RNA–Protein interactions for RNA: ENST00000425718.1

APOE-202, Transcript of apolipoprotein E, humanhuman

TSL 1 (best)

Gene APOE, Length 923 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOE-202ENST00000425718 UBE2Q2LH0YL09 131 aa28.52■■■□□ 2.16
APOE-202ENST00000425718 CYP21A2P08686 494 aa28.52■■■□□ 2.16
APOE-202ENST00000425718 ABCB5Q2M3G0 1257 aa28.52■■■□□ 2.16
APOE-202ENST00000425718 CREB3L3Q68CJ9 461 aa28.52■■■□□ 2.16
APOE-202ENST00000425718 SLC10A4Q96EP9 437 aa28.52■■■□□ 2.16
APOE-202ENST00000425718 USP26Q9BXU7 913 aa28.52■■■□□ 2.16
APOE-202ENST00000425718 TOMM22Q9NS69 142 aa28.52■■■□□ 2.16
APOE-202ENST00000425718 DDX52Q9Y2R4 599 aaKnown RBP eCLIP28.52■■■□□ 2.16
APOE-202ENST00000425718 TMEM179Q6ZVK1 233 aa28.51■■■□□ 2.15
APOE-202ENST00000425718 ESR2Q92731 530 aa28.51■■■□□ 2.15
APOE-202ENST00000425718 SLC27A2O14975 620 aa28.5■■■□□ 2.15
APOE-202ENST00000425718 INPP5BP32019 993 aa28.5■■■□□ 2.15
APOE-202ENST00000425718 VGLL4Q14135 290 aa28.5■■■□□ 2.15
APOE-202ENST00000425718 PPP1R3FQ6ZSY5 799 aaPredicted RBP28.5■■■□□ 2.15
APOE-202ENST00000425718 SLC44A5Q8NCS7 719 aa28.5■■■□□ 2.15
APOE-202ENST00000425718 AS3MTQ9HBK9 375 aa28.5■■■□□ 2.15
APOE-202ENST00000425718 GREB1LQ9C091 1923 aaPredicted RBP28.49■■■□□ 2.15
APOE-202ENST00000425718 RASA1P20936 1047 aa28.49■■■□□ 2.15
APOE-202ENST00000425718 HSPA4P34932 840 aa28.49■■■□□ 2.15
APOE-202ENST00000425718 TSGA10IPQ3SY00 556 aa28.49■■■□□ 2.15
APOE-202ENST00000425718 CCDC178Q5BJE1 867 aa28.49■■■□□ 2.15
APOE-202ENST00000425718 RALYLQ86SE5 291 aaKnown RBP28.49■■■□□ 2.15
APOE-202ENST00000425718 ERO1BQ86YB8 467 aa28.49■■■□□ 2.15
APOE-202ENST00000425718 CCDC102AQ96A19 550 aa28.49■■■□□ 2.15
APOE-202ENST00000425718 PLIN4Q96Q06 1357 aa28.49■■■□□ 2.15
APOE-202ENST00000425718 TSPY2A6NKD2 308 aa28.48■■■□□ 2.15
APOE-202ENST00000425718 MPHOSPH10O00566 681 aaKnown RBP28.48■■■□□ 2.15
APOE-202ENST00000425718 TSPY3P0CV98 308 aa28.48■■■□□ 2.15
APOE-202ENST00000425718 TSPY8P0CW00 308 aa28.48■■■□□ 2.15
APOE-202ENST00000425718 HSPA6P17066 643 aa28.48■■■□□ 2.15
APOE-202ENST00000425718 EVX2Q03828 476 aa28.48■■■□□ 2.15
APOE-202ENST00000425718 RGMBQ6NW40 437 aa28.48■■■□□ 2.15
APOE-202ENST00000425718 MOB2Q70IA6 237 aa28.48■■■□□ 2.15
APOE-202ENST00000425718 TBC1D10CQ8IV04 446 aa28.48■■■□□ 2.15
APOE-202ENST00000425718 STK11IPQ8N1F8 1099 aa28.48■■■□□ 2.15
APOE-202ENST00000425718 NCOA7Q8NI08 942 aa28.48■■■□□ 2.15
APOE-202ENST00000425718 ZKSCAN4Q969J2 545 aaPredicted RBP28.48■■■□□ 2.15
APOE-202ENST00000425718 ZBTB21Q9ULJ3 1066 aa28.48■■■□□ 2.15
APOE-202ENST00000425718 USP17L5A8MUK1 530 aa28.47■■■□□ 2.15
APOE-202ENST00000425718 RANBP6O60518 1105 aaKnown RBP28.47■■■□□ 2.15
APOE-202ENST00000425718 PPATQ06203 517 aa28.47■■■□□ 2.15
APOE-202ENST00000425718 FZD1Q9UP38 647 aa28.47■■■□□ 2.15
APOE-202ENST00000425718 SNCAIPQ9Y6H5 919 aa28.47■■■□□ 2.15
APOE-202ENST00000425718 PHIPQ8WWQ0 1821 aa28.46■■■□□ 2.15
APOE-202ENST00000425718 MYH4Q9Y623 1939 aa28.46■■■□□ 2.15
APOE-202ENST00000425718 RASSF10A6NK89 507 aa28.46■■■□□ 2.15
APOE-202ENST00000425718 GDF11O95390 407 aa28.46■■■□□ 2.15
APOE-202ENST00000425718 GH2P01242 217 aa28.46■■■□□ 2.15
APOE-202ENST00000425718 ECE1P42892 770 aa28.46■■■□□ 2.15
APOE-202ENST00000425718 ZNF157P51786 506 aaPredicted RBP28.46■■■□□ 2.15
APOE-202ENST00000425718 RRP12Q5JTH9 1297 aaKnown RBP28.46■■■□□ 2.15
APOE-202ENST00000425718 KCNB2Q92953 911 aa28.46■■■□□ 2.15
APOE-202ENST00000425718 NBPF3Q9H094 633 aa28.46■■■□□ 2.15
APOE-202ENST00000425718 SPDYE5A6NIY4 337 aa28.45■■■□□ 2.14
APOE-202ENST00000425718 E7EWF7 191 aa28.45■■■□□ 2.14
APOE-202ENST00000425718 PRDM1O75626 825 aa28.45■■■□□ 2.14
APOE-202ENST00000425718 HMGB1P09429 215 aaKnown RBP28.45■■■□□ 2.14
APOE-202ENST00000425718 ZBTB48P10074 688 aaPredicted RBP28.45■■■□□ 2.14
APOE-202ENST00000425718 DEFB115Q30KQ5 88 aa28.45■■■□□ 2.14
APOE-202ENST00000425718 IQCA1Q86XH1 822 aa28.45■■■□□ 2.14
APOE-202ENST00000425718 NEDD1Q8NHV4 660 aa28.45■■■□□ 2.14
APOE-202ENST00000425718 KANSL2Q9H9L4 492 aa28.45■■■□□ 2.14
APOE-202ENST00000425718 ELP3Q9H9T3 547 aa28.45■■■□□ 2.14
APOE-202ENST00000425718 SMIM22K7EJ46 135 aa28.44■■■□□ 2.14
APOE-202ENST00000425718 SLURP2P0DP57 97 aa28.44■■■□□ 2.14
APOE-202ENST00000425718 AKR1B1P15121 316 aa28.44■■■□□ 2.14
APOE-202ENST00000425718 PTPRAP18433 802 aa28.44■■■□□ 2.14
APOE-202ENST00000425718 ANAPC15P60006 121 aa28.44■■■□□ 2.14
APOE-202ENST00000425718 TFAP4Q01664 338 aa28.44■■■□□ 2.14
APOE-202ENST00000425718 PPIL2Q13356 520 aa28.44■■■□□ 2.14
APOE-202ENST00000425718 SH2D4AQ9H788 454 aa28.44■■■□□ 2.14
APOE-202ENST00000425718 PSMA5P28066 241 aa28.43■■■□□ 2.14
APOE-202ENST00000425718 RAB3GAP1Q15042 981 aa28.43■■■□□ 2.14
APOE-202ENST00000425718 MTA3Q9BTC8 594 aa28.43■■■□□ 2.14
APOE-202ENST00000425718 ARHGEF10LQ9HCE6 1279 aa28.43■■■□□ 2.14
APOE-202ENST00000425718 TCP11L1Q9NUJ3 509 aa28.43■■■□□ 2.14
APOE-202ENST00000425718 NEDD4P46934 1319 aa28.43■■■□□ 2.14
APOE-202ENST00000425718 RRP1BQ14684 758 aaKnown RBP28.42■■■□□ 2.14
APOE-202ENST00000425718 SART3Q15020 963 aaKnown RBP28.42■■■□□ 2.14
APOE-202ENST00000425718 CLMNQ96JQ2 1002 aa28.42■■■□□ 2.14
APOE-202ENST00000425718 WDR18Q9BV38 432 aa28.42■■■□□ 2.14
APOE-202ENST00000425718 BACH2Q9BYV9 841 aa28.42■■■□□ 2.14
APOE-202ENST00000425718 PTPRFP10586 1907 aa28.41■■■□□ 2.14
APOE-202ENST00000425718 OPTNQ96CV9 577 aa28.41■■■□□ 2.14
APOE-202ENST00000425718 WNK4Q96J92 1243 aa28.41■■■□□ 2.14
APOE-202ENST00000425718 SYNPO2Q9UMS6 1093 aa28.41■■■□□ 2.14
APOE-202ENST00000425718 B4E1Z4 1266 aa28.4■■■□□ 2.14
APOE-202ENST00000425718 CXCL11O14625 94 aa28.4■■■□□ 2.14
APOE-202ENST00000425718 SLC10A3P09131 477 aa28.4■■■□□ 2.14
APOE-202ENST00000425718 ICA1Q05084 483 aa28.4■■■□□ 2.14
APOE-202ENST00000425718 PAXIP1Q6ZW49 1069 aaPredicted RBP28.4■■■□□ 2.14
APOE-202ENST00000425718 RASAL3Q86YV0 1011 aa28.4■■■□□ 2.14
APOE-202ENST00000425718 REM2Q8IYK8 340 aaPredicted RBP28.4■■■□□ 2.14
APOE-202ENST00000425718 ZNF280CQ8ND82 737 aa28.4■■■□□ 2.14
APOE-202ENST00000425718 ZHX2Q9Y6X8 837 aa28.4■■■□□ 2.14
APOE-202ENST00000425718 KDM4AO75164 1064 aa28.39■■■□□ 2.14
APOE-202ENST00000425718 MCM5P33992 734 aa28.39■■■□□ 2.14
APOE-202ENST00000425718 SEPT2Q15019 361 aa28.39■■■□□ 2.14
APOE-202ENST00000425718 FAM47AQ5JRC9 791 aa28.39■■■□□ 2.14
APOE-202ENST00000425718 OTUD5Q96G74 571 aa28.39■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms