RNA–Protein interactions for RNA: ENST00000430982.1

PTCD1-204, Transcript of pentatricopeptide repeat domain 1, humanhuman

TSL 4

Gene PTCD1, Length 571 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-204ENST00000430982 RNF208Q9H0X6 261 aa18.36■□□□□ 0.53
PTCD1-204ENST00000430982 ALPK3Q96L96 1907 aa18.35■□□□□ 0.53
PTCD1-204ENST00000430982 DOCK2Q92608 1830 aa18.35■□□□□ 0.53
PTCD1-204ENST00000430982 ATRNL1Q5VV63 1379 aa18.35■□□□□ 0.53
PTCD1-204ENST00000430982 TCRBV5S4A2TA0A5A2 114 aa18.35■□□□□ 0.53
PTCD1-204ENST00000430982 SLURP2P0DP57 97 aa18.35■□□□□ 0.53
PTCD1-204ENST00000430982 BCRP11274 1271 aa18.35■□□□□ 0.53
PTCD1-204ENST00000430982 CAPN2P17655 700 aa18.35■□□□□ 0.53
PTCD1-204ENST00000430982 UBXN2AP68543 259 aa18.35■□□□□ 0.53
PTCD1-204ENST00000430982 ZSCAN25Q6NSZ9 544 aa18.35■□□□□ 0.53
PTCD1-204ENST00000430982 SLAIN1Q8ND83 568 aa18.35■□□□□ 0.53
PTCD1-204ENST00000430982 PI4K2BQ8TCG2 481 aa18.35■□□□□ 0.53
PTCD1-204ENST00000430982 LRCH3Q96II8 777 aa18.35■□□□□ 0.53
PTCD1-204ENST00000430982 RIOK1Q9BRS2 568 aaKnown RBP18.35■□□□□ 0.53
PTCD1-204ENST00000430982 SAP30BPQ9UHR5 308 aaKnown RBP18.35■□□□□ 0.53
PTCD1-204ENST00000430982 ZNF112Q9UJU3 913 aa18.35■□□□□ 0.53
PTCD1-204ENST00000430982 FMNL1O95466 1100 aaPredicted RBP18.34■□□□□ 0.53
PTCD1-204ENST00000430982 SGPL1O95470 568 aa18.34■□□□□ 0.53
PTCD1-204ENST00000430982 CHGBP05060 677 aa18.34■□□□□ 0.53
PTCD1-204ENST00000430982 PRKCZQ05513 592 aa18.34■□□□□ 0.53
PTCD1-204ENST00000430982 KBTBD3Q8NAB2 608 aa18.34■□□□□ 0.53
PTCD1-204ENST00000430982 COL2A1P02458 1487 aaPredicted RBP18.33■□□□□ 0.53
PTCD1-204ENST00000430982 SALL3Q9BXA9 1300 aa18.33■□□□□ 0.53
PTCD1-204ENST00000430982 FAM196BA6NMK8 535 aa18.33■□□□□ 0.52
PTCD1-204ENST00000430982 UBE3CQ15386 1083 aa18.33■□□□□ 0.52
PTCD1-204ENST00000430982 NOL9Q5SY16 702 aaKnown RBP18.33■□□□□ 0.52
PTCD1-204ENST00000430982 GPR153Q6NV75 609 aa18.33■□□□□ 0.52
PTCD1-204ENST00000430982 CHD1LQ86WJ1 897 aa18.33■□□□□ 0.52
PTCD1-204ENST00000430982 LCORLQ8N3X6 602 aa18.33■□□□□ 0.52
PTCD1-204ENST00000430982 CRNKL1Q9BZJ0 848 aaKnown RBP18.33■□□□□ 0.52
PTCD1-204ENST00000430982 UNC93B1Q9H1C4 597 aa18.33■□□□□ 0.52
PTCD1-204ENST00000430982 DHX36Q9H2U1 1008 aaKnown RBP18.33■□□□□ 0.52
PTCD1-204ENST00000430982 ARMT1Q9H993 441 aa18.33■□□□□ 0.52
PTCD1-204ENST00000430982 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.33■□□□□ 0.52
PTCD1-204ENST00000430982 AK9Q5TCS8 1911 aa18.33■□□□□ 0.52
PTCD1-204ENST00000430982 ECM2O94769 699 aaPredicted RBP18.32■□□□□ 0.52
PTCD1-204ENST00000430982 MBD4O95243 580 aa18.32■□□□□ 0.52
PTCD1-204ENST00000430982 PDE1AP54750 535 aa18.32■□□□□ 0.52
PTCD1-204ENST00000430982 NUCB1Q02818 461 aa18.32■□□□□ 0.52
PTCD1-204ENST00000430982 PARK7Q99497 189 aaKnown RBP18.32■□□□□ 0.52
PTCD1-204ENST00000430982 STAP2Q9UGK3 403 aa18.32■□□□□ 0.52
PTCD1-204ENST00000430982 PALD1Q9ULE6 856 aa18.32■□□□□ 0.52
PTCD1-204ENST00000430982 GABRQQ9UN88 632 aa18.32■□□□□ 0.52
PTCD1-204ENST00000430982 PHF20L1A8MW92 1017 aa18.31■□□□□ 0.52
PTCD1-204ENST00000430982 TBC1D12O60347 775 aa18.31■□□□□ 0.52
PTCD1-204ENST00000430982 HLA-DOAP06340 250 aa18.31■□□□□ 0.52
PTCD1-204ENST00000430982 FCGRTP55899 365 aa18.31■□□□□ 0.52
PTCD1-204ENST00000430982 MAP3K10Q02779 954 aa18.31■□□□□ 0.52
PTCD1-204ENST00000430982 GPAT2Q6NUI2 795 aa18.31■□□□□ 0.52
PTCD1-204ENST00000430982 FSD1Q9BTV5 496 aa18.31■□□□□ 0.52
PTCD1-204ENST00000430982 TRIM34Q9BYJ4 488 aa18.31■□□□□ 0.52
PTCD1-204ENST00000430982 PAK6Q9NQU5 681 aaPredicted RBP18.31■□□□□ 0.52
PTCD1-204ENST00000430982 PI4KBQ9UBF8 816 aa18.31■□□□□ 0.52
PTCD1-204ENST00000430982 RNF113AO15541 343 aaKnown RBP18.3■□□□□ 0.52
PTCD1-204ENST00000430982 EVI5O60447 810 aa18.3■□□□□ 0.52
PTCD1-204ENST00000430982 BMP8BP34820 402 aa18.3■□□□□ 0.52
PTCD1-204ENST00000430982 IRF5Q13568 498 aa18.3■□□□□ 0.52
PTCD1-204ENST00000430982 CRACR2BQ8N4Y2 399 aaPredicted RBP18.3■□□□□ 0.52
PTCD1-204ENST00000430982 PXYLP1Q8TE99 480 aa18.3■□□□□ 0.52
PTCD1-204ENST00000430982 PICK1Q9NRD5 415 aa18.3■□□□□ 0.52
PTCD1-204ENST00000430982 UNC80Q8N2C7 3258 aa18.3■□□□□ 0.52
PTCD1-204ENST00000430982 LRRFIP1Q32MZ4 808 aaKnown RBP18.29■□□□□ 0.52
PTCD1-204ENST00000430982 SCYL3Q8IZE3 742 aa18.29■□□□□ 0.52
PTCD1-204ENST00000430982 SDR42E1Q8WUS8 393 aa18.29■□□□□ 0.52
PTCD1-204ENST00000430982 GDF15Q99988 308 aa18.29■□□□□ 0.52
PTCD1-204ENST00000430982 CRISPLD2Q9H0B8 497 aa18.29■□□□□ 0.52
PTCD1-204ENST00000430982 PUS7LQ9H0K6 701 aaKnown RBP18.29■□□□□ 0.52
PTCD1-204ENST00000430982 BIN2Q9UBW5 565 aaPredicted RBP18.29■□□□□ 0.52
PTCD1-204ENST00000430982 HERC5Q9UII4 1024 aaKnown RBP18.29■□□□□ 0.52
PTCD1-204ENST00000430982 PTPRFP10586 1907 aa18.28■□□□□ 0.52
PTCD1-204ENST00000430982 CXCL11O14625 94 aa18.28■□□□□ 0.52
PTCD1-204ENST00000430982 PRKAB2O43741 272 aa18.28■□□□□ 0.52
PTCD1-204ENST00000430982 ADCY3O60266 1144 aa18.28■□□□□ 0.52
PTCD1-204ENST00000430982 CTNND1O60716 968 aaKnown RBP18.28■□□□□ 0.52
PTCD1-204ENST00000430982 POLR3DP05423 398 aaPredicted RBP18.28■□□□□ 0.52
PTCD1-204ENST00000430982 ZFYP08048 801 aaPredicted RBP18.28■□□□□ 0.52
PTCD1-204ENST00000430982 CYP2C8P10632 490 aa18.28■□□□□ 0.52
PTCD1-204ENST00000430982 FOXP4Q8IVH2 680 aaPredicted RBP18.28■□□□□ 0.52
PTCD1-204ENST00000430982 APPBP2Q92624 585 aa18.28■□□□□ 0.52
PTCD1-204ENST00000430982 MCM9Q9NXL9 1143 aa18.28■□□□□ 0.52
PTCD1-204ENST00000430982 INHAP05111 366 aa18.27■□□□□ 0.52
PTCD1-204ENST00000430982 TTC6Q86TZ1 520 aa18.27■□□□□ 0.52
PTCD1-204ENST00000430982 SLC4A4Q9Y6R1 1079 aa18.27■□□□□ 0.52
PTCD1-204ENST00000430982 A0A0G2JLL6 359 aaPredicted RBP18.26■□□□□ 0.51
PTCD1-204ENST00000430982 FLT3LGP49771 235 aa18.26■□□□□ 0.51
PTCD1-204ENST00000430982 PRRT2Q7Z6L0 340 aaPredicted RBP18.26■□□□□ 0.51
PTCD1-204ENST00000430982 PLEKHM2Q8IWE5 1019 aa18.26■□□□□ 0.51
PTCD1-204ENST00000430982 OSBP2Q969R2 916 aa18.26■□□□□ 0.51
PTCD1-204ENST00000430982 EVI5LQ96CN4 794 aa18.26■□□□□ 0.51
PTCD1-204ENST00000430982 DCP1AQ9NPI6 582 aaPredicted RBP18.26■□□□□ 0.51
PTCD1-204ENST00000430982 SLC45A1Q9Y2W3 748 aa18.26■□□□□ 0.51
PTCD1-204ENST00000430982 TRIM6-TRIM34B2RNG4 842 aa18.25■□□□□ 0.51
PTCD1-204ENST00000430982 ELNP15502 786 aa18.25■□□□□ 0.51
PTCD1-204ENST00000430982 PTPRAP18433 802 aa18.25■□□□□ 0.51
PTCD1-204ENST00000430982 RRP1BQ14684 758 aaKnown RBP18.25■□□□□ 0.51
PTCD1-204ENST00000430982 LRIT3Q3SXY7 679 aa18.25■□□□□ 0.51
PTCD1-204ENST00000430982 DDRGK1Q96HY6 314 aa18.25■□□□□ 0.51
PTCD1-204ENST00000430982 DEFB118Q96PH6 123 aa18.25■□□□□ 0.51
PTCD1-204ENST00000430982 DNAJC18Q9H819 358 aa18.25■□□□□ 0.51
PTCD1-204ENST00000430982 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms