RNA–Protein interactions for RNA: ENST00000473879.1

BRAT1-205, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 3

Gene BRAT1, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-205ENST00000473879 HERC5Q9UII4 1024 aaKnown RBP15.79■□□□□ 0.12
BRAT1-205ENST00000473879 U3KPZ7 1027 aaPredicted RBP15.79■□□□□ 0.12
BRAT1-205ENST00000473879 ATAD5Q96QE3 1844 aa15.78■□□□□ 0.12
BRAT1-205ENST00000473879 MAGEB6P1A0A0J9YX57 407 aa15.78■□□□□ 0.12
BRAT1-205ENST00000473879 MBD4O95243 580 aa15.78■□□□□ 0.12
BRAT1-205ENST00000473879 PTPRAP18433 802 aa15.78■□□□□ 0.12
BRAT1-205ENST00000473879 ANP32AP39687 249 aaKnown RBP15.78■□□□□ 0.12
BRAT1-205ENST00000473879 PTH1RQ03431 593 aa15.78■□□□□ 0.12
BRAT1-205ENST00000473879 DGKZQ13574 1117 aa15.78■□□□□ 0.12
BRAT1-205ENST00000473879 RNF20Q5VTR2 975 aa15.78■□□□□ 0.12
BRAT1-205ENST00000473879 FOXP4Q8IVH2 680 aaPredicted RBP15.78■□□□□ 0.12
BRAT1-205ENST00000473879 LCORLQ8N3X6 602 aa15.78■□□□□ 0.12
BRAT1-205ENST00000473879 MCOLN1Q9GZU1 580 aa15.78■□□□□ 0.12
BRAT1-205ENST00000473879 ZCCHC17Q9NP64 241 aaKnown RBP15.78■□□□□ 0.12
BRAT1-205ENST00000473879 PICK1Q9NRD5 415 aa15.78■□□□□ 0.12
BRAT1-205ENST00000473879 PHIPQ8WWQ0 1821 aa15.78■□□□□ 0.12
BRAT1-205ENST00000473879 CXCL11O14625 94 aa15.77■□□□□ 0.12
BRAT1-205ENST00000473879 FKTNO75072 461 aa15.77■□□□□ 0.12
BRAT1-205ENST00000473879 HSPD1P10809 573 aaKnown RBP15.77■□□□□ 0.12
BRAT1-205ENST00000473879 HSPA4P34932 840 aa15.77■□□□□ 0.12
BRAT1-205ENST00000473879 ANAPC15P60006 121 aa15.77■□□□□ 0.12
BRAT1-205ENST00000473879 CRHR2Q13324 411 aa15.77■□□□□ 0.12
BRAT1-205ENST00000473879 CTU1Q7Z7A3 348 aaKnown RBP15.77■□□□□ 0.12
BRAT1-205ENST00000473879 FAM43AQ8N2R8 423 aa15.77■□□□□ 0.12
BRAT1-205ENST00000473879 RBM8AQ9Y5S9 174 aaKnown RBP15.77■□□□□ 0.12
BRAT1-205ENST00000473879 FAM196BA6NMK8 535 aa15.76■□□□□ 0.11
BRAT1-205ENST00000473879 BTBD19C9JJ37 291 aa15.76■□□□□ 0.11
BRAT1-205ENST00000473879 USP5P45974 858 aa15.76■□□□□ 0.11
BRAT1-205ENST00000473879 ABHD8Q96I13 439 aa15.76■□□□□ 0.11
BRAT1-205ENST00000473879 STRBPQ96SI9 672 aaKnown RBP15.76■□□□□ 0.11
BRAT1-205ENST00000473879 DNAJC18Q9H819 358 aa15.76■□□□□ 0.11
BRAT1-205ENST00000473879 ZFYVE28Q9HCC9 887 aa15.76■□□□□ 0.11
BRAT1-205ENST00000473879 CTNNA3Q9UI47 895 aa15.76■□□□□ 0.11
BRAT1-205ENST00000473879 PALD1Q9ULE6 856 aa15.76■□□□□ 0.11
BRAT1-205ENST00000473879 AFG3L2Q9Y4W6 797 aa15.76■□□□□ 0.11
BRAT1-205ENST00000473879 ZHX2Q9Y6X8 837 aa15.76■□□□□ 0.11
BRAT1-205ENST00000473879 PTPRFP10586 1907 aa15.76■□□□□ 0.11
BRAT1-205ENST00000473879 LAMA4Q16363 1823 aa15.75■□□□□ 0.11
BRAT1-205ENST00000473879 ZMYM6O95789 1325 aa15.75■□□□□ 0.11
BRAT1-205ENST00000473879 BAZ2AQ9UIF9 1905 aaKnown RBP15.75■□□□□ 0.11
BRAT1-205ENST00000473879 FOXP2O15409 715 aa15.75■□□□□ 0.11
BRAT1-205ENST00000473879 HLA-DOAP06340 250 aa15.75■□□□□ 0.11
BRAT1-205ENST00000473879 ZKSCAN1P17029 563 aaPredicted RBP15.75■□□□□ 0.11
BRAT1-205ENST00000473879 CAP2P40123 477 aa15.75■□□□□ 0.11
BRAT1-205ENST00000473879 TAF1CQ15572 869 aaPredicted RBP15.75■□□□□ 0.11
BRAT1-205ENST00000473879 ANKRD23Q86SG2 305 aa15.75■□□□□ 0.11
BRAT1-205ENST00000473879 NACAP1Q9BZK3 213 aa15.75■□□□□ 0.11
BRAT1-205ENST00000473879 EHD4Q9H223 541 aa15.75■□□□□ 0.11
BRAT1-205ENST00000473879 ARMT1Q9H993 441 aa15.75■□□□□ 0.11
BRAT1-205ENST00000473879 GABPAQ06546 454 aa15.74■□□□□ 0.11
BRAT1-205ENST00000473879 MOGSQ13724 837 aa15.74■□□□□ 0.11
BRAT1-205ENST00000473879 NECTIN1Q15223 517 aa15.74■□□□□ 0.11
BRAT1-205ENST00000473879 PKN2Q16513 984 aaKnown RBP15.74■□□□□ 0.11
BRAT1-205ENST00000473879 VPS53Q5VIR6 699 aa15.74■□□□□ 0.11
BRAT1-205ENST00000473879 CRACR2BQ8N4Y2 399 aaPredicted RBP15.74■□□□□ 0.11
BRAT1-205ENST00000473879 TBC1D2Q9BYX2 928 aa15.74■□□□□ 0.11
BRAT1-205ENST00000473879 CRNKL1Q9BZJ0 848 aaKnown RBP15.74■□□□□ 0.11
BRAT1-205ENST00000473879 DCP1AQ9NPI6 582 aaPredicted RBP15.74■□□□□ 0.11
BRAT1-205ENST00000473879 SAP30BPQ9UHR5 308 aaKnown RBP15.74■□□□□ 0.11
BRAT1-205ENST00000473879 TAOK2Q9UL54 1235 aa15.74■□□□□ 0.11
BRAT1-205ENST00000473879 SLC4A4Q9Y6R1 1079 aa15.74■□□□□ 0.11
BRAT1-205ENST00000473879 GREB1LQ9C091 1923 aaPredicted RBP15.73■□□□□ 0.11
BRAT1-205ENST00000473879 A0A0G2JLL6 359 aaPredicted RBP15.73■□□□□ 0.11
BRAT1-205ENST00000473879 PATL2C9JE40 543 aaKnown RBP15.73■□□□□ 0.11
BRAT1-205ENST00000473879 APPP05067 770 aa15.73■□□□□ 0.11
BRAT1-205ENST00000473879 RRP1BQ14684 758 aaKnown RBP15.73■□□□□ 0.11
BRAT1-205ENST00000473879 CREB3L3Q68CJ9 461 aa15.73■□□□□ 0.11
BRAT1-205ENST00000473879 FASTKD5Q7L8L6 764 aaKnown RBP15.73■□□□□ 0.11
BRAT1-205ENST00000473879 PRRT2Q7Z6L0 340 aaPredicted RBP15.73■□□□□ 0.11
BRAT1-205ENST00000473879 TTC6Q86TZ1 520 aa15.73■□□□□ 0.11
BRAT1-205ENST00000473879 IL27Q8NEV9 243 aa15.73■□□□□ 0.11
BRAT1-205ENST00000473879 IL17RAQ96F46 866 aa15.73■□□□□ 0.11
BRAT1-205ENST00000473879 DDRGK1Q96HY6 314 aa15.73■□□□□ 0.11
BRAT1-205ENST00000473879 TRIM34Q9BYJ4 488 aa15.73■□□□□ 0.11
BRAT1-205ENST00000473879 GINM1Q9NU53 330 aa15.73■□□□□ 0.11
BRAT1-205ENST00000473879 ROBO3Q96MS0 1386 aa15.73■□□□□ 0.11
BRAT1-205ENST00000473879 SLC27A2O14975 620 aa15.72■□□□□ 0.11
BRAT1-205ENST00000473879 TLR2O60603 784 aa15.72■□□□□ 0.11
BRAT1-205ENST00000473879 SP3Q02447 781 aa15.72■□□□□ 0.11
BRAT1-205ENST00000473879 KRT32Q14532 448 aa15.72■□□□□ 0.11
BRAT1-205ENST00000473879 RABEP1Q15276 862 aa15.72■□□□□ 0.11
BRAT1-205ENST00000473879 ALX1Q15699 326 aa15.72■□□□□ 0.11
BRAT1-205ENST00000473879 IMMTQ16891 758 aaKnown RBP15.72■□□□□ 0.11
BRAT1-205ENST00000473879 GIMAP6Q6P9H5 292 aa15.72■□□□□ 0.11
BRAT1-205ENST00000473879 KCNB2Q92953 911 aa15.72■□□□□ 0.11
BRAT1-205ENST00000473879 ERO1AQ96HE7 468 aa15.72■□□□□ 0.11
BRAT1-205ENST00000473879 NAPBQ9H115 298 aa15.72■□□□□ 0.11
BRAT1-205ENST00000473879 EPB41L4AQ9HCS5 686 aaPredicted RBP15.72■□□□□ 0.11
BRAT1-205ENST00000473879 ATP8A2Q9NTI2 1148 aa15.72■□□□□ 0.11
BRAT1-205ENST00000473879 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.72■□□□□ 0.11
BRAT1-205ENST00000473879 USP17L5A8MUK1 530 aa15.71■□□□□ 0.11
BRAT1-205ENST00000473879 GSG1L2A8MUP6 293 aa15.71■□□□□ 0.11
BRAT1-205ENST00000473879 PDHXO00330 501 aa15.71■□□□□ 0.11
BRAT1-205ENST00000473879 PRKAB2O43741 272 aa15.71■□□□□ 0.11
BRAT1-205ENST00000473879 ASNSP08243 561 aa15.71■□□□□ 0.11
BRAT1-205ENST00000473879 TDO2P48775 406 aa15.71■□□□□ 0.11
BRAT1-205ENST00000473879 GPAT2Q6NUI2 795 aa15.71■□□□□ 0.11
BRAT1-205ENST00000473879 TATDN1Q6P1N9 297 aa15.71■□□□□ 0.11
BRAT1-205ENST00000473879 SDR42E1Q8WUS8 393 aa15.71■□□□□ 0.11
BRAT1-205ENST00000473879 SERPINB13Q9UIV8 391 aa15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms