RNA–Protein interactions for RNA: ENST00000448494.1

LINC00342-202, long intergenic non-protein coding RNA 342, humanhuman

TSL 2 BASIC

Gene LINC00342, Length 2,351 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00342-202ENST00000448494 AOX1Q06278 1338 aa12.04□□□□□ -0.48
LINC00342-202ENST00000448494 DNM1LO00429 736 aa12.04□□□□□ -0.48
LINC00342-202ENST00000448494 PPP1R37O75864 691 aa12.04□□□□□ -0.48
LINC00342-202ENST00000448494 AKAP17AQ02040 695 aaKnown RBP12.04□□□□□ -0.48
LINC00342-202ENST00000448494 PABPC1LQ4VXU2 614 aaKnown RBP12.04□□□□□ -0.48
LINC00342-202ENST00000448494 ALS2CLQ60I27 953 aa12.04□□□□□ -0.48
LINC00342-202ENST00000448494 UBE3BQ7Z3V4 1068 aa12.04□□□□□ -0.48
LINC00342-202ENST00000448494 RNF168Q8IYW5 571 aaPredicted RBP12.04□□□□□ -0.48
LINC00342-202ENST00000448494 SYCP3Q8IZU3 236 aa12.04□□□□□ -0.48
LINC00342-202ENST00000448494 NAPGQ99747 312 aaPredicted RBP12.04□□□□□ -0.48
LINC00342-202ENST00000448494 OSBPL1AQ9BXW6 950 aa12.04□□□□□ -0.48
LINC00342-202ENST00000448494 MRPL44Q9H9J2 332 aaKnown RBP12.04□□□□□ -0.48
LINC00342-202ENST00000448494 MIS18AQ9NYP9 233 aa12.04□□□□□ -0.48
LINC00342-202ENST00000448494 BAIAP2L1Q9UHR4 511 aa12.04□□□□□ -0.48
LINC00342-202ENST00000448494 SETD1AO15047 1707 aaKnown RBP12.04□□□□□ -0.48
LINC00342-202ENST00000448494 DUOX2Q9NRD8 1548 aa12.04□□□□□ -0.48
LINC00342-202ENST00000448494 ATP10BO94823 1461 aa12.04□□□□□ -0.48
LINC00342-202ENST00000448494 A0A1B0GVG6 124 aa12.04□□□□□ -0.48
LINC00342-202ENST00000448494 NUTM2FA1L443 756 aa12.04□□□□□ -0.48
LINC00342-202ENST00000448494 ZNF189O75820 626 aaPredicted RBP12.04□□□□□ -0.48
LINC00342-202ENST00000448494 CSB-PGBD3P0DP91 1061 aa12.04□□□□□ -0.48
LINC00342-202ENST00000448494 VCAM1P19320 739 aa12.04□□□□□ -0.48
LINC00342-202ENST00000448494 YY1P25490 414 aa12.04□□□□□ -0.48
LINC00342-202ENST00000448494 HDGFP51858 240 aaKnown RBP12.04□□□□□ -0.48
LINC00342-202ENST00000448494 INHBCP55103 352 aa12.04□□□□□ -0.48
LINC00342-202ENST00000448494 ENOX2Q16206 610 aaKnown RBP12.04□□□□□ -0.48
LINC00342-202ENST00000448494 DPCR1Q3MIW9 517 aa12.04□□□□□ -0.48
LINC00342-202ENST00000448494 EHBP1Q8NDI1 1231 aa12.04□□□□□ -0.48
LINC00342-202ENST00000448494 RPGRIP1Q96KN7 1286 aa12.04□□□□□ -0.48
LINC00342-202ENST00000448494 OSBPL7Q9BZF2 842 aa12.04□□□□□ -0.48
LINC00342-202ENST00000448494 RCOR1Q9UKL0 485 aa12.04□□□□□ -0.48
LINC00342-202ENST00000448494 SYNPO2Q9UMS6 1093 aa12.04□□□□□ -0.48
LINC00342-202ENST00000448494 NEO1Q92859 1461 aa12.03□□□□□ -0.48
LINC00342-202ENST00000448494 KDM6AO15550 1401 aaPredicted RBP12.03□□□□□ -0.48
LINC00342-202ENST00000448494 NSD3Q9BZ95 1437 aa12.03□□□□□ -0.48
LINC00342-202ENST00000448494 F8VZ95 297 aa12.03□□□□□ -0.48
LINC00342-202ENST00000448494 OPLAHO14841 1288 aa12.03□□□□□ -0.48
LINC00342-202ENST00000448494 CYP11B2P19099 503 aa12.03□□□□□ -0.48
LINC00342-202ENST00000448494 PSMC4P43686 418 aa12.03□□□□□ -0.48
LINC00342-202ENST00000448494 CCNG1P51959 295 aa12.03□□□□□ -0.48
LINC00342-202ENST00000448494 NLRP12P59046 1061 aa12.03□□□□□ -0.48
LINC00342-202ENST00000448494 MXRA7P84157 204 aa12.03□□□□□ -0.48
LINC00342-202ENST00000448494 HDLBPQ00341 1268 aaKnown RBP12.03□□□□□ -0.48
LINC00342-202ENST00000448494 PRPF4BQ13523 1007 aaKnown RBP12.03□□□□□ -0.48
LINC00342-202ENST00000448494 LBRQ14739 615 aaKnown RBP12.03□□□□□ -0.48
LINC00342-202ENST00000448494 SGSM1Q2NKQ1 1148 aa12.03□□□□□ -0.48
LINC00342-202ENST00000448494 SLC4A8Q2Y0W8 1093 aa12.03□□□□□ -0.48
LINC00342-202ENST00000448494 SMYD1Q8NB12 490 aa12.03□□□□□ -0.48
LINC00342-202ENST00000448494 RUBCNQ92622 972 aa12.03□□□□□ -0.48
LINC00342-202ENST00000448494 GOLPH3LQ9H4A5 285 aa12.03□□□□□ -0.48
LINC00342-202ENST00000448494 TRPV5Q9NQA5 729 aa12.03□□□□□ -0.48
LINC00342-202ENST00000448494 ATXN10Q9UBB4 475 aa12.03□□□□□ -0.48
LINC00342-202ENST00000448494 STAP2Q9UGK3 403 aa12.03□□□□□ -0.48
LINC00342-202ENST00000448494 FAM184BQ9ULE4 1060 aa12.03□□□□□ -0.48
LINC00342-202ENST00000448494 MAPK8IP1Q9UQF2 711 aa12.03□□□□□ -0.48
LINC00342-202ENST00000448494 SYNRGQ9UMZ2 1314 aa12.03□□□□□ -0.48
LINC00342-202ENST00000448494 SERPINC1P01008 464 aa12.03□□□□□ -0.48
LINC00342-202ENST00000448494 KIF5BP33176 963 aa12.03□□□□□ -0.48
LINC00342-202ENST00000448494 RESTQ13127 1097 aa12.03□□□□□ -0.48
LINC00342-202ENST00000448494 TSNAXIP1Q2TAA8 658 aa12.03□□□□□ -0.48
LINC00342-202ENST00000448494 CFAP100Q494V2 611 aa12.03□□□□□ -0.48
LINC00342-202ENST00000448494 ZNF569Q5MCW4 686 aa12.03□□□□□ -0.48
LINC00342-202ENST00000448494 CCNI2Q6ZMN8 369 aaPredicted RBP12.03□□□□□ -0.48
LINC00342-202ENST00000448494 SMCR8Q8TEV9 937 aaPredicted RBP12.03□□□□□ -0.48
LINC00342-202ENST00000448494 MAIP1Q8WWC4 291 aa12.03□□□□□ -0.48
LINC00342-202ENST00000448494 TEKT1Q969V4 418 aa12.03□□□□□ -0.48
LINC00342-202ENST00000448494 RILPL2Q969X0 211 aa12.03□□□□□ -0.48
LINC00342-202ENST00000448494 ZSWIM6Q9HCJ5 1215 aa12.03□□□□□ -0.48
LINC00342-202ENST00000448494 KIAA1468Q9P260 1216 aa12.03□□□□□ -0.48
LINC00342-202ENST00000448494 TMCO1Q9UM00 188 aa12.03□□□□□ -0.48
LINC00342-202ENST00000448494 C2CD2Q9Y426 696 aa12.03□□□□□ -0.48
LINC00342-202ENST00000448494 TMEM221A6NGB7 291 aa12.02□□□□□ -0.49
LINC00342-202ENST00000448494 APBB1O00213 710 aa12.02□□□□□ -0.49
LINC00342-202ENST00000448494 VIL1P09327 827 aaKnown RBP12.02□□□□□ -0.49
LINC00342-202ENST00000448494 KIAA0753Q2KHM9 967 aa12.02□□□□□ -0.49
LINC00342-202ENST00000448494 KBTBD12Q3ZCT8 623 aa12.02□□□□□ -0.49
LINC00342-202ENST00000448494 RASEFQ8IZ41 740 aa12.02□□□□□ -0.49
LINC00342-202ENST00000448494 PHC3Q8NDX5 983 aa12.02□□□□□ -0.49
LINC00342-202ENST00000448494 SLC35B4Q969S0 331 aa12.02□□□□□ -0.49
LINC00342-202ENST00000448494 JAKMIP2Q96AA8 810 aa12.02□□□□□ -0.49
LINC00342-202ENST00000448494 RUFY1Q96T51 708 aa12.02□□□□□ -0.49
LINC00342-202ENST00000448494 UBE2OQ9C0C9 1292 aaKnown RBP12.02□□□□□ -0.49
LINC00342-202ENST00000448494 PCMTD2Q9NV79 361 aa12.02□□□□□ -0.49
LINC00342-202ENST00000448494 HDAC6Q9UBN7 1215 aa12.02□□□□□ -0.49
LINC00342-202ENST00000448494 CYP46A1Q9Y6A2 500 aa12.02□□□□□ -0.49
LINC00342-202ENST00000448494 UBN2Q6ZU65 1347 aa12.02□□□□□ -0.49
LINC00342-202ENST00000448494 A0A087WWV3 80 aa12.01□□□□□ -0.49
LINC00342-202ENST00000448494 ALADP13716 330 aa12.01□□□□□ -0.49
LINC00342-202ENST00000448494 ABL2P42684 1182 aa12.01□□□□□ -0.49
LINC00342-202ENST00000448494 MRPS35P82673 323 aaKnown RBP12.01□□□□□ -0.49
LINC00342-202ENST00000448494 ATL3Q6DD88 541 aa12.01□□□□□ -0.49
LINC00342-202ENST00000448494 OGFOD1Q8N543 542 aa12.01□□□□□ -0.49
LINC00342-202ENST00000448494 TC2NQ8N9U0 490 aa12.01□□□□□ -0.49
LINC00342-202ENST00000448494 AENQ8WTP8 325 aaKnown RBP12.01□□□□□ -0.49
LINC00342-202ENST00000448494 CYFIP2Q96F07 1278 aa12.01□□□□□ -0.49
LINC00342-202ENST00000448494 LSG1Q9H089 658 aaKnown RBP12.01□□□□□ -0.49
LINC00342-202ENST00000448494 SWAP70Q9UH65 585 aa12.01□□□□□ -0.49
LINC00342-202ENST00000448494 DPPA5A6NC42 116 aa12.01□□□□□ -0.49
LINC00342-202ENST00000448494 LMOD1P29536 600 aaPredicted RBP12.01□□□□□ -0.49
LINC00342-202ENST00000448494 AMPD2Q01433 879 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 141.9 ms