa22.98■■□□□ 1.27
PCOLCE-208ENST00000487172 ZBTB48P10074 688 aaPredicted RBP22.98■■□□□ 1.27
PCOLCE-208ENST00000487172 MFSD6Q6ZSS7 791 aa22.98■■□□□ 1.27
PCOLCE-208ENST00000487172 OPTNQ96CV9 577 aa22.98■■□□□ 1.27
PCOLCE-208ENST00000487172 WNK4Q96J92 1243 aa22.98■■□□□ 1.27
PCOLCE-208ENST00000487172 TACC3Q9Y6A5 838 aa22.98■■□□□ 1.27
PCOLCE-208ENST00000487172 GH2P01242 217 aa22.97■■□□□ 1.27
PCOLCE-208ENST00000487172 AKR1B1P15121 316 aa22.97■■□□□ 1.27
PCOLCE-208ENST00000487172 SPRYD7Q5W111 196 aa22.97■■□□□ 1.27
PCOLCE-208ENST00000487172 CYP4F22Q6NT55 531 aa22.97■■□□□ 1.27
PCOLCE-208ENST00000487172 TMEM179Q6ZVK1 233 aa22.97■■□□□ 1.27
PCOLCE-208ENST00000487172 TBC1D10CQ8IV04 446 aa22.97■■□□□ 1.27
PCOLCE-208ENST00000487172 USP17L5A8MUK1 530 aa22.96■■□□□ 1.27
PCOLCE-208ENST00000487172 PRDM1O75626 825 aa22.96■■□□□ 1.27
PCOLCE-208ENST00000487172 PPIL2Q13356 520 aa22.96■■□□□ 1.27
PCOLCE-208ENST00000487172 C8orf34Q49A92 452 aa22.96■■□□□ 1.27
PCOLCE-208ENST00000487172 CAPNS2Q96L46 248 aa22.96■■□□□ 1.27
PCOLCE-208ENST00000487172 INCENPQ9NQS7 918 aa22.96■■□□□ 1.27
PCOLCE-208ENST00000487172 GUCY1A2P33402 732 aa22.95■■□□□ 1.26
PCOLCE-208ENST00000487172 GJA5P36382 358 aa22.95■■□□□ 1.26
PCOLCE-208ENST00000487172 SHROOM1Q2M3G4 852 aaPredicted RBP22.95■■□□□ 1.26
PCOLCE-208ENST00000487172 RNF20Q5VTR2 975 aa22.95■■□□□ 1.26
PCOLCE-208ENST00000487172 CREB3L3Q68CJ9 461 aa22.95■■□□□ 1.26
PCOLCE-208ENST00000487172 PAXIP1Q6ZW49 1069 aaPredicted RBP22.95■■□□□ 1.26
PCOLCE-208ENST00000487172 PHIPQ8WWQ0 1821 aa22.95■■□□□ 1.26
PCOLCE-208ENST00000487172 WDR18Q9BV38 432 aa22.95■■□□□ 1.26
PCOLCE-208ENST00000487172 WDR33Q9C0J8 1336 aaKnown RBP22.95■■□□□ 1.26
PCOLCE-208ENST00000487172 AS3MTQ9HBK9 375 aa22.95■■□□□ 1.26
PCOLCE-208ENST00000487172 ZHX2Q9Y6X8 837 aa22.95■■□□□ 1.26
PCOLCE-208ENST00000487172 GREB1LQ9C091 1923 aaPredicted RBP22.94■■□□□ 1.26
PCOLCE-208ENST00000487172 MPHOSPH10O00566 681 aaKnown RBP22.94■■□□□ 1.26
PCOLCE-208ENST00000487172 SLC27A2O14975 620 aa22.94■■□□□ 1.26
PCOLCE-208ENST00000487172 NOGQ13253 232 aa22.94■■□□□ 1.26
PCOLCE-208ENST00000487172 NEDD1Q8NHV4 660 aa22.94■■□□□ 1.26
PCOLCE-208ENST00000487172 CNKSR2Q8WXI2 1034 aa22.94■■□□□ 1.26
PCOLCE-208ENST00000487172 OTUD5Q96G74 571 aa22.94■■□□□ 1.26
PCOLCE-208ENST00000487172 GNL3Q9BVP2 549 aaKnown RBP eCLIP22.94■■□□□ 1.26
PCOLCE-208ENST00000487172 USP26Q9BXU7 913 aa22.94■■□□□ 1.26
PCOLCE-208ENST00000487172 CNNM2Q9H8M5 875 aa22.94■■□□□ 1.26
PCOLCE-208ENST00000487172 AFG3L2Q9Y4W6 797 aa22.94■■□□□ 1.26
PCOLCE-208ENST00000487172 PLIN4Q96Q06 1357 aa22.93■■□□□ 1.26
PCOLCE-208ENST00000487172 CXCL11O14625 94 aa22.93■■□□□ 1.26
PCOLCE-208ENST00000487172 VEGFBP49765 207 aa22.93■■□□□ 1.26
PCOLCE-208ENST00000487172 TFAP4Q01664 338 aa22.93■■□□□ 1.26
PCOLCE-208ENST00000487172 SEPT2Q15019 361 aa22.93■■□□□ 1.26
PCOLCE-208ENST00000487172 TSGA10IPQ3SY00 556 aa22.93■■□□□ 1.26
PCOLCE-208ENST00000487172 DNAJC5GQ8N7S2 189 aa22.93■■□□□ 1.26
PCOLCE-208ENST00000487172 ZNF280CQ8ND82 737 aa22.93■■□□□ 1.26
PCOLCE-208ENST00000487172 KCNB2Q92953 911 aa22.93■■□□□ 1.26
PCOLCE-208ENST00000487172 KRT23Q9C075 422 aa22.93■■□□□ 1.26
PCOLCE-208ENST00000487172 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.93■■□□□ 1.26
PCOLCE-208ENST00000487172 KCNH4Q9UQ05 1017 aa22.93■■□□□ 1.26
PCOLCE-208ENST00000487172 IGKV6D-41A0A0C4DH26 115 aa22.92■■□□□ 1.26
PCOLCE-208ENST00000487172 E7EWF7 191 aa22.92■■□□□ 1.26
PCOLCE-208ENST00000487172 IRF6O14896 467 aa22.92■■□□□ 1.26
PCOLCE-208ENST00000487172 TSPY3P0CV98 308 aa22.92■■□□□ 1.26
PCOLCE-208ENST00000487172 TSPY8P0CW00 308 aa22.92■■□□□ 1.26
PCOLCE-208ENST00000487172 HSPA4P34932 840 aa22.92■■□□□ 1.26
PCOLCE-208ENST00000487172 MAP2K2P36507 400 aa22.92■■□□□ 1.26
PCOLCE-208ENST00000487172 RAB3GAP1Q15042 981 aa22.92■■□□□ 1.26
PCOLCE-208ENST00000487172 ESR2Q92731 530 aa22.92■■□□□ 1.26
PCOLCE-208ENST00000487172 KANSL2Q9H9L4 492 aa22.92■■□□□ 1.26
PCOLCE-208ENST00000487172 FRMD4AQ9P2Q2 1039 aaPredicted RBP22.92■■□□□ 1.26
PCOLCE-208ENST00000487172 NEDD4P46934 1319 aa22.91■■□□□ 1.26
PCOLCE-208ENST00000487172 TSPY2A6NKD2 308 aa22.91■■□□□ 1.26
PCOLCE-208ENST00000487172 RANBP6O60518 1105 aaKnown RBP22.91■■□□□ 1.26
PCOLCE-208ENST00000487172 FAM47AQ5JRC9 791 aa22.91■■□□□ 1.26
PCOLCE-208ENST00000487172 RRP12Q5JTH9 1297 aaKnown RBP22.91■■□□□ 1.26
PCOLCE-208ENST00000487172 CCDC84Q86UT8 332 aaPredicted RBP22.91■■□□□ 1.26
PCOLCE-208ENST00000487172 TOMM22Q9NS69 142 aa22.91■■□□□ 1.26
PCOLCE-208ENST00000487172 TCP11L1Q9NUJ3 509 aa22.91■■□□□ 1.26
PCOLCE-208ENST00000487172 TESPA1A2RU30 521 aaPredicted RBP22.9■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms