RNA–Protein interactions for RNA: ENST00000447480.5

TRIM4-204, Transcript of tripartite motif containing 4, humanhuman

TSL 3

Gene TRIM4, Length 639 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-204ENST00000447480 SPC24Q8NBT2 197 aa8.77□□□□□ -1.01
TRIM4-204ENST00000447480 TTLL11Q8NHH1 800 aa8.77□□□□□ -1.01
TRIM4-204ENST00000447480 ZNF622Q969S3 477 aaKnown RBP eCLIP8.77□□□□□ -1.013e-11■■■■□ 20.1
TRIM4-204ENST00000447480 CCDC102AQ96A19 550 aa8.77□□□□□ -1.01
TRIM4-204ENST00000447480 C16orf45Q96MC5 204 aaPredicted RBP8.77□□□□□ -1.01
TRIM4-204ENST00000447480 EYA3Q99504 573 aa8.77□□□□□ -1.01
TRIM4-204ENST00000447480 UBXN6Q9BZV1 441 aa8.77□□□□□ -1.01
TRIM4-204ENST00000447480 BICC1Q9H694 974 aaKnown RBP8.77□□□□□ -1.01
TRIM4-204ENST00000447480 BSDC1Q9NW68 430 aaPredicted RBP8.77□□□□□ -1.01
TRIM4-204ENST00000447480 EXOC6BQ9Y2D4 811 aa8.77□□□□□ -1.01
TRIM4-204ENST00000447480 AKAP2Q9Y2D5 859 aa8.77□□□□□ -1.01
TRIM4-204ENST00000447480 LRRFIP2Q9Y608 721 aaKnown RBP8.77□□□□□ -1.01
TRIM4-204ENST00000447480 ZSCAN12O43309 604 aa8.76□□□□□ -1.01
TRIM4-204ENST00000447480 CBFA2T2O43439 604 aa8.76□□□□□ -1.01
TRIM4-204ENST00000447480 SURF6O75683 361 aaKnown RBP8.76□□□□□ -1.01
TRIM4-204ENST00000447480 ZMYND10O75800 440 aa8.76□□□□□ -1.01
TRIM4-204ENST00000447480 ZRANB2O95218 330 aaKnown RBP eCLIP8.76□□□□□ -1.01
TRIM4-204ENST00000447480 ITGBL1O95965 494 aaPredicted RBP8.76□□□□□ -1.01
TRIM4-204ENST00000447480 SLC10A3P09131 477 aa8.76□□□□□ -1.01
TRIM4-204ENST00000447480 ITGA6P23229 1130 aa8.76□□□□□ -1.01
TRIM4-204ENST00000447480 IL15P40933 162 aaPredicted RBP8.76□□□□□ -1.01
TRIM4-204ENST00000447480 CASP7P55210 303 aa8.76□□□□□ -1.01
TRIM4-204ENST00000447480 NOM1Q5C9Z4 860 aaKnown RBP8.76□□□□□ -1.01
TRIM4-204ENST00000447480 CCDC158Q5M9N0 1113 aa8.76□□□□□ -1.01
TRIM4-204ENST00000447480 BLOC1S2Q6QNY1 142 aa8.76□□□□□ -1.01
TRIM4-204ENST00000447480 TMCO3Q6UWJ1 677 aa8.76□□□□□ -1.01
TRIM4-204ENST00000447480 LDHAL6AQ6ZMR3 332 aa8.76□□□□□ -1.01
TRIM4-204ENST00000447480 LUZP1Q86V48 1076 aa8.76□□□□□ -1.01
TRIM4-204ENST00000447480 ELOA2Q8IYF1 753 aaPredicted RBP8.76□□□□□ -1.01
TRIM4-204ENST00000447480 C17orf53Q8N3J3 647 aaPredicted RBP8.76□□□□□ -1.01
TRIM4-204ENST00000447480 FBXL16Q8N461 479 aa8.76□□□□□ -1.01
TRIM4-204ENST00000447480 TSC1Q92574 1164 aa8.76□□□□□ -1.01
TRIM4-204ENST00000447480 EXOC4Q96A65 974 aa8.76□□□□□ -1.01
TRIM4-204ENST00000447480 JAKMIP1Q96N16 626 aaKnown RBP8.76□□□□□ -1.01
TRIM4-204ENST00000447480 COPRSQ9NQ92 184 aa8.76□□□□□ -1.01
TRIM4-204ENST00000447480 CNNM1Q9NRU3 951 aa8.76□□□□□ -1.01
TRIM4-204ENST00000447480 ZNF215Q9UL58 517 aaPredicted RBP8.76□□□□□ -1.01
TRIM4-204ENST00000447480 BRCA1P38398 1863 aaKnown RBP8.76□□□□□ -1.01
TRIM4-204ENST00000447480 ABCC12Q96J65 1359 aa8.75□□□□□ -1.01
TRIM4-204ENST00000447480 CACNA1SQ13698 1873 aa8.75□□□□□ -1.01
TRIM4-204ENST00000447480 PNMA6EA0A0J9YXQ4 647 aa8.75□□□□□ -1.01
TRIM4-204ENST00000447480 VPS37CA5D8V6 355 aaPredicted RBP8.75□□□□□ -1.01
TRIM4-204ENST00000447480 PPEF1O14829 653 aaPredicted RBP8.75□□□□□ -1.01
TRIM4-204ENST00000447480 IKBKBO14920 756 aa8.75□□□□□ -1.01
TRIM4-204ENST00000447480 IGSF3O75054 1194 aa8.75□□□□□ -1.01
TRIM4-204ENST00000447480 IVLP07476 585 aa8.75□□□□□ -1.01
TRIM4-204ENST00000447480 RPS6KB1P23443 525 aa8.75□□□□□ -1.01
TRIM4-204ENST00000447480 ETF1P62495 437 aaKnown RBP8.75□□□□□ -1.01
TRIM4-204ENST00000447480 FOXO4P98177 505 aa8.75□□□□□ -1.01
TRIM4-204ENST00000447480 FAM160A1Q05DH4 1040 aa8.75□□□□□ -1.01
TRIM4-204ENST00000447480 SNW1Q13573 536 aaKnown RBP8.75□□□□□ -1.01
TRIM4-204ENST00000447480 ME3Q16798 604 aa8.75□□□□□ -1.01
TRIM4-204ENST00000447480 LRRFIP1Q32MZ4 808 aaKnown RBP8.75□□□□□ -1.01
TRIM4-204ENST00000447480 CCDC73Q6ZRK6 1079 aa8.75□□□□□ -1.01
TRIM4-204ENST00000447480 SMIM5Q71RC9 77 aa8.75□□□□□ -1.01
TRIM4-204ENST00000447480 CCDC83Q8IWF9 413 aa8.75□□□□□ -1.01
TRIM4-204ENST00000447480 SP8Q8IXZ3 490 aa8.75□□□□□ -1.01
TRIM4-204ENST00000447480 GPR161Q8N6U8 529 aaKnown RBP8.75□□□□□ -1.01
TRIM4-204ENST00000447480 GOLGA6L1Q8N7Z2 621 aa8.75□□□□□ -1.01
TRIM4-204ENST00000447480 KRI1Q8N9T8 703 aaKnown RBP8.75□□□□□ -1.01
TRIM4-204ENST00000447480 UBXN4Q92575 508 aa8.75□□□□□ -1.01
TRIM4-204ENST00000447480 SUCLG2Q96I99 432 aa8.75□□□□□ -1.01
TRIM4-204ENST00000447480 ZKSCAN7Q9P0L1 754 aaPredicted RBP8.75□□□□□ -1.01
TRIM4-204ENST00000447480 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP8.75□□□□□ -1.012e-6■■■■■ 26.8
TRIM4-204ENST00000447480 CCDC69A6NI79 296 aa8.74□□□□□ -1.01
TRIM4-204ENST00000447480 APBB1O00213 710 aa8.74□□□□□ -1.01
TRIM4-204ENST00000447480 KINO60870 393 aaKnown RBP8.74□□□□□ -1.01
TRIM4-204ENST00000447480 RPS6KA5O75582 802 aa8.74□□□□□ -1.01
TRIM4-204ENST00000447480 CFHP08603 1231 aa8.74□□□□□ -1.01
TRIM4-204ENST00000447480 LIG1P18858 919 aa8.74□□□□□ -1.01
TRIM4-204ENST00000447480 ATP2B4P23634 1241 aa8.74□□□□□ -1.01
TRIM4-204ENST00000447480 CCZ1BP86790 482 aa8.74□□□□□ -1.01
TRIM4-204ENST00000447480 CCZ1P86791 482 aaPredicted RBP8.74□□□□□ -1.01
TRIM4-204ENST00000447480 ZRSR1Q15695 479 aaKnown RBP8.74□□□□□ -1.01
TRIM4-204ENST00000447480 CT47A1Q5JQC4 288 aaPredicted RBP8.74□□□□□ -1.01
TRIM4-204ENST00000447480 CREB3L3Q68CJ9 461 aa8.74□□□□□ -1.01
TRIM4-204ENST00000447480 FBXO38Q6PIJ6 1188 aa8.74□□□□□ -1.01
TRIM4-204ENST00000447480 HNRNPLLQ8WVV9 542 aaKnown RBP8.74□□□□□ -1.01
TRIM4-204ENST00000447480 CHAMP1Q96JM3 812 aa8.74□□□□□ -1.01
TRIM4-204ENST00000447480 SYT17Q9BSW7 474 aa8.74□□□□□ -1.01
TRIM4-204ENST00000447480 FHDC1Q9C0D6 1143 aaPredicted RBP8.74□□□□□ -1.01
TRIM4-204ENST00000447480 PDGFDQ9GZP0 370 aaPredicted RBP8.74□□□□□ -1.01
TRIM4-204ENST00000447480 CEP126Q9P2H0 1117 aa8.74□□□□□ -1.01
TRIM4-204ENST00000447480 DNAI1Q9UI46 699 aa8.74□□□□□ -1.01
TRIM4-204ENST00000447480 LEMD3Q9Y2U8 911 aa8.74□□□□□ -1.01
TRIM4-204ENST00000447480 ATP6V0A2Q9Y487 856 aa8.74□□□□□ -1.01
TRIM4-204ENST00000447480 FHOD1Q9Y613 1164 aa8.74□□□□□ -1.01
TRIM4-204ENST00000447480 TNRC6CQ9HCJ0 1690 aaKnown RBP8.74□□□□□ -1.01
TRIM4-204ENST00000447480 XDHP47989 1333 aa8.74□□□□□ -1.01
TRIM4-204ENST00000447480 COL11A2P13942 1736 aaPredicted RBP8.74□□□□□ -1.01
TRIM4-204ENST00000447480 A0A0U1RQG5 324 aaPredicted RBP8.73□□□□□ -1.01
TRIM4-204ENST00000447480 EYA2O00167 538 aa8.73□□□□□ -1.01
TRIM4-204ENST00000447480 IFIT1P09914 478 aaKnown RBP8.73□□□□□ -1.01
TRIM4-204ENST00000447480 DPEP1P16444 411 aa8.73□□□□□ -1.01
TRIM4-204ENST00000447480 MMP14P50281 582 aa8.73□□□□□ -1.01
TRIM4-204ENST00000447480 RESTQ13127 1097 aa8.73□□□□□ -1.01
TRIM4-204ENST00000447480 BRD3Q15059 726 aa8.73□□□□□ -1.01
TRIM4-204ENST00000447480 TJAP1Q5JTD0 557 aa8.73□□□□□ -1.01
TRIM4-204ENST00000447480 PRPF40BQ6NWY9 871 aaKnown RBP8.73□□□□□ -1.01
TRIM4-204ENST00000447480 SMARCC2Q8TAQ2 1214 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms