RNA–Protein interactions for RNA: ENST00000444896.1

HMGB3P6-201, Transcript of high mobility group box 3 pseudogene 6, humanhuman

BASIC

Gene HMGB3P6, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P6-201ENST00000444896 CCDC81Q6ZN84 652 aa7.24□□□□□ -1.25
HMGB3P6-201ENST00000444896 CDC37L1Q7L3B6 337 aa7.24□□□□□ -1.25
HMGB3P6-201ENST00000444896 SHISA5Q8N114 240 aa7.24□□□□□ -1.25
HMGB3P6-201ENST00000444896 RBBP8NLQ8NC74 664 aaPredicted RBP7.24□□□□□ -1.25
HMGB3P6-201ENST00000444896 GATA6Q92908 595 aa7.24□□□□□ -1.25
HMGB3P6-201ENST00000444896 SSU72Q9NP77 194 aaKnown RBP7.24□□□□□ -1.25
HMGB3P6-201ENST00000444896 PRKAG2Q9UGJ0 569 aa7.24□□□□□ -1.25
HMGB3P6-201ENST00000444896 H2AFB1P0C5Y9 115 aa7.23□□□□□ -1.25
HMGB3P6-201ENST00000444896 H2AFB2P0C5Z0 115 aa7.23□□□□□ -1.25
HMGB3P6-201ENST00000444896 SHDQ96IW2 340 aa7.23□□□□□ -1.25
HMGB3P6-201ENST00000444896 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.23□□□□□ -1.25
HMGB3P6-201ENST00000444896 SRRTQ9BXP5 876 aaKnown RBP7.23□□□□□ -1.25
HMGB3P6-201ENST00000444896 STOML1Q9UBI4 398 aa7.23□□□□□ -1.25
HMGB3P6-201ENST00000444896 MEIS3P2A8K0S8 358 aa7.22□□□□□ -1.25
HMGB3P6-201ENST00000444896 DYRK3O43781 588 aa7.22□□□□□ -1.25
HMGB3P6-201ENST00000444896 LRIG2O94898 1065 aa7.22□□□□□ -1.25
HMGB3P6-201ENST00000444896 CST3P01034 146 aaPredicted RBP7.22□□□□□ -1.25
HMGB3P6-201ENST00000444896 ADMP35318 185 aa7.22□□□□□ -1.25
HMGB3P6-201ENST00000444896 GIPRP48546 466 aa7.22□□□□□ -1.25
HMGB3P6-201ENST00000444896 PRAMEF13Q5VWM6 474 aa7.22□□□□□ -1.25
HMGB3P6-201ENST00000444896 PAOXQ6QHF9 649 aa7.22□□□□□ -1.25
HMGB3P6-201ENST00000444896 ATG4CQ96DT6 458 aa7.22□□□□□ -1.25
HMGB3P6-201ENST00000444896 FERD3LQ96RJ6 166 aa7.22□□□□□ -1.25
HMGB3P6-201ENST00000444896 FOXQ1Q9C009 403 aa7.22□□□□□ -1.25
HMGB3P6-201ENST00000444896 RBAK-RBAKDNI3L0D1 243 aa7.21□□□□□ -1.26
HMGB3P6-201ENST00000444896 IMPDH2P12268 514 aa7.21□□□□□ -1.26
HMGB3P6-201ENST00000444896 CDK5R2Q13319 367 aa7.21□□□□□ -1.26
HMGB3P6-201ENST00000444896 CDCP2Q5VXM1 449 aa7.21□□□□□ -1.26
HMGB3P6-201ENST00000444896 OVOS1Q6IE37 1185 aa7.21□□□□□ -1.26
HMGB3P6-201ENST00000444896 ARMCX6Q7L4S7 300 aa7.21□□□□□ -1.26
HMGB3P6-201ENST00000444896 LSRQ86X29 649 aaPredicted RBP7.21□□□□□ -1.26
HMGB3P6-201ENST00000444896 FAM13CQ8NE31 585 aa7.21□□□□□ -1.26
HMGB3P6-201ENST00000444896 TMEM40Q8WWA1 233 aa7.21□□□□□ -1.26
HMGB3P6-201ENST00000444896 DPH2Q9BQC3 489 aaPredicted RBP7.21□□□□□ -1.26
HMGB3P6-201ENST00000444896 TANGO6Q9C0B7 1094 aa7.21□□□□□ -1.26
HMGB3P6-201ENST00000444896 CNNM2Q9H8M5 875 aa7.21□□□□□ -1.26
HMGB3P6-201ENST00000444896 GMIPQ9P107 970 aa7.21□□□□□ -1.26
HMGB3P6-201ENST00000444896 KLHL3Q9UH77 587 aa7.21□□□□□ -1.26
HMGB3P6-201ENST00000444896 STRIP2Q9ULQ0 834 aa7.21□□□□□ -1.26
HMGB3P6-201ENST00000444896 ADAM23O75077 832 aa7.2□□□□□ -1.26
HMGB3P6-201ENST00000444896 ETFBP38117 255 aa7.2□□□□□ -1.26
HMGB3P6-201ENST00000444896 EIF6P56537 245 aaKnown RBP7.2□□□□□ -1.26
HMGB3P6-201ENST00000444896 LRRFIP1Q32MZ4 808 aaKnown RBP7.2□□□□□ -1.26
HMGB3P6-201ENST00000444896 FBXW10Q5XX13 1052 aa7.2□□□□□ -1.26
HMGB3P6-201ENST00000444896 RUFY4Q6ZNE9 571 aa7.2□□□□□ -1.26
HMGB3P6-201ENST00000444896 SLFN12Q8IYM2 578 aa7.2□□□□□ -1.26
HMGB3P6-201ENST00000444896 RIN3Q8TB24 985 aa7.2□□□□□ -1.26
HMGB3P6-201ENST00000444896 MRVI1Q9Y6F6 885 aa7.2□□□□□ -1.26
HMGB3P6-201ENST00000444896 LEFTY1O75610 366 aa7.19□□□□□ -1.26
HMGB3P6-201ENST00000444896 SLITRK5O94991 958 aa7.19□□□□□ -1.26
HMGB3P6-201ENST00000444896 NME1P15531 152 aaKnown RBP7.19□□□□□ -1.26
HMGB3P6-201ENST00000444896 ARSHQ5FYA8 562 aa7.19□□□□□ -1.26
HMGB3P6-201ENST00000444896 RNF43Q68DV7 783 aa7.19□□□□□ -1.26
HMGB3P6-201ENST00000444896 FAM169BQ8N8A8 192 aa7.19□□□□□ -1.26
HMGB3P6-201ENST00000444896 MFSD2AQ8NA29 543 aa7.19□□□□□ -1.26
HMGB3P6-201ENST00000444896 XAGE3Q8WTP9 111 aa7.19□□□□□ -1.26
HMGB3P6-201ENST00000444896 PPP1R13LQ8WUF5 828 aa7.19□□□□□ -1.26
HMGB3P6-201ENST00000444896 CPLX3Q8WVH0 158 aa7.19□□□□□ -1.26
HMGB3P6-201ENST00000444896 SREK1Q8WXA9 508 aaKnown RBP7.19□□□□□ -1.26
HMGB3P6-201ENST00000444896 TNFRSF10CO14798 259 aa7.18□□□□□ -1.26
HMGB3P6-201ENST00000444896 GSC2O15499 205 aa7.18□□□□□ -1.26
HMGB3P6-201ENST00000444896 F13BP05160 661 aa7.18□□□□□ -1.26
HMGB3P6-201ENST00000444896 SSBP05455 408 aaKnown RBP eCLIP7.18□□□□□ -1.26
HMGB3P6-201ENST00000444896 ACRP10323 421 aa7.18□□□□□ -1.26
HMGB3P6-201ENST00000444896 YARSP54577 528 aaKnown RBP7.18□□□□□ -1.26
HMGB3P6-201ENST00000444896 NFIAQ12857 509 aa7.18□□□□□ -1.26
HMGB3P6-201ENST00000444896 MLECQ14165 292 aa7.18□□□□□ -1.26
HMGB3P6-201ENST00000444896 FAM214BQ7L5A3 538 aa7.18□□□□□ -1.26
HMGB3P6-201ENST00000444896 NLRC3Q7RTR2 1065 aa7.18□□□□□ -1.26
HMGB3P6-201ENST00000444896 ZAR1Q86SH2 424 aa7.18□□□□□ -1.26
HMGB3P6-201ENST00000444896 GIMAP7Q8NHV1 300 aa7.18□□□□□ -1.26
HMGB3P6-201ENST00000444896 MFSD14AQ96MC6 490 aa7.18□□□□□ -1.26
HMGB3P6-201ENST00000444896 TBC1D32Q96NH3 1257 aa7.18□□□□□ -1.26
HMGB3P6-201ENST00000444896 DUSP23Q9BVJ7 150 aa7.18□□□□□ -1.26
HMGB3P6-201ENST00000444896 ZNF408Q9H9D4 720 aa7.18□□□□□ -1.26
HMGB3P6-201ENST00000444896 PRDM10Q9NQV6 1147 aa7.18□□□□□ -1.26
HMGB3P6-201ENST00000444896 CNTNAP4Q9C0A0 1308 aa7.18□□□□□ -1.26
HMGB3P6-201ENST00000444896 EOMESO95936 686 aa7.17□□□□□ -1.26
HMGB3P6-201ENST00000444896 FSTP19883 344 aa7.17□□□□□ -1.26
HMGB3P6-201ENST00000444896 ATP2B1P20020 1258 aa7.17□□□□□ -1.26
HMGB3P6-201ENST00000444896 PRSS36Q5K4E3 855 aa7.17□□□□□ -1.26
HMGB3P6-201ENST00000444896 INTS3Q68E01 1043 aaKnown RBP7.17□□□□□ -1.26
HMGB3P6-201ENST00000444896 OGFOD3Q6PK18 319 aa7.17□□□□□ -1.26
HMGB3P6-201ENST00000444896 TOP6BLQ8N6T0 577 aa7.17□□□□□ -1.26
HMGB3P6-201ENST00000444896 BAHD1Q8TBE0 780 aaPredicted RBP7.17□□□□□ -1.26
HMGB3P6-201ENST00000444896 ANAPC16Q96DE5 110 aa7.17□□□□□ -1.26
HMGB3P6-201ENST00000444896 CRBNQ96SW2 442 aa7.17□□□□□ -1.26
HMGB3P6-201ENST00000444896 SLC9A7Q96T83 725 aa7.17□□□□□ -1.26
HMGB3P6-201ENST00000444896 KIF2CQ99661 725 aa7.17□□□□□ -1.26
HMGB3P6-201ENST00000444896 COL17A1Q9UMD9 1497 aaPredicted RBP7.17□□□□□ -1.26
HMGB3P6-201ENST00000444896 SCO2A0A1W2PP80 73 aa7.16□□□□□ -1.26
HMGB3P6-201ENST00000444896 FAM170BA6NMN3 283 aa7.16□□□□□ -1.26
HMGB3P6-201ENST00000444896 RGS13O14921 159 aa7.16□□□□□ -1.26
HMGB3P6-201ENST00000444896 UBOX5O94941 541 aa7.16□□□□□ -1.26
HMGB3P6-201ENST00000444896 IGLV1-40P01703 118 aa7.16□□□□□ -1.26
HMGB3P6-201ENST00000444896 FAM87AP0C7U9 286 aa7.16□□□□□ -1.26
HMGB3P6-201ENST00000444896 POLR2BP30876 1174 aaKnown RBP7.16□□□□□ -1.26
HMGB3P6-201ENST00000444896 SF3A1Q15459 793 aaKnown RBP7.16□□□□□ -1.26
HMGB3P6-201ENST00000444896 CDH24Q86UP0 819 aa7.16□□□□□ -1.26
HMGB3P6-201ENST00000444896 TAB3Q8N5C8 712 aaPredicted RBP7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 625.2 ms