RNA–Protein interactions for RNA: ENST00000473711.1

SP140-208, Transcript of SP140 nuclear body protein, humanhuman

TSL 2

Gene SP140, Length 644 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-208ENST00000473711 TCP10Q12799 353 aa12.64□□□□□ -0.39
SP140-208ENST00000473711 TMEM67Q5HYA8 995 aa12.64□□□□□ -0.39
SP140-208ENST00000473711 RBM26Q5T8P6 1007 aaKnown RBP12.64□□□□□ -0.39
SP140-208ENST00000473711 TTC6Q86TZ1 520 aa12.64□□□□□ -0.39
SP140-208ENST00000473711 FBXL16Q8N461 479 aa12.64□□□□□ -0.39
SP140-208ENST00000473711 IGDCC4Q8TDY8 1250 aa12.64□□□□□ -0.39
SP140-208ENST00000473711 TMEM87BQ96K49 555 aa12.64□□□□□ -0.39
SP140-208ENST00000473711 OSBPL5Q9H0X9 879 aaPredicted RBP12.64□□□□□ -0.39
SP140-208ENST00000473711 MKNK2Q9HBH9 465 aa12.64□□□□□ -0.39
SP140-208ENST00000473711 LAMA4Q16363 1823 aa12.64□□□□□ -0.39
SP140-208ENST00000473711 ADAMTSL1Q8N6G6 1762 aa12.64□□□□□ -0.39
SP140-208ENST00000473711 ZNF541Q9H0D2 1346 aa12.63□□□□□ -0.39
SP140-208ENST00000473711 DTNBO60941 627 aa12.63□□□□□ -0.39
SP140-208ENST00000473711 RPS12P25398 132 aaKnown RBP12.63□□□□□ -0.39
SP140-208ENST00000473711 ST3GAL1Q11201 340 aa12.63□□□□□ -0.39
SP140-208ENST00000473711 FAM47AQ5JRC9 791 aa12.63□□□□□ -0.39
SP140-208ENST00000473711 POTEGQ6S5H5 508 aa12.63□□□□□ -0.39
SP140-208ENST00000473711 SLC44A5Q8NCS7 719 aa12.63□□□□□ -0.39
SP140-208ENST00000473711 INTS4Q96HW7 963 aaKnown RBP12.63□□□□□ -0.39
SP140-208ENST00000473711 IDI2Q9BXS1 227 aa12.63□□□□□ -0.39
SP140-208ENST00000473711 SENP2Q9HC62 589 aa12.63□□□□□ -0.39
SP140-208ENST00000473711 ZNF70Q9UC06 446 aaPredicted RBP12.63□□□□□ -0.39
SP140-208ENST00000473711 FAM198AQ9UFP1 575 aa12.63□□□□□ -0.39
SP140-208ENST00000473711 BRPF3Q9ULD4 1205 aa12.63□□□□□ -0.39
SP140-208ENST00000473711 ANGEL1Q9UNK9 670 aaKnown RBP12.63□□□□□ -0.39
SP140-208ENST00000473711 PSME4Q14997 1843 aa12.62□□□□□ -0.39
SP140-208ENST00000473711 KLF18A0A0U1RQI7 1052 aa12.62□□□□□ -0.39
SP140-208ENST00000473711 CLRN2A0PK11 232 aa12.62□□□□□ -0.39
SP140-208ENST00000473711 ERICH2A1L162 156 aa12.62□□□□□ -0.39
SP140-208ENST00000473711 TCP10L2B9ZVM9 353 aa12.62□□□□□ -0.39
SP140-208ENST00000473711 PFKFB2O60825 505 aa12.62□□□□□ -0.39
SP140-208ENST00000473711 PDIA3P30101 505 aaKnown RBP12.62□□□□□ -0.39
SP140-208ENST00000473711 CDK8P49336 464 aa12.62□□□□□ -0.39
SP140-208ENST00000473711 C1QTNF8P60827 252 aa12.62□□□□□ -0.39
SP140-208ENST00000473711 CCT2P78371 535 aaKnown RBP12.62□□□□□ -0.39
SP140-208ENST00000473711 GPR162Q16538 588 aa12.62□□□□□ -0.39
SP140-208ENST00000473711 NFXL1Q6ZNB6 911 aa12.62□□□□□ -0.39
SP140-208ENST00000473711 C16orf86Q6ZW13 317 aa12.62□□□□□ -0.39
SP140-208ENST00000473711 RAB11FIP4Q86YS3 637 aa12.62□□□□□ -0.39
SP140-208ENST00000473711 ZNF444Q8N0Y2 327 aaPredicted RBP12.62□□□□□ -0.39
SP140-208ENST00000473711 MTMR14Q8NCE2 650 aa12.62□□□□□ -0.39
SP140-208ENST00000473711 ZNF274Q96GC6 653 aaPredicted RBP12.62□□□□□ -0.39
SP140-208ENST00000473711 UBAC1Q9BSL1 405 aa12.62□□□□□ -0.39
SP140-208ENST00000473711 LY9Q9HBG7 655 aa12.62□□□□□ -0.39
SP140-208ENST00000473711 CWC22Q9HCG8 908 aaKnown RBP12.62□□□□□ -0.39
SP140-208ENST00000473711 MYOZ2Q9NPC6 264 aa12.62□□□□□ -0.39
SP140-208ENST00000473711 TMOD2Q9NZR1 351 aa12.62□□□□□ -0.39
SP140-208ENST00000473711 CHMP5Q9NZZ3 219 aa12.62□□□□□ -0.39
SP140-208ENST00000473711 RNF181Q9P0P0 153 aa12.62□□□□□ -0.39
SP140-208ENST00000473711 CNOT7Q9UIV1 285 aaKnown RBP12.62□□□□□ -0.39
SP140-208ENST00000473711 TIAM2Q8IVF5 1701 aa12.62□□□□□ -0.39
SP140-208ENST00000473711 TSPY2A6NKD2 308 aa12.61□□□□□ -0.39
SP140-208ENST00000473711 HLA-DOAP06340 250 aa12.61□□□□□ -0.39
SP140-208ENST00000473711 DDIT3P35638 169 aa12.61□□□□□ -0.39
SP140-208ENST00000473711 EVCP57679 992 aa12.61□□□□□ -0.39
SP140-208ENST00000473711 ZNF280AP59817 542 aaPredicted RBP12.61□□□□□ -0.39
SP140-208ENST00000473711 TFAP4Q01664 338 aa12.61□□□□□ -0.39
SP140-208ENST00000473711 WTAPQ15007 396 aa12.61□□□□□ -0.39
SP140-208ENST00000473711 SART3Q15020 963 aaKnown RBP12.61□□□□□ -0.39
SP140-208ENST00000473711 NBPF9Q3BBW0 867 aa12.61□□□□□ -0.39
SP140-208ENST00000473711 C9orf131Q5VYM1 1079 aa12.61□□□□□ -0.39
SP140-208ENST00000473711 ZSCAN29Q8IWY8 852 aaPredicted RBP12.61□□□□□ -0.39
SP140-208ENST00000473711 MICALL2Q8IY33 904 aa12.61□□□□□ -0.39
SP140-208ENST00000473711 DPF2Q92785 391 aa12.61□□□□□ -0.39
SP140-208ENST00000473711 ZBED3Q96IU2 234 aaPredicted RBP12.61□□□□□ -0.39
SP140-208ENST00000473711 ZSCAN10Q96SZ4 725 aaPredicted RBP12.61□□□□□ -0.39
SP140-208ENST00000473711 SMC3Q9UQE7 1217 aa12.61□□□□□ -0.39
SP140-208ENST00000473711 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.61□□□□□ -0.39
SP140-208ENST00000473711 ROBO3Q96MS0 1386 aa12.6□□□□□ -0.39
SP140-208ENST00000473711 NAV1Q8NEY1 1877 aa12.6□□□□□ -0.39
SP140-208ENST00000473711 DDTLA6NHG4 134 aaPredicted RBP12.6□□□□□ -0.39
SP140-208ENST00000473711 CCDC69A6NI79 296 aa12.6□□□□□ -0.39
SP140-208ENST00000473711 WNT10BO00744 389 aa12.6□□□□□ -0.39
SP140-208ENST00000473711 NMT2O60551 498 aa12.6□□□□□ -0.39
SP140-208ENST00000473711 ENTPD3O75355 529 aa12.6□□□□□ -0.39
SP140-208ENST00000473711 RASA1P20936 1047 aa12.6□□□□□ -0.39
SP140-208ENST00000473711 LIFRP42702 1097 aa12.6□□□□□ -0.39
SP140-208ENST00000473711 MMP14P50281 582 aa12.6□□□□□ -0.39
SP140-208ENST00000473711 SCRN1Q12765 414 aa12.6□□□□□ -0.39
SP140-208ENST00000473711 LCE2DQ5TA82 110 aaPredicted RBP12.6□□□□□ -0.39
SP140-208ENST00000473711 SH3BP5LQ7L8J4 393 aa12.6□□□□□ -0.39
SP140-208ENST00000473711 SAMD7Q7Z3H4 446 aa12.6□□□□□ -0.39
SP140-208ENST00000473711 IQCA1Q86XH1 822 aa12.6□□□□□ -0.39
SP140-208ENST00000473711 TMTC2Q8N394 836 aa12.6□□□□□ -0.39
SP140-208ENST00000473711 GTF3C6Q969F1 213 aa12.6□□□□□ -0.39
SP140-208ENST00000473711 MTA3Q9BTC8 594 aa12.6□□□□□ -0.39
SP140-208ENST00000473711 VEZTQ9HBM0 779 aa12.6□□□□□ -0.39
SP140-208ENST00000473711 ZNF287Q9HBT7 754 aa12.6□□□□□ -0.39
SP140-208ENST00000473711 NCOA5Q9HCD5 579 aaKnown RBP12.6□□□□□ -0.39
SP140-208ENST00000473711 CDK5RAP2Q96SN8 1893 aa12.59□□□□□ -0.39
SP140-208ENST00000473711 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.59□□□□□ -0.39
SP140-208ENST00000473711 GOLGA8BA8MQT2 603 aa12.59□□□□□ -0.39
SP140-208ENST00000473711 H7C1D1 291 aa12.59□□□□□ -0.39
SP140-208ENST00000473711 MYO1BO43795 1136 aa12.59□□□□□ -0.39
SP140-208ENST00000473711 EGFRP00533 1210 aa12.59□□□□□ -0.39
SP140-208ENST00000473711 TSPY3P0CV98 308 aa12.59□□□□□ -0.39
SP140-208ENST00000473711 TSPY8P0CW00 308 aa12.59□□□□□ -0.39
SP140-208ENST00000473711 SLURP2P0DP57 97 aa12.59□□□□□ -0.39
SP140-208ENST00000473711 GABPAQ06546 454 aa12.59□□□□□ -0.39
SP140-208ENST00000473711 SEC23AQ15436 765 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms