RNA–Protein interactions for RNA: ENST00000425660.5

ACTB-204, Transcript of actin beta, humanhuman

TSL 1 (best)

Gene ACTB, Length 1,845 nt, Biotype nonsense mediated decay, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-204ENST00000425660 CCDC144CPQ8IYA2 1237 aa17.72■□□□□ 0.43
ACTB-204ENST00000425660 MKNK2Q9HBH9 465 aa17.72■□□□□ 0.43
ACTB-204ENST00000425660 DDX4Q9NQI0 724 aaKnown RBP17.72■□□□□ 0.43
ACTB-204ENST00000425660 PSME4Q14997 1843 aa17.72■□□□□ 0.43
ACTB-204ENST00000425660 MYO3BQ8WXR4 1341 aa17.72■□□□□ 0.43
ACTB-204ENST00000425660 COL4A5P29400 1685 aa17.72■□□□□ 0.43
ACTB-204ENST00000425660 RASA1P20936 1047 aa17.72■□□□□ 0.43
ACTB-204ENST00000425660 IARSP41252 1262 aaKnown RBP17.72■□□□□ 0.43
ACTB-204ENST00000425660 TFAP4Q01664 338 aa17.72■□□□□ 0.43
ACTB-204ENST00000425660 GABPAQ06546 454 aa17.72■□□□□ 0.43
ACTB-204ENST00000425660 CCDC178Q5BJE1 867 aa17.72■□□□□ 0.43
ACTB-204ENST00000425660 DALRD3Q5D0E6 543 aaKnown RBP17.72■□□□□ 0.43
ACTB-204ENST00000425660 CATIPQ7Z7H3 387 aa17.72■□□□□ 0.43
ACTB-204ENST00000425660 USP48Q86UV5 1035 aa17.72■□□□□ 0.43
ACTB-204ENST00000425660 IL17RBQ9NRM6 502 aa17.72■□□□□ 0.43
ACTB-204ENST00000425660 PPP1R1BQ9UD71 204 aaPredicted RBP17.72■□□□□ 0.43
ACTB-204ENST00000425660 ADAMTSL1Q8N6G6 1762 aa17.71■□□□□ 0.43
ACTB-204ENST00000425660 NMT2O60551 498 aa17.71■□□□□ 0.43
ACTB-204ENST00000425660 NPM3O75607 178 aaKnown RBP17.71■□□□□ 0.43
ACTB-204ENST00000425660 FMNL1O95466 1100 aaPredicted RBP17.71■□□□□ 0.43
ACTB-204ENST00000425660 MBD3O95983 291 aa17.71■□□□□ 0.43
ACTB-204ENST00000425660 CDK8P49336 464 aa17.71■□□□□ 0.43
ACTB-204ENST00000425660 KRT85P78386 507 aa17.71■□□□□ 0.43
ACTB-204ENST00000425660 CSPP1Q1MSJ5 1256 aa17.71■□□□□ 0.43
ACTB-204ENST00000425660 NBPF11Q86T75 865 aa17.71■□□□□ 0.43
ACTB-204ENST00000425660 TTC6Q86TZ1 520 aa17.71■□□□□ 0.43
ACTB-204ENST00000425660 KLHL34Q8N239 644 aa17.71■□□□□ 0.43
ACTB-204ENST00000425660 SLC44A5Q8NCS7 719 aa17.71■□□□□ 0.43
ACTB-204ENST00000425660 GPT2Q8TD30 523 aa17.71■□□□□ 0.43
ACTB-204ENST00000425660 C8orf76Q96K31 380 aa17.71■□□□□ 0.43
ACTB-204ENST00000425660 GDPD2Q9HCC8 539 aa17.71■□□□□ 0.43
ACTB-204ENST00000425660 ZNF277Q9NRM2 450 aaPredicted RBP17.71■□□□□ 0.43
ACTB-204ENST00000425660 VIL1P09327 827 aaKnown RBP17.7■□□□□ 0.42
ACTB-204ENST00000425660 ZNF444Q8N0Y2 327 aaPredicted RBP17.7■□□□□ 0.42
ACTB-204ENST00000425660 LARGE2Q8N3Y3 721 aa17.7■□□□□ 0.42
ACTB-204ENST00000425660 PHKBQ93100 1093 aa17.7■□□□□ 0.42
ACTB-204ENST00000425660 IDI2Q9BXS1 227 aa17.7■□□□□ 0.42
ACTB-204ENST00000425660 OSBPL5Q9H0X9 879 aaPredicted RBP17.7■□□□□ 0.42
ACTB-204ENST00000425660 ELP1O95163 1332 aa17.7■□□□□ 0.42
ACTB-204ENST00000425660 CRACR2BQ8N4Y2 399 aaPredicted RBP17.7■□□□□ 0.42
ACTB-204ENST00000425660 RBM28Q9NW13 759 aaKnown RBP17.7■□□□□ 0.42
ACTB-204ENST00000425660 MYH1P12882 1939 aa17.69■□□□□ 0.42
ACTB-204ENST00000425660 TSPY3P0CV98 308 aa17.69■□□□□ 0.42
ACTB-204ENST00000425660 TSPY8P0CW00 308 aa17.69■□□□□ 0.42
ACTB-204ENST00000425660 PICALMQ13492 652 aa17.69■□□□□ 0.42
ACTB-204ENST00000425660 FAM173BQ6P4H8 233 aa17.69■□□□□ 0.42
ACTB-204ENST00000425660 RSBN1LQ6PCB5 846 aaPredicted RBP17.69■□□□□ 0.42
ACTB-204ENST00000425660 NUP133Q8WUM0 1156 aa17.69■□□□□ 0.42
ACTB-204ENST00000425660 GMLQ99445 158 aa17.69■□□□□ 0.42
ACTB-204ENST00000425660 MAP3K14Q99558 947 aa17.69■□□□□ 0.42
ACTB-204ENST00000425660 SCAND2PQ9GZW5 306 aaPredicted RBP17.69■□□□□ 0.42
ACTB-204ENST00000425660 TCHHQ07283 1943 aa17.69■□□□□ 0.42
ACTB-204ENST00000425660 PLIN4Q96Q06 1357 aa17.69■□□□□ 0.42
ACTB-204ENST00000425660 FIBPO43427 364 aa17.68■□□□□ 0.42
ACTB-204ENST00000425660 NOVP48745 357 aa17.68■□□□□ 0.42
ACTB-204ENST00000425660 SSRP1Q08945 709 aaKnown RBP17.68■□□□□ 0.42
ACTB-204ENST00000425660 FUT2Q10981 343 aa17.68■□□□□ 0.42
ACTB-204ENST00000425660 ATL3Q6DD88 541 aa17.68■□□□□ 0.42
ACTB-204ENST00000425660 NEDD1Q8NHV4 660 aa17.68■□□□□ 0.42
ACTB-204ENST00000425660 WASF1Q92558 559 aa17.68■□□□□ 0.42
ACTB-204ENST00000425660 ALG1Q9BT22 464 aa17.68■□□□□ 0.42
ACTB-204ENST00000425660 TAOK2Q9UL54 1235 aa17.68■□□□□ 0.42
ACTB-204ENST00000425660 NCLP19338 710 aaKnown RBP17.68■□□□□ 0.42
ACTB-204ENST00000425660 UBE2HP62256 183 aa17.68■□□□□ 0.42
ACTB-204ENST00000425660 NFIAQ12857 509 aa17.68■□□□□ 0.42
ACTB-204ENST00000425660 TRIM22Q8IYM9 498 aa17.68■□□□□ 0.42
ACTB-204ENST00000425660 SLC26A6Q9BXS9 759 aa17.68■□□□□ 0.42
ACTB-204ENST00000425660 RNF26Q9BY78 433 aaPredicted RBP17.68■□□□□ 0.42
ACTB-204ENST00000425660 GZF1Q9H116 711 aaPredicted RBP17.68■□□□□ 0.42
ACTB-204ENST00000425660 EHD4Q9H223 541 aa17.68■□□□□ 0.42
ACTB-204ENST00000425660 SPON1Q9HCB6 807 aa17.68■□□□□ 0.42
ACTB-204ENST00000425660 SERPINB13Q9UIV8 391 aa17.68■□□□□ 0.42
ACTB-204ENST00000425660 ZNRF3Q9ULT6 936 aa17.68■□□□□ 0.42
ACTB-204ENST00000425660 ECM29Q5VYK3 1845 aa17.67■□□□□ 0.42
ACTB-204ENST00000425660 TAOK3Q9H2K8 898 aa17.67■□□□□ 0.42
ACTB-204ENST00000425660 DHX36Q9H2U1 1008 aaKnown RBP17.67■□□□□ 0.42
ACTB-204ENST00000425660 SWAP70Q9UH65 585 aa17.67■□□□□ 0.42
ACTB-204ENST00000425660 PCDHAC2Q9Y5I4 1007 aa17.67■□□□□ 0.42
ACTB-204ENST00000425660 FER1L6Q2WGJ9 1857 aa17.67■□□□□ 0.42
ACTB-204ENST00000425660 PSMD14O00487 310 aa17.66■□□□□ 0.42
ACTB-204ENST00000425660 GADD45BO75293 160 aaPredicted RBP17.66■□□□□ 0.42
ACTB-204ENST00000425660 DEXIO95424 95 aa17.66■□□□□ 0.42
ACTB-204ENST00000425660 GUCY1B3Q02153 619 aa17.66■□□□□ 0.42
ACTB-204ENST00000425660 NIM1KQ8IY84 436 aa17.66■□□□□ 0.42
ACTB-204ENST00000425660 AIFM3Q96NN9 605 aa17.66■□□□□ 0.42
ACTB-204ENST00000425660 CFAP45Q9UL16 551 aa17.66■□□□□ 0.42
ACTB-204ENST00000425660 RBM5P52756 815 aaKnown RBP eCLIP17.65■□□□□ 0.429e-7■■■□□ 17.1
ACTB-204ENST00000425660 FOSBP53539 338 aa17.65■□□□□ 0.42
ACTB-204ENST00000425660 OTUD7BQ6GQQ9 843 aa17.65■□□□□ 0.42
ACTB-204ENST00000425660 TMTC3Q6ZXV5 915 aa17.65■□□□□ 0.42
ACTB-204ENST00000425660 BRAPQ7Z569 592 aa17.65■□□□□ 0.42
ACTB-204ENST00000425660 KAT14Q9H8E8 782 aa17.65■□□□□ 0.42
ACTB-204ENST00000425660 GJB4Q9NTQ9 266 aa17.65■□□□□ 0.42
ACTB-204ENST00000425660 FAM198AQ9UFP1 575 aa17.65■□□□□ 0.42
ACTB-204ENST00000425660 NFKBIEO00221 500 aa17.65■□□□□ 0.42
ACTB-204ENST00000425660 RAD17O75943 681 aa17.65■□□□□ 0.42
ACTB-204ENST00000425660 HLA-DOAP06340 250 aa17.65■□□□□ 0.42
ACTB-204ENST00000425660 KIF23Q02241 960 aaPredicted RBP17.65■□□□□ 0.42
ACTB-204ENST00000425660 CFAP100Q494V2 611 aa17.65■□□□□ 0.42
ACTB-204ENST00000425660 KRT40Q6A162 431 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms