RNA–Protein interactions for RNA: ENST00000460217.1

FN1-214, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 804 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-214ENST00000460217 GLIS2Q9BZE0 524 aaPredicted RBP12.65□□□□□ -0.38
FN1-214ENST00000460217 INCENPQ9NQS7 918 aa12.65□□□□□ -0.38
FN1-214ENST00000460217 CYP46A1Q9Y6A2 500 aa12.65□□□□□ -0.38
FN1-214ENST00000460217 DOCK1Q14185 1865 aa12.64□□□□□ -0.39
FN1-214ENST00000460217 FAM196BA6NMK8 535 aa12.64□□□□□ -0.39
FN1-214ENST00000460217 PHF20L1A8MW92 1017 aa12.64□□□□□ -0.39
FN1-214ENST00000460217 RANBP6O60518 1105 aaKnown RBP12.64□□□□□ -0.39
FN1-214ENST00000460217 KDM4AO75164 1064 aa12.64□□□□□ -0.39
FN1-214ENST00000460217 RPS6KB1P23443 525 aa12.64□□□□□ -0.39
FN1-214ENST00000460217 NF2P35240 595 aa12.64□□□□□ -0.39
FN1-214ENST00000460217 EXOSC10Q01780 885 aaKnown RBP12.64□□□□□ -0.39
FN1-214ENST00000460217 COL9A3Q14050 684 aaPredicted RBP12.64□□□□□ -0.39
FN1-214ENST00000460217 CERKLQ49MI3 558 aaPredicted RBP12.64□□□□□ -0.39
FN1-214ENST00000460217 RRP12Q5JTH9 1297 aaKnown RBP12.64□□□□□ -0.39
FN1-214ENST00000460217 PRAMEF18Q5VWM3 479 aa12.64□□□□□ -0.39
FN1-214ENST00000460217 MIGA2Q7L4E1 593 aa12.64□□□□□ -0.39
FN1-214ENST00000460217 STK11IPQ8N1F8 1099 aa12.64□□□□□ -0.39
FN1-214ENST00000460217 NEDD1Q8NHV4 660 aa12.64□□□□□ -0.39
FN1-214ENST00000460217 NKX2-3Q8TAU0 364 aa12.64□□□□□ -0.39
FN1-214ENST00000460217 ZNF341Q9BYN7 854 aa12.64□□□□□ -0.39
FN1-214ENST00000460217 UPF3BQ9BZI7 483 aaKnown RBP12.64□□□□□ -0.39
FN1-214ENST00000460217 TOMM22Q9NS69 142 aa12.64□□□□□ -0.39
FN1-214ENST00000460217 GINM1Q9NU53 330 aa12.64□□□□□ -0.39
FN1-214ENST00000460217 ZSWIM5Q9P217 1185 aa12.64□□□□□ -0.39
FN1-214ENST00000460217 ZNF112Q9UJU3 913 aa12.64□□□□□ -0.39
FN1-214ENST00000460217 OTOFQ9HC10 1997 aa12.63□□□□□ -0.39
FN1-214ENST00000460217 TSPY2A6NKD2 308 aa12.63□□□□□ -0.39
FN1-214ENST00000460217 PPP1R12BO60237 982 aaPredicted RBP12.63□□□□□ -0.39
FN1-214ENST00000460217 CTNND1O60716 968 aaKnown RBP12.63□□□□□ -0.39
FN1-214ENST00000460217 SLURP2P0DP57 97 aa12.63□□□□□ -0.39
FN1-214ENST00000460217 ANTXR2P58335 489 aa12.63□□□□□ -0.39
FN1-214ENST00000460217 TFAP4Q01664 338 aa12.63□□□□□ -0.39
FN1-214ENST00000460217 CYB5R4Q7L1T6 521 aa12.63□□□□□ -0.39
FN1-214ENST00000460217 IQCA1Q86XH1 822 aa12.63□□□□□ -0.39
FN1-214ENST00000460217 ZNF784Q8NCA9 323 aaPredicted RBP12.63□□□□□ -0.39
FN1-214ENST00000460217 TMEM87BQ96K49 555 aa12.63□□□□□ -0.39
FN1-214ENST00000460217 TTC14Q96N46 770 aa12.63□□□□□ -0.39
FN1-214ENST00000460217 AGXT2Q9BYV1 514 aa12.63□□□□□ -0.39
FN1-214ENST00000460217 ALDH8A1Q9H2A2 487 aaPredicted RBP12.63□□□□□ -0.39
FN1-214ENST00000460217 TCP11L1Q9NUJ3 509 aa12.63□□□□□ -0.39
FN1-214ENST00000460217 IGKV6D-41A0A0C4DH26 115 aa12.62□□□□□ -0.39
FN1-214ENST00000460217 PRC1O43663 620 aa12.62□□□□□ -0.39
FN1-214ENST00000460217 ITGBL1O95965 494 aaPredicted RBP12.62□□□□□ -0.39
FN1-214ENST00000460217 TSPY3P0CV98 308 aa12.62□□□□□ -0.39
FN1-214ENST00000460217 TSPY8P0CW00 308 aa12.62□□□□□ -0.39
FN1-214ENST00000460217 AKR1B1P15121 316 aa12.62□□□□□ -0.39
FN1-214ENST00000460217 CAP2P40123 477 aa12.62□□□□□ -0.39
FN1-214ENST00000460217 NOVP48745 357 aa12.62□□□□□ -0.39
FN1-214ENST00000460217 NEK4P51957 841 aa12.62□□□□□ -0.39
FN1-214ENST00000460217 RRP1BQ14684 758 aaKnown RBP12.62□□□□□ -0.39
FN1-214ENST00000460217 SART3Q15020 963 aaKnown RBP12.62□□□□□ -0.39
FN1-214ENST00000460217 MAP3K11Q16584 847 aa12.62□□□□□ -0.39
FN1-214ENST00000460217 ABCB5Q2M3G0 1257 aa12.62□□□□□ -0.39
FN1-214ENST00000460217 CCDC178Q5BJE1 867 aa12.62□□□□□ -0.39
FN1-214ENST00000460217 PPP4R3BQ5MIZ7 849 aa12.62□□□□□ -0.39
FN1-214ENST00000460217 TMEM179Q6ZVK1 233 aa12.62□□□□□ -0.39
FN1-214ENST00000460217 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.62□□□□□ -0.39
FN1-214ENST00000460217 RBM46Q8TBY0 533 aaKnown RBP12.62□□□□□ -0.39
FN1-214ENST00000460217 KLRG1Q96E93 195 aa12.62□□□□□ -0.39
FN1-214ENST00000460217 UBAC1Q9BSL1 405 aa12.62□□□□□ -0.39
FN1-214ENST00000460217 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.62□□□□□ -0.39
FN1-214ENST00000460217 MYH4Q9Y623 1939 aa12.62□□□□□ -0.39
FN1-214ENST00000460217 UNCXA6NJT0 531 aa12.61□□□□□ -0.39
FN1-214ENST00000460217 TRAF5O00463 557 aa12.61□□□□□ -0.39
FN1-214ENST00000460217 USP2O75604 605 aaPredicted RBP12.61□□□□□ -0.39
FN1-214ENST00000460217 ASNSP08243 561 aa12.61□□□□□ -0.39
FN1-214ENST00000460217 CPA1P15085 419 aa12.61□□□□□ -0.39
FN1-214ENST00000460217 FKBP1BP68106 108 aa12.61□□□□□ -0.39
FN1-214ENST00000460217 FAM47AQ5JRC9 791 aa12.61□□□□□ -0.39
FN1-214ENST00000460217 NOL9Q5SY16 702 aaKnown RBP12.61□□□□□ -0.39
FN1-214ENST00000460217 DLK2Q6UY11 383 aa12.61□□□□□ -0.39
FN1-214ENST00000460217 SMC1BQ8NDV3 1235 aa12.61□□□□□ -0.39
FN1-214ENST00000460217 IGDCC4Q8TDY8 1250 aa12.61□□□□□ -0.39
FN1-214ENST00000460217 ANKS1AQ92625 1134 aa12.61□□□□□ -0.39
FN1-214ENST00000460217 WRNIP1Q96S55 665 aa12.61□□□□□ -0.39
FN1-214ENST00000460217 ZSCAN10Q96SZ4 725 aaPredicted RBP12.61□□□□□ -0.39
FN1-214ENST00000460217 TSHZ2Q9NRE2 1034 aa12.61□□□□□ -0.39
FN1-214ENST00000460217 IL17RBQ9NRM6 502 aa12.61□□□□□ -0.39
FN1-214ENST00000460217 PDRG1Q9NUG6 133 aa12.61□□□□□ -0.39
FN1-214ENST00000460217 ZBTB21Q9ULJ3 1066 aa12.61□□□□□ -0.39
FN1-214ENST00000460217 SH2B2O14492 632 aaPredicted RBP12.6□□□□□ -0.39
FN1-214ENST00000460217 ST18O60284 1047 aa12.6□□□□□ -0.39
FN1-214ENST00000460217 TOMM70O94826 608 aa12.6□□□□□ -0.39
FN1-214ENST00000460217 GH2P01242 217 aa12.6□□□□□ -0.39
FN1-214ENST00000460217 LIFRP42702 1097 aa12.6□□□□□ -0.39
FN1-214ENST00000460217 IREB2P48200 963 aaKnown RBP12.6□□□□□ -0.39
FN1-214ENST00000460217 ANKRD1Q15327 319 aa12.6□□□□□ -0.39
FN1-214ENST00000460217 SEC23AQ15436 765 aa12.6□□□□□ -0.39
FN1-214ENST00000460217 CHST3Q7LGC8 479 aa12.6□□□□□ -0.39
FN1-214ENST00000460217 SGMS1Q86VZ5 419 aa12.6□□□□□ -0.39
FN1-214ENST00000460217 DGKHQ86XP1 1220 aa12.6□□□□□ -0.39
FN1-214ENST00000460217 TMTC2Q8N394 836 aa12.6□□□□□ -0.39
FN1-214ENST00000460217 ENAHQ8N8S7 591 aaPredicted RBP12.6□□□□□ -0.39
FN1-214ENST00000460217 TCEANC2Q96MN5 208 aa12.6□□□□□ -0.39
FN1-214ENST00000460217 KANSL2Q9H9L4 492 aa12.6□□□□□ -0.39
FN1-214ENST00000460217 CABP5Q9NP86 173 aa12.6□□□□□ -0.39
FN1-214ENST00000460217 MTMR4Q9NYA4 1195 aa12.6□□□□□ -0.39
FN1-214ENST00000460217 ANGEL1Q9UNK9 670 aaKnown RBP12.6□□□□□ -0.39
FN1-214ENST00000460217 PHIPQ8WWQ0 1821 aa12.6□□□□□ -0.39
FN1-214ENST00000460217 TNKSO95271 1327 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 79 ms