RNA–Protein interactions for RNA: ENST00000467378.1

USP11-205, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 696 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-205ENST00000467378 ANKRD23Q86SG2 305 aa23.04■■□□□ 1.28
USP11-205ENST00000467378 RIOK1Q9BRS2 568 aaKnown RBP23.04■■□□□ 1.28
USP11-205ENST00000467378 UNC93B1Q9H1C4 597 aa23.04■■□□□ 1.28
USP11-205ENST00000467378 RNF113AO15541 343 aaKnown RBP23.03■■□□□ 1.28
USP11-205ENST00000467378 PLCG2P16885 1265 aa23.03■■□□□ 1.28
USP11-205ENST00000467378 PRKCZQ05513 592 aa23.03■■□□□ 1.28
USP11-205ENST00000467378 PPATQ06203 517 aa23.03■■□□□ 1.28
USP11-205ENST00000467378 TTC22Q5TAA0 569 aa23.03■■□□□ 1.28
USP11-205ENST00000467378 SKAP1Q86WV1 359 aa23.03■■□□□ 1.28
USP11-205ENST00000467378 FAM151AQ8WW52 585 aa23.03■■□□□ 1.28
USP11-205ENST00000467378 HOOK2Q96ED9 719 aa23.03■■□□□ 1.28
USP11-205ENST00000467378 FSD1Q9BTV5 496 aa23.03■■□□□ 1.28
USP11-205ENST00000467378 COL6A3P12111 3177 aa23.03■■□□□ 1.28
USP11-205ENST00000467378 MAGEB6P1A0A0J9YX57 407 aa23.02■■□□□ 1.28
USP11-205ENST00000467378 TRIM6-TRIM34B2RNG4 842 aa23.02■■□□□ 1.28
USP11-205ENST00000467378 SGPL1O95470 568 aa23.02■■□□□ 1.28
USP11-205ENST00000467378 ZFYP08048 801 aaPredicted RBP23.02■■□□□ 1.28
USP11-205ENST00000467378 RGS3P49796 1198 aa23.02■■□□□ 1.28
USP11-205ENST00000467378 TEX11Q8IYF3 940 aa23.02■■□□□ 1.28
USP11-205ENST00000467378 SLAIN1Q8ND83 568 aa23.02■■□□□ 1.28
USP11-205ENST00000467378 DDX4Q9NQI0 724 aaKnown RBP23.02■■□□□ 1.28
USP11-205ENST00000467378 MYH1P12882 1939 aa23.02■■□□□ 1.28
USP11-205ENST00000467378 ENTPD3O75355 529 aa23.01■■□□□ 1.27
USP11-205ENST00000467378 NPM3O75607 178 aaKnown RBP23.01■■□□□ 1.27
USP11-205ENST00000467378 GSPT1P15170 499 aaKnown RBP23.01■■□□□ 1.27
USP11-205ENST00000467378 FCGRTP55899 365 aa23.01■■□□□ 1.27
USP11-205ENST00000467378 LRRFIP1Q32MZ4 808 aaKnown RBP23.01■■□□□ 1.27
USP11-205ENST00000467378 DCAF15Q66K64 600 aa23.01■■□□□ 1.27
USP11-205ENST00000467378 CERS3Q8IU89 383 aa23.01■■□□□ 1.27
USP11-205ENST00000467378 ZFPM1Q8IX07 1006 aa23.01■■□□□ 1.27
USP11-205ENST00000467378 RILPL2Q969X0 211 aa23.01■■□□□ 1.27
USP11-205ENST00000467378 ADGRA2Q96PE1 1338 aa23.01■■□□□ 1.27
USP11-205ENST00000467378 TFRCP02786 760 aaKnown RBP23■■□□□ 1.27
USP11-205ENST00000467378 TCP10Q12799 353 aa23■■□□□ 1.27
USP11-205ENST00000467378 TICAM2Q86XR7 235 aa23■■□□□ 1.27
USP11-205ENST00000467378 ZNF341Q9BYN7 854 aa23■■□□□ 1.27
USP11-205ENST00000467378 PUS7LQ9H0K6 701 aaKnown RBP23■■□□□ 1.27
USP11-205ENST00000467378 INPP5BP32019 993 aa22.99■■□□□ 1.27
USP11-205ENST00000467378 PICALMQ13492 652 aa22.99■■□□□ 1.27
USP11-205ENST00000467378 MIGA2Q7L4E1 593 aa22.99■■□□□ 1.27
USP11-205ENST00000467378 LCORLQ8N3X6 602 aa22.99■■□□□ 1.27
USP11-205ENST00000467378 APPBP2Q92624 585 aa22.99■■□□□ 1.27
USP11-205ENST00000467378 OSBP2Q969R2 916 aa22.99■■□□□ 1.27
USP11-205ENST00000467378 GABRQQ9UN88 632 aa22.99■■□□□ 1.27
USP11-205ENST00000467378 RPAP1Q9BWH6 1393 aaPredicted RBP22.99■■□□□ 1.27
USP11-205ENST00000467378 ADCY3O60266 1144 aa22.98■■□□□ 1.27
USP11-205ENST00000467378 DEFB123Q8N688 67 aa22.98■■□□□ 1.27
USP11-205ENST00000467378 TGFBRAP1Q8WUH2 860 aa22.98■■□□□ 1.27
USP11-205ENST00000467378 ARMT1Q9H993 441 aa22.98■■□□□ 1.27
USP11-205ENST00000467378 MBD4O95243 580 aa22.97■■□□□ 1.27
USP11-205ENST00000467378 ZMYM1Q5SVZ6 1142 aa22.97■■□□□ 1.27
USP11-205ENST00000467378 SH3BP5LQ7L8J4 393 aa22.97■■□□□ 1.27
USP11-205ENST00000467378 PARK7Q99497 189 aaKnown RBP22.97■■□□□ 1.27
USP11-205ENST00000467378 NAV1Q8NEY1 1877 aa22.96■■□□□ 1.27
USP11-205ENST00000467378 SDSP20132 328 aa22.96■■□□□ 1.27
USP11-205ENST00000467378 MAPKAPK5Q8IW41 473 aa22.96■■□□□ 1.27
USP11-205ENST00000467378 DEFB118Q96PH6 123 aa22.96■■□□□ 1.27
USP11-205ENST00000467378 SEC62Q99442 399 aaKnown RBP22.96■■□□□ 1.27
USP11-205ENST00000467378 OSBPL5Q9H0X9 879 aaPredicted RBP22.96■■□□□ 1.27
USP11-205ENST00000467378 KCNH4Q9UQ05 1017 aa22.96■■□□□ 1.27
USP11-205ENST00000467378 BAZ2AQ9UIF9 1905 aaKnown RBP22.96■■□□□ 1.27
USP11-205ENST00000467378 DDTLA6NHG4 134 aaPredicted RBP22.95■■□□□ 1.26
USP11-205ENST00000467378 SIPA1L1O43166 1804 aa22.95■■□□□ 1.26
USP11-205ENST00000467378 COL2A1P02458 1487 aaPredicted RBP22.95■■□□□ 1.26
USP11-205ENST00000467378 BCRP11274 1271 aa22.95■■□□□ 1.26
USP11-205ENST00000467378 ELNP15502 786 aa22.95■■□□□ 1.26
USP11-205ENST00000467378 FLT1P17948 1338 aa22.95■■□□□ 1.26
USP11-205ENST00000467378 DDX60LQ5H9U9 1706 aaKnown RBP22.95■■□□□ 1.26
USP11-205ENST00000467378 DOCK3Q8IZD9 2030 aa22.95■■□□□ 1.26
USP11-205ENST00000467378 STRBPQ96SI9 672 aaKnown RBP22.95■■□□□ 1.26
USP11-205ENST00000467378 CRNKL1Q9BZJ0 848 aaKnown RBP22.95■■□□□ 1.26
USP11-205ENST00000467378 A0A0C4DFX4 3053 aa22.94■■□□□ 1.26
USP11-205ENST00000467378 ATRNL1Q5VV63 1379 aa22.94■■□□□ 1.26
USP11-205ENST00000467378 M0R2C6 588 aa22.94■■□□□ 1.26
USP11-205ENST00000467378 INHAP05111 366 aa22.94■■□□□ 1.26
USP11-205ENST00000467378 CYP2C8P10632 490 aa22.94■■□□□ 1.26
USP11-205ENST00000467378 Q7L0L9 218 aa22.94■■□□□ 1.26
USP11-205ENST00000467378 PAWRQ96IZ0 340 aaKnown RBP22.94■■□□□ 1.26
USP11-205ENST00000467378 PRKAB2O43741 272 aa22.93■■□□□ 1.26
USP11-205ENST00000467378 CAPN2P17655 700 aa22.93■■□□□ 1.26
USP11-205ENST00000467378 USP5P45974 858 aa22.93■■□□□ 1.26
USP11-205ENST00000467378 FLT3LGP49771 235 aa22.93■■□□□ 1.26
USP11-205ENST00000467378 MOGSQ13724 837 aa22.93■■□□□ 1.26
USP11-205ENST00000467378 GPR153Q6NV75 609 aa22.93■■□□□ 1.26
USP11-205ENST00000467378 HELLSQ9NRZ9 838 aa22.93■■□□□ 1.26
USP11-205ENST00000467378 GPAA1O43292 621 aa22.92■■□□□ 1.26
USP11-205ENST00000467378 BMP8BP34820 402 aa22.92■■□□□ 1.26
USP11-205ENST00000467378 ZSCAN29Q8IWY8 852 aaPredicted RBP22.92■■□□□ 1.26
USP11-205ENST00000467378 C7orf61Q8IZ16 206 aa22.92■■□□□ 1.26
USP11-205ENST00000467378 SDR42E1Q8WUS8 393 aa22.92■■□□□ 1.26
USP11-205ENST00000467378 FAM227BQ96M60 508 aa22.92■■□□□ 1.26
USP11-205ENST00000467378 GDF15Q99988 308 aa22.92■■□□□ 1.26
USP11-205ENST00000467378 TAOK2Q9UL54 1235 aa22.92■■□□□ 1.26
USP11-205ENST00000467378 STXBP5LQ9Y2K9 1186 aa22.92■■□□□ 1.26
USP11-205ENST00000467378 NMIQ13287 307 aaPredicted RBP22.91■■□□□ 1.26
USP11-205ENST00000467378 NECAB2Q7Z6G3 386 aa22.91■■□□□ 1.26
USP11-205ENST00000467378 ZMYND8Q9ULU4 1186 aaPredicted RBP22.91■■□□□ 1.26
USP11-205ENST00000467378 SLC4A4Q9Y6R1 1079 aa22.91■■□□□ 1.26
USP11-205ENST00000467378 A0A0D9SFI3 127 aa22.9■■□□□ 1.26
USP11-205ENST00000467378 MAP3K10Q02779 954 aa22.9■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 152.9 ms