RNA–Protein interactions for RNA: ENST00000458059.7

CNEP1R1-203, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 1 (best) BASIC

Gene CNEP1R1, Length 2,965 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-203ENST00000458059 HOOK1Q9UJC3 728 aaKnown RBP22.35■■□□□ 1.17
CNEP1R1-203ENST00000458059 SPEF2Q9C093 1822 aa22.35■■□□□ 1.17
CNEP1R1-203ENST00000458059 SASH3O75995 380 aa22.35■■□□□ 1.17
CNEP1R1-203ENST00000458059 ZNF654Q8IZM8 581 aa22.35■■□□□ 1.17
CNEP1R1-203ENST00000458059 RAI14Q9P0K7 980 aa22.35■■□□□ 1.17
CNEP1R1-203ENST00000458059 CD44P16070 742 aaKnown RBP22.35■■□□□ 1.17
CNEP1R1-203ENST00000458059 NKX1-1Q15270 411 aaPredicted RBP22.35■■□□□ 1.17
CNEP1R1-203ENST00000458059 ZNF174Q15697 407 aa22.35■■□□□ 1.17
CNEP1R1-203ENST00000458059 TICAM2Q86XR7 235 aa22.35■■□□□ 1.17
CNEP1R1-203ENST00000458059 NEK11Q8NG66 645 aa22.35■■□□□ 1.17
CNEP1R1-203ENST00000458059 SHISA4Q96DD7 197 aa22.35■■□□□ 1.17
CNEP1R1-203ENST00000458059 BLZF1Q9H2G9 400 aa22.35■■□□□ 1.17
CNEP1R1-203ENST00000458059 MAPK8IP1Q9UQF2 711 aa22.35■■□□□ 1.17
CNEP1R1-203ENST00000458059 PDE8AO60658 829 aa22.34■■□□□ 1.17
CNEP1R1-203ENST00000458059 EVX2Q03828 476 aa22.34■■□□□ 1.17
CNEP1R1-203ENST00000458059 SART3Q15020 963 aaKnown RBP22.34■■□□□ 1.17
CNEP1R1-203ENST00000458059 ADGRA1Q86SQ6 560 aa22.34■■□□□ 1.17
CNEP1R1-203ENST00000458059 CRACR2BQ8N4Y2 399 aaPredicted RBP22.34■■□□□ 1.17
CNEP1R1-203ENST00000458059 UQCRFS1P1P0C7P4 283 aa22.34■■□□□ 1.17
CNEP1R1-203ENST00000458059 LIFRP42702 1097 aa22.34■■□□□ 1.17
CNEP1R1-203ENST00000458059 KCNJ6P48051 423 aa22.34■■□□□ 1.17
CNEP1R1-203ENST00000458059 FANCBQ8NB91 859 aa22.34■■□□□ 1.17
CNEP1R1-203ENST00000458059 FAM53CQ9NYF3 392 aa22.34■■□□□ 1.17
CNEP1R1-203ENST00000458059 SLC5A1P13866 664 aa22.33■■□□□ 1.17
CNEP1R1-203ENST00000458059 ARID4AP29374 1257 aaPredicted RBP22.33■■□□□ 1.17
CNEP1R1-203ENST00000458059 CARD10Q9BWT7 1032 aa22.33■■□□□ 1.17
CNEP1R1-203ENST00000458059 AKAP17AQ02040 695 aaKnown RBP22.33■■□□□ 1.16
CNEP1R1-203ENST00000458059 ACTN4O43707 911 aaKnown RBP22.32■■□□□ 1.16
CNEP1R1-203ENST00000458059 CDC25AP30304 524 aa22.32■■□□□ 1.16
CNEP1R1-203ENST00000458059 RBL2Q08999 1139 aa22.32■■□□□ 1.16
CNEP1R1-203ENST00000458059 MORC3Q14149 939 aa22.32■■□□□ 1.16
CNEP1R1-203ENST00000458059 RILPL1Q5EBL4 403 aa22.32■■□□□ 1.16
CNEP1R1-203ENST00000458059 KRT23Q9C075 422 aa22.32■■□□□ 1.16
CNEP1R1-203ENST00000458059 V9GY48 417 aaPredicted RBP22.32■■□□□ 1.16
CNEP1R1-203ENST00000458059 PLEKHA8P1O95397 391 aa22.32■■□□□ 1.16
CNEP1R1-203ENST00000458059 CYP7A1P22680 504 aa22.32■■□□□ 1.16
CNEP1R1-203ENST00000458059 NACAP1Q9BZK3 213 aa22.32■■□□□ 1.16
CNEP1R1-203ENST00000458059 DNAJC5Q9H3Z4 198 aa22.32■■□□□ 1.16
CNEP1R1-203ENST00000458059 ABL1P00519 1130 aa22.32■■□□□ 1.16
CNEP1R1-203ENST00000458059 ZNF18P17022 549 aa22.32■■□□□ 1.16
CNEP1R1-203ENST00000458059 TBX2Q13207 712 aaPredicted RBP22.32■■□□□ 1.16
CNEP1R1-203ENST00000458059 IGSF22Q8N9C0 903 aa22.32■■□□□ 1.16
CNEP1R1-203ENST00000458059 WASF1Q92558 559 aa22.32■■□□□ 1.16
CNEP1R1-203ENST00000458059 TNKSO95271 1327 aa22.31■■□□□ 1.16
CNEP1R1-203ENST00000458059 FAM237AA0A1B0GTK4 181 aa22.31■■□□□ 1.16
CNEP1R1-203ENST00000458059 DEXIO95424 95 aa22.31■■□□□ 1.16
CNEP1R1-203ENST00000458059 ST5P78524 1137 aa22.31■■□□□ 1.16
CNEP1R1-203ENST00000458059 RAD9BQ6WBX8 426 aa22.31■■□□□ 1.16
CNEP1R1-203ENST00000458059 NUTM2AQ8IVF1 878 aaPredicted RBP22.31■■□□□ 1.16
CNEP1R1-203ENST00000458059 SYMPKQ92797 1274 aaKnown RBP22.31■■□□□ 1.16
CNEP1R1-203ENST00000458059 ZNF142P52746 1687 aaPredicted RBP22.31■■□□□ 1.16
CNEP1R1-203ENST00000458059 COL5A2P05997 1499 aaPredicted RBP22.31■■□□□ 1.16
CNEP1R1-203ENST00000458059 EFCAB8A8MWE9 144 aa22.31■■□□□ 1.16
CNEP1R1-203ENST00000458059 MAPK8IP2Q13387 824 aaPredicted RBP22.31■■□□□ 1.16
CNEP1R1-203ENST00000458059 SUSD4Q5VX71 490 aa22.31■■□□□ 1.16
CNEP1R1-203ENST00000458059 MLKLQ8NB16 471 aa22.31■■□□□ 1.16
CNEP1R1-203ENST00000458059 PARD6BQ9BYG5 372 aa22.31■■□□□ 1.16
CNEP1R1-203ENST00000458059 MTMR7Q9Y216 660 aa22.31■■□□□ 1.16
CNEP1R1-203ENST00000458059 CYP19A1P11511 503 aaPredicted RBP22.3■■□□□ 1.16
CNEP1R1-203ENST00000458059 ABCC12Q96J65 1359 aa22.3■■□□□ 1.16
CNEP1R1-203ENST00000458059 ZRANB2O95218 330 aaKnown RBP eCLIP22.3■■□□□ 1.16
CNEP1R1-203ENST00000458059 ENOX1Q8TC92 643 aaKnown RBP22.3■■□□□ 1.16
CNEP1R1-203ENST00000458059 CNNM2Q9H8M5 875 aa22.3■■□□□ 1.16
CNEP1R1-203ENST00000458059 STX10O60499 249 aa22.29■■□□□ 1.16
CNEP1R1-203ENST00000458059 PPARAQ07869 468 aa22.29■■□□□ 1.16
CNEP1R1-203ENST00000458059 PPFIBP1Q86W92 1011 aa22.29■■□□□ 1.16
CNEP1R1-203ENST00000458059 ZFP91Q96JP5 570 aaPredicted RBP22.29■■□□□ 1.16
CNEP1R1-203ENST00000458059 ECM29Q5VYK3 1845 aa22.29■■□□□ 1.16
CNEP1R1-203ENST00000458059 CDHR2Q9BYE9 1310 aa22.29■■□□□ 1.16
CNEP1R1-203ENST00000458059 AKR1B15C9JRZ8 316 aaPredicted RBP22.29■■□□□ 1.16
CNEP1R1-203ENST00000458059 OAS2P29728 719 aaKnown RBP22.29■■□□□ 1.16
CNEP1R1-203ENST00000458059 GYG1P46976 350 aa22.29■■□□□ 1.16
CNEP1R1-203ENST00000458059 DYNLL1P63167 89 aaKnown RBP22.29■■□□□ 1.16
CNEP1R1-203ENST00000458059 ACRBPQ8NEB7 543 aa22.29■■□□□ 1.16
CNEP1R1-203ENST00000458059 CTNND2Q9UQB3 1225 aa22.29■■□□□ 1.16
CNEP1R1-203ENST00000458059 JAG2Q9Y219 1238 aa22.29■■□□□ 1.16
CNEP1R1-203ENST00000458059 MRFAP1Q9Y605 127 aa22.29■■□□□ 1.16
CNEP1R1-203ENST00000458059 SYNRGQ9UMZ2 1314 aa22.29■■□□□ 1.16
CNEP1R1-203ENST00000458059 TRIM75PA6NK02 468 aa22.29■■□□□ 1.16
CNEP1R1-203ENST00000458059 CASP14P31944 242 aa22.29■■□□□ 1.16
CNEP1R1-203ENST00000458059 KIFC2Q96AC6 838 aa22.29■■□□□ 1.16
CNEP1R1-203ENST00000458059 EEF2KMTQ96G04 330 aa22.29■■□□□ 1.16
CNEP1R1-203ENST00000458059 FOXP1Q9H334 677 aaPredicted RBP22.29■■□□□ 1.16
CNEP1R1-203ENST00000458059 RNF216Q9NWF9 866 aaPredicted RBP22.29■■□□□ 1.16
CNEP1R1-203ENST00000458059 BTG4Q9NY30 223 aa22.29■■□□□ 1.16
CNEP1R1-203ENST00000458059 SRPRBQ9Y5M8 271 aaKnown RBP22.29■■□□□ 1.16
CNEP1R1-203ENST00000458059 PES1O00541 588 aaKnown RBP22.28■■□□□ 1.16
CNEP1R1-203ENST00000458059 NMT2O60551 498 aa22.28■■□□□ 1.16
CNEP1R1-203ENST00000458059 TBC1D8O95759 1140 aa22.28■■□□□ 1.16
CNEP1R1-203ENST00000458059 FGFR2P21802 821 aa22.28■■□□□ 1.16
CNEP1R1-203ENST00000458059 PLCD1P51178 756 aa22.28■■□□□ 1.16
CNEP1R1-203ENST00000458059 MAP3K9P80192 1104 aa22.28■■□□□ 1.16
CNEP1R1-203ENST00000458059 ZNF569Q5MCW4 686 aa22.28■■□□□ 1.16
CNEP1R1-203ENST00000458059 CC2D1AQ6P1N0 951 aaPredicted RBP22.28■■□□□ 1.16
CNEP1R1-203ENST00000458059 VPS16Q9H269 839 aa22.28■■□□□ 1.16
CNEP1R1-203ENST00000458059 SARSP49591 514 aaKnown RBP22.28■■□□□ 1.16
CNEP1R1-203ENST00000458059 DPYDQ12882 1025 aa22.28■■□□□ 1.16
CNEP1R1-203ENST00000458059 DHX8Q14562 1220 aaKnown RBP22.28■■□□□ 1.16
CNEP1R1-203ENST00000458059 NR1I3Q14994 352 aa22.28■■□□□ 1.16
CNEP1R1-203ENST00000458059 DACH1Q9UI36 760 aa22.28■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms