RNA–Protein interactions for RNA: ENST00000454583.6

RIF1-207, Transcript of replication timing regulatory factor 1, humanhuman

TSL 2

Gene RIF1, Length 3,552 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-207ENST00000454583 CNTNAP5Q8WYK1 1306 aa5.93□□□□□ -1.46
RIF1-207ENST00000454583 DNAH12Q6ZR08 3092 aa5.93□□□□□ -1.46
RIF1-207ENST00000454583 REV3LO60673 3130 aa5.93□□□□□ -1.46
RIF1-207ENST00000454583 MCM3APO60318 1980 aa5.93□□□□□ -1.46
RIF1-207ENST00000454583 FRAT2O75474 233 aaPredicted RBP5.93□□□□□ -1.46
RIF1-207ENST00000454583 LDHBP07195 334 aaKnown RBP5.93□□□□□ -1.46
RIF1-207ENST00000454583 SMARCA1P28370 1054 aa5.93□□□□□ -1.46
RIF1-207ENST00000454583 SCRN1Q12765 414 aa5.93□□□□□ -1.46
RIF1-207ENST00000454583 CFAP100Q494V2 611 aa5.93□□□□□ -1.46
RIF1-207ENST00000454583 AKNAD1Q5T1N1 836 aa5.93□□□□□ -1.46
RIF1-207ENST00000454583 NEDD1Q8NHV4 660 aa5.93□□□□□ -1.46
RIF1-207ENST00000454583 FAM212AQ96EL1 285 aa5.93□□□□□ -1.46
RIF1-207ENST00000454583 ZNF274Q96GC6 653 aaPredicted RBP5.93□□□□□ -1.46
RIF1-207ENST00000454583 NEUROD6Q96NK8 337 aa5.93□□□□□ -1.46
RIF1-207ENST00000454583 IQSEC3Q9UPP2 1182 aaPredicted RBP5.93□□□□□ -1.46
RIF1-207ENST00000454583 USP2O75604 605 aaPredicted RBP5.92□□□□□ -1.46
RIF1-207ENST00000454583 CPA1P15085 419 aa5.92□□□□□ -1.46
RIF1-207ENST00000454583 PDIA3P30101 505 aaKnown RBP5.92□□□□□ -1.46
RIF1-207ENST00000454583 RABEP1Q15276 862 aa5.92□□□□□ -1.46
RIF1-207ENST00000454583 ZSCAN25Q6NSZ9 544 aa5.92□□□□□ -1.46
RIF1-207ENST00000454583 RASGRP2Q7LDG7 609 aa5.92□□□□□ -1.46
RIF1-207ENST00000454583 ZNF579Q8NAF0 562 aaKnown RBP5.92□□□□□ -1.46
RIF1-207ENST00000454583 ZC3H15Q8WU90 426 aaKnown RBP5.92□□□□□ -1.46
RIF1-207ENST00000454583 GTF3C6Q969F1 213 aa5.92□□□□□ -1.46
RIF1-207ENST00000454583 GPATCH3Q96I76 525 aa5.92□□□□□ -1.46
RIF1-207ENST00000454583 DNAJC2Q99543 621 aaKnown RBP5.92□□□□□ -1.46
RIF1-207ENST00000454583 AATFQ9NY61 560 aaKnown RBP eCLIP5.92□□□□□ -1.46
RIF1-207ENST00000454583 SPTBN5Q9NRC6 3674 aaKnown RBP5.92□□□□□ -1.46
RIF1-207ENST00000454583 CNMDO75829 334 aa5.92□□□□□ -1.46
RIF1-207ENST00000454583 EPS15P42566 896 aa5.92□□□□□ -1.46
RIF1-207ENST00000454583 CST9Q5W186 159 aa5.92□□□□□ -1.46
RIF1-207ENST00000454583 SPTY2D1Q68D10 685 aaPredicted RBP5.92□□□□□ -1.46
RIF1-207ENST00000454583 ZNF622Q969S3 477 aaKnown RBP eCLIP5.92□□□□□ -1.461e-7■□□□□ 11.1
RIF1-207ENST00000454583 FSD1Q9BTV5 496 aa5.92□□□□□ -1.46
RIF1-207ENST00000454583 CFHR5Q9BXR6 569 aa5.92□□□□□ -1.46
RIF1-207ENST00000454583 CHMP3Q9Y3E7 222 aa5.92□□□□□ -1.46
RIF1-207ENST00000454583 RIOK3O14730 519 aaKnown RBP5.92□□□□□ -1.46
RIF1-207ENST00000454583 RIMBP2O15034 1052 aa5.92□□□□□ -1.46
RIF1-207ENST00000454583 PPIP5K2O43314 1243 aa5.92□□□□□ -1.46
RIF1-207ENST00000454583 BRD1O95696 1058 aa5.92□□□□□ -1.46
RIF1-207ENST00000454583 POTEIP0CG38 1075 aa5.92□□□□□ -1.46
RIF1-207ENST00000454583 POTEJP0CG39 1038 aa5.92□□□□□ -1.46
RIF1-207ENST00000454583 CTDSPL2Q05D32 466 aa5.92□□□□□ -1.46
RIF1-207ENST00000454583 MAP3K12Q12852 859 aa5.92□□□□□ -1.46
RIF1-207ENST00000454583 USP50Q70EL3 339 aaPredicted RBP5.92□□□□□ -1.46
RIF1-207ENST00000454583 TAF1DQ9H5J8 278 aaPredicted RBP5.92□□□□□ -1.46
RIF1-207ENST00000454583 RIOX1Q9H6W3 641 aa5.92□□□□□ -1.46
RIF1-207ENST00000454583 SNCAIPQ9Y6H5 919 aa5.92□□□□□ -1.46
RIF1-207ENST00000454583 UBE2Q2LH0YL09 131 aa5.91□□□□□ -1.46
RIF1-207ENST00000454583 VEGFAP15692 232 aaPredicted RBP5.91□□□□□ -1.46
RIF1-207ENST00000454583 CYP7A1P22680 504 aa5.91□□□□□ -1.46
RIF1-207ENST00000454583 CAP1Q01518 475 aa5.91□□□□□ -1.46
RIF1-207ENST00000454583 PKP1Q13835 747 aa5.91□□□□□ -1.46
RIF1-207ENST00000454583 NAA16Q6N069 864 aaPredicted RBP5.91□□□□□ -1.46
RIF1-207ENST00000454583 GPAT2Q6NUI2 795 aa5.91□□□□□ -1.46
RIF1-207ENST00000454583 NSUN7Q8NE18 718 aaKnown RBP5.91□□□□□ -1.46
RIF1-207ENST00000454583 KCNH4Q9UQ05 1017 aa5.91□□□□□ -1.46
RIF1-207ENST00000454583 KIAA1671Q9BY89 1806 aa5.91□□□□□ -1.46
RIF1-207ENST00000454583 ASTN1O14525 1302 aa5.91□□□□□ -1.46
RIF1-207ENST00000454583 CDK8P49336 464 aa5.91□□□□□ -1.46
RIF1-207ENST00000454583 GSTO1P78417 241 aa5.91□□□□□ -1.46
RIF1-207ENST00000454583 CIAPIN1Q6FI81 312 aa5.91□□□□□ -1.46
RIF1-207ENST00000454583 DHX32Q7L7V1 743 aaKnown RBP5.91□□□□□ -1.46
RIF1-207ENST00000454583 KLRG1Q96E93 195 aa5.91□□□□□ -1.46
RIF1-207ENST00000454583 MS4A4AQ96JQ5 239 aa5.91□□□□□ -1.46
RIF1-207ENST00000454583 AFG3L2Q9Y4W6 797 aa5.91□□□□□ -1.46
RIF1-207ENST00000454583 TSC2P49815 1807 aa5.91□□□□□ -1.46
RIF1-207ENST00000454583 NMT2O60551 498 aa5.91□□□□□ -1.46
RIF1-207ENST00000454583 C9orf131Q5VYM1 1079 aa5.91□□□□□ -1.46
RIF1-207ENST00000454583 TYW1BQ6NUM6 668 aa5.91□□□□□ -1.46
RIF1-207ENST00000454583 PPP1R3FQ6ZSY5 799 aaPredicted RBP5.91□□□□□ -1.46
RIF1-207ENST00000454583 MIGA1Q8NAN2 632 aa5.91□□□□□ -1.46
RIF1-207ENST00000454583 TNPO1Q92973 898 aaKnown RBP5.91□□□□□ -1.46
RIF1-207ENST00000454583 DYNLL2Q96FJ2 89 aa5.91□□□□□ -1.46
RIF1-207ENST00000454583 FGD4Q96M96 766 aa5.91□□□□□ -1.46
RIF1-207ENST00000454583 GINM1Q9NU53 330 aa5.91□□□□□ -1.46
RIF1-207ENST00000454583 TTF2Q9UNY4 1162 aaKnown RBP5.91□□□□□ -1.46
RIF1-207ENST00000454583 PRKCSHP14314 528 aaPredicted RBP5.9□□□□□ -1.46
RIF1-207ENST00000454583 GRM4Q14833 912 aa5.9□□□□□ -1.46
RIF1-207ENST00000454583 DLK2Q6UY11 383 aa5.9□□□□□ -1.46
RIF1-207ENST00000454583 MICALL2Q8IY33 904 aa5.9□□□□□ -1.46
RIF1-207ENST00000454583 SLC44A5Q8NCS7 719 aa5.9□□□□□ -1.46
RIF1-207ENST00000454583 MBOAT7Q96N66 472 aa5.9□□□□□ -1.46
RIF1-207ENST00000454583 WDR18Q9BV38 432 aa5.9□□□□□ -1.46
RIF1-207ENST00000454583 ZC3H12CQ9C0D7 883 aaKnown RBP5.9□□□□□ -1.46
RIF1-207ENST00000454583 DDX24Q9GZR7 859 aaKnown RBP eCLIP5.9□□□□□ -1.46
RIF1-207ENST00000454583 MTMR4Q9NYA4 1195 aa5.9□□□□□ -1.46
RIF1-207ENST00000454583 HACL1Q9UJ83 578 aa5.9□□□□□ -1.46
RIF1-207ENST00000454583 JAG2Q9Y219 1238 aa5.9□□□□□ -1.46
RIF1-207ENST00000454583 RPTORQ8N122 1335 aa5.9□□□□□ -1.47
RIF1-207ENST00000454583 CEP350Q5VT06 3117 aa5.9□□□□□ -1.47
RIF1-207ENST00000454583 FAM237AA0A1B0GTK4 181 aa5.9□□□□□ -1.47
RIF1-207ENST00000454583 DDNO94850 711 aaPredicted RBP5.9□□□□□ -1.47
RIF1-207ENST00000454583 REC8O95072 547 aa5.9□□□□□ -1.47
RIF1-207ENST00000454583 MCM4P33991 863 aa5.9□□□□□ -1.47
RIF1-207ENST00000454583 MFAP1P55081 439 aaKnown RBP5.9□□□□□ -1.47
RIF1-207ENST00000454583 MCCD1P59942 119 aaPredicted RBP5.9□□□□□ -1.47
RIF1-207ENST00000454583 DGKHQ86XP1 1220 aa5.9□□□□□ -1.47
RIF1-207ENST00000454583 PIP4P2Q8N4L2 257 aa5.9□□□□□ -1.47
RIF1-207ENST00000454583 C4orf32Q8N8J7 132 aa5.9□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms