RNA–Protein interactions for RNA: ENST00000446852.5

SMC6-206, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 1 (best)

Gene SMC6, Length 2,460 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-206ENST00000446852 CCDC73Q6ZRK6 1079 aa20.22■□□□□ 0.83
SMC6-206ENST00000446852 NOL10Q9BSC4 688 aaKnown RBP20.22■□□□□ 0.83
SMC6-206ENST00000446852 KCNJ14Q9UNX9 436 aa20.22■□□□□ 0.83
SMC6-206ENST00000446852 MMP1P03956 469 aa20.22■□□□□ 0.83
SMC6-206ENST00000446852 DYNLL2Q96FJ2 89 aa20.22■□□□□ 0.83
SMC6-206ENST00000446852 BAZ2BQ9UIF8 2168 aaKnown RBP20.22■□□□□ 0.83
SMC6-206ENST00000446852 GOLGB1Q14789 3259 aaKnown RBP20.22■□□□□ 0.83
SMC6-206ENST00000446852 FAM205AQ6ZU69 1335 aa20.22■□□□□ 0.83
SMC6-206ENST00000446852 RIMBP2O15034 1052 aa20.21■□□□□ 0.83
SMC6-206ENST00000446852 PLEKHA8P1O95397 391 aa20.21■□□□□ 0.83
SMC6-206ENST00000446852 SF3A1Q15459 793 aaKnown RBP20.21■□□□□ 0.83
SMC6-206ENST00000446852 RNF26Q9BY78 433 aaPredicted RBP20.21■□□□□ 0.83
SMC6-206ENST00000446852 PARP3Q9Y6F1 533 aa20.21■□□□□ 0.83
SMC6-206ENST00000446852 GPR75-ASB3A0A0A6YYF3 556 aa20.21■□□□□ 0.83
SMC6-206ENST00000446852 A0A1W2PQ27 194 aa20.21■□□□□ 0.83
SMC6-206ENST00000446852 A0A1W2PQ64 194 aa20.21■□□□□ 0.83
SMC6-206ENST00000446852 A0A1W2PQD8 194 aa20.21■□□□□ 0.83
SMC6-206ENST00000446852 TSPY2A6NKD2 308 aa20.21■□□□□ 0.83
SMC6-206ENST00000446852 MAPKAPK5Q8IW41 473 aa20.21■□□□□ 0.83
SMC6-206ENST00000446852 MRPS27Q92552 414 aaKnown RBP20.21■□□□□ 0.83
SMC6-206ENST00000446852 DDAH1O94760 285 aa20.2■□□□□ 0.82
SMC6-206ENST00000446852 RCSD1Q6JBY9 416 aa20.2■□□□□ 0.82
SMC6-206ENST00000446852 SHISA4Q96DD7 197 aa20.2■□□□□ 0.82
SMC6-206ENST00000446852 USP25Q9UHP3 1055 aa20.2■□□□□ 0.82
SMC6-206ENST00000446852 QSER1Q2KHR3 1735 aa20.2■□□□□ 0.82
SMC6-206ENST00000446852 A0A1B0GVL5 298 aa20.2■□□□□ 0.82
SMC6-206ENST00000446852 BTBD18B2RXH4 712 aa20.2■□□□□ 0.82
SMC6-206ENST00000446852 PDE6BP35913 854 aa20.2■□□□□ 0.82
SMC6-206ENST00000446852 SLC39A14Q15043 492 aa20.2■□□□□ 0.82
SMC6-206ENST00000446852 DIS3L2Q8IYB7 885 aaKnown RBP20.2■□□□□ 0.82
SMC6-206ENST00000446852 FMR1NBQ8N0W7 255 aaPredicted RBP20.2■□□□□ 0.82
SMC6-206ENST00000446852 TBC1D22AQ8WUA7 517 aa20.2■□□□□ 0.82
SMC6-206ENST00000446852 MAP3K14Q99558 947 aa20.2■□□□□ 0.82
SMC6-206ENST00000446852 ESPNB1AK53 854 aa20.19■□□□□ 0.82
SMC6-206ENST00000446852 CALM1P0DP23 149 aa20.19■□□□□ 0.82
SMC6-206ENST00000446852 CALM2P0DP24 149 aa20.19■□□□□ 0.82
SMC6-206ENST00000446852 CALM3P0DP25 149 aa20.19■□□□□ 0.82
SMC6-206ENST00000446852 PLCD1P51178 756 aa20.19■□□□□ 0.82
SMC6-206ENST00000446852 GTF2IP78347 998 aa20.19■□□□□ 0.82
SMC6-206ENST00000446852 PKN1Q16512 942 aa20.19■□□□□ 0.82
SMC6-206ENST00000446852 AXDND1Q5T1B0 1012 aaPredicted RBP20.19■□□□□ 0.82
SMC6-206ENST00000446852 NOSTRINQ8IVI9 506 aa20.19■□□□□ 0.82
SMC6-206ENST00000446852 SAP30BPQ9UHR5 308 aaKnown RBP20.19■□□□□ 0.82
SMC6-206ENST00000446852 ADAMTSL1Q8N6G6 1762 aa20.19■□□□□ 0.82
SMC6-206ENST00000446852 PTPAQ15257 358 aa20.19■□□□□ 0.82
SMC6-206ENST00000446852 RBM28Q9NW13 759 aaKnown RBP20.19■□□□□ 0.82
SMC6-206ENST00000446852 GAKO14976 1311 aa20.19■□□□□ 0.82
SMC6-206ENST00000446852 KINO60870 393 aaKnown RBP20.18■□□□□ 0.82
SMC6-206ENST00000446852 WDHD1O75717 1129 aaPredicted RBP20.18■□□□□ 0.82
SMC6-206ENST00000446852 ALDH1B1P30837 517 aa20.18■□□□□ 0.82
SMC6-206ENST00000446852 NDUFA8P51970 172 aa20.18■□□□□ 0.82
SMC6-206ENST00000446852 RHBDL3P58872 404 aa20.18■□□□□ 0.82
SMC6-206ENST00000446852 TFAP4Q01664 338 aa20.18■□□□□ 0.82
SMC6-206ENST00000446852 ANO6Q4KMQ2 910 aa20.18■□□□□ 0.82
SMC6-206ENST00000446852 MPNDQ8N594 471 aa20.18■□□□□ 0.82
SMC6-206ENST00000446852 SLC44A5Q8NCS7 719 aa20.18■□□□□ 0.82
SMC6-206ENST00000446852 FAM163AQ96GL9 167 aaPredicted RBP20.18■□□□□ 0.82
SMC6-206ENST00000446852 COA1Q9GZY4 146 aa20.18■□□□□ 0.82
SMC6-206ENST00000446852 IL17RBQ9NRM6 502 aa20.18■□□□□ 0.82
SMC6-206ENST00000446852 hCG_1642624A0A1W2PR95 340 aa20.18■□□□□ 0.82
SMC6-206ENST00000446852 MARCKSP29966 332 aaPredicted RBP20.18■□□□□ 0.82
SMC6-206ENST00000446852 TMTC3Q6ZXV5 915 aa20.18■□□□□ 0.82
SMC6-206ENST00000446852 CERS3Q8IU89 383 aa20.18■□□□□ 0.82
SMC6-206ENST00000446852 TEX11Q8IYF3 940 aa20.18■□□□□ 0.82
SMC6-206ENST00000446852 FAM200AQ8TCP9 573 aa20.18■□□□□ 0.82
SMC6-206ENST00000446852 MASTLQ96GX5 879 aa20.18■□□□□ 0.82
SMC6-206ENST00000446852 SLX4Q8IY92 1834 aa20.17■□□□□ 0.82
SMC6-206ENST00000446852 PRPF3O43395 683 aaKnown RBP20.17■□□□□ 0.82
SMC6-206ENST00000446852 NR5A1Q13285 461 aa20.17■□□□□ 0.82
SMC6-206ENST00000446852 SAFBQ15424 915 aaKnown RBP eCLIP20.17■□□□□ 0.82
SMC6-206ENST00000446852 DPP8Q6V1X1 898 aaPredicted RBP20.17■□□□□ 0.82
SMC6-206ENST00000446852 FOXP1Q9H334 677 aaPredicted RBP20.17■□□□□ 0.82
SMC6-206ENST00000446852 ANO8Q9HCE9 1232 aaPredicted RBP20.17■□□□□ 0.82
SMC6-206ENST00000446852 RGS17Q9UGC6 210 aaPredicted RBP20.17■□□□□ 0.82
SMC6-206ENST00000446852 FLT1P17948 1338 aa20.17■□□□□ 0.82
SMC6-206ENST00000446852 CNTNAP5Q8WYK1 1306 aa20.17■□□□□ 0.82
SMC6-206ENST00000446852 CTAGE5O15320 804 aa20.16■□□□□ 0.82
SMC6-206ENST00000446852 TOB1P50616 345 aaPredicted RBP20.16■□□□□ 0.82
SMC6-206ENST00000446852 SASS6Q6UVJ0 657 aa20.16■□□□□ 0.82
SMC6-206ENST00000446852 AMOTL1Q8IY63 956 aa20.16■□□□□ 0.82
SMC6-206ENST00000446852 CERS5Q8N5B7 392 aa20.16■□□□□ 0.82
SMC6-206ENST00000446852 OXER1Q8TDS5 423 aa20.16■□□□□ 0.82
SMC6-206ENST00000446852 ZC3H12CQ9C0D7 883 aaKnown RBP20.16■□□□□ 0.82
SMC6-206ENST00000446852 V9GY48 417 aaPredicted RBP20.16■□□□□ 0.82
SMC6-206ENST00000446852 AP5Z1O43299 807 aa20.16■□□□□ 0.82
SMC6-206ENST00000446852 AKAP17AQ02040 695 aaKnown RBP20.16■□□□□ 0.82
SMC6-206ENST00000446852 SRBD1Q8N5C6 995 aaKnown RBP20.16■□□□□ 0.82
SMC6-206ENST00000446852 MKNK2Q9HBH9 465 aa20.16■□□□□ 0.82
SMC6-206ENST00000446852 VPS54Q9P1Q0 977 aa20.16■□□□□ 0.82
SMC6-206ENST00000446852 CTCFLQ8NI51 663 aaPredicted RBP20.15■□□□□ 0.82
SMC6-206ENST00000446852 DAGLAQ9Y4D2 1042 aa20.15■□□□□ 0.82
SMC6-206ENST00000446852 USP17L3A6NCW0 530 aa20.15■□□□□ 0.82
SMC6-206ENST00000446852 USP17L4A6NCW7 530 aa20.15■□□□□ 0.82
SMC6-206ENST00000446852 PPP6R2O75170 966 aa20.15■□□□□ 0.82
SMC6-206ENST00000446852 PLCG2P16885 1265 aa20.15■□□□□ 0.82
SMC6-206ENST00000446852 DOK7Q18PE1 504 aa20.15■□□□□ 0.82
SMC6-206ENST00000446852 HS1BP3Q53T59 392 aa20.15■□□□□ 0.82
SMC6-206ENST00000446852 USP17L1Q7RTZ2 530 aa20.15■□□□□ 0.82
SMC6-206ENST00000446852 SLF2Q8IX21 1173 aa20.15■□□□□ 0.82
SMC6-206ENST00000446852 FBXW7Q969H0 707 aa20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms