RNA–Protein interactions for RNA: ENST00000422489.1

NUP50-206, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 543 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-206ENST00000422489 MTMR2Q13614 643 aa11.25□□□□□ -0.61
NUP50-206ENST00000422489 TMED8Q6PL24 325 aaPredicted RBP11.25□□□□□ -0.61
NUP50-206ENST00000422489 RIOK1Q9BRS2 568 aaKnown RBP11.25□□□□□ -0.61
NUP50-206ENST00000422489 WDR18Q9BV38 432 aa11.25□□□□□ -0.61
NUP50-206ENST00000422489 CRNKL1Q9BZJ0 848 aaKnown RBP11.25□□□□□ -0.61
NUP50-206ENST00000422489 DNAJC18Q9H819 358 aa11.25□□□□□ -0.61
NUP50-206ENST00000422489 GABRQQ9UN88 632 aa11.25□□□□□ -0.61
NUP50-206ENST00000422489 MYPNQ86TC9 1320 aa11.25□□□□□ -0.61
NUP50-206ENST00000422489 AK9Q5TCS8 1911 aa11.25□□□□□ -0.61
NUP50-206ENST00000422489 COL2A1P02458 1487 aaPredicted RBP11.25□□□□□ -0.61
NUP50-206ENST00000422489 USP17L10C9JJH3 530 aa11.24□□□□□ -0.61
NUP50-206ENST00000422489 TNPO2O14787 897 aaKnown RBP11.24□□□□□ -0.61
NUP50-206ENST00000422489 GH2P01242 217 aa11.24□□□□□ -0.61
NUP50-206ENST00000422489 GRK4P32298 578 aa11.24□□□□□ -0.61
NUP50-206ENST00000422489 PLCD1P51178 756 aa11.24□□□□□ -0.61
NUP50-206ENST00000422489 RAB3GAP1Q15042 981 aa11.24□□□□□ -0.61
NUP50-206ENST00000422489 SLFNL1Q499Z3 407 aa11.24□□□□□ -0.61
NUP50-206ENST00000422489 CERKLQ49MI3 558 aaPredicted RBP11.24□□□□□ -0.61
NUP50-206ENST00000422489 SH3D19Q5HYK7 790 aa11.24□□□□□ -0.61
NUP50-206ENST00000422489 METTL16Q86W50 562 aaKnown RBP11.24□□□□□ -0.61
NUP50-206ENST00000422489 P2RX7Q99572 595 aaKnown RBP11.24□□□□□ -0.61
NUP50-206ENST00000422489 ASCC2Q9H1I8 757 aaPredicted RBP11.24□□□□□ -0.61
NUP50-206ENST00000422489 ARMT1Q9H993 441 aa11.24□□□□□ -0.61
NUP50-206ENST00000422489 CABP5Q9NP86 173 aa11.24□□□□□ -0.61
NUP50-206ENST00000422489 GINM1Q9NU53 330 aa11.24□□□□□ -0.61
NUP50-206ENST00000422489 MCM9Q9NXL9 1143 aa11.24□□□□□ -0.61
NUP50-206ENST00000422489 SERPINB13Q9UIV8 391 aa11.24□□□□□ -0.61
NUP50-206ENST00000422489 ZBTB21Q9ULJ3 1066 aa11.24□□□□□ -0.61
NUP50-206ENST00000422489 C19orf81C9J6K1 198 aa11.23□□□□□ -0.61
NUP50-206ENST00000422489 GCLCP48506 637 aaPredicted RBP11.23□□□□□ -0.61
NUP50-206ENST00000422489 UBXN2AP68543 259 aa11.23□□□□□ -0.61
NUP50-206ENST00000422489 IRX3P78415 501 aaPredicted RBP11.23□□□□□ -0.61
NUP50-206ENST00000422489 MTFR1Q15390 333 aa11.23□□□□□ -0.61
NUP50-206ENST00000422489 ZYXQ15942 572 aaKnown RBP11.23□□□□□ -0.61
NUP50-206ENST00000422489 ABCB5Q2M3G0 1257 aa11.23□□□□□ -0.61
NUP50-206ENST00000422489 TATDN1Q6P1N9 297 aa11.23□□□□□ -0.61
NUP50-206ENST00000422489 LCORLQ8N3X6 602 aa11.23□□□□□ -0.61
NUP50-206ENST00000422489 SDR42E1Q8WUS8 393 aa11.23□□□□□ -0.61
NUP50-206ENST00000422489 COA7Q96BR5 231 aa11.23□□□□□ -0.61
NUP50-206ENST00000422489 HAUS7Q99871 368 aa11.23□□□□□ -0.61
NUP50-206ENST00000422489 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.23□□□□□ -0.61
NUP50-206ENST00000422489 TCRBV5S4A2TA0A5A2 114 aa11.22□□□□□ -0.61
NUP50-206ENST00000422489 MPHOSPH10O00566 681 aaKnown RBP11.22□□□□□ -0.61
NUP50-206ENST00000422489 PRKAB2O43741 272 aa11.22□□□□□ -0.61
NUP50-206ENST00000422489 ADCY3O60266 1144 aa11.22□□□□□ -0.61
NUP50-206ENST00000422489 CYP2D6P10635 497 aa11.22□□□□□ -0.61
NUP50-206ENST00000422489 FLT3LGP49771 235 aa11.22□□□□□ -0.61
NUP50-206ENST00000422489 USP17L2Q6R6M4 530 aa11.22□□□□□ -0.61
NUP50-206ENST00000422489 FEZ1Q99689 392 aa11.22□□□□□ -0.61
NUP50-206ENST00000422489 EHD4Q9H223 541 aa11.22□□□□□ -0.61
NUP50-206ENST00000422489 DCTPP1Q9H773 170 aa11.22□□□□□ -0.61
NUP50-206ENST00000422489 ECHDC1Q9NTX5 307 aa11.22□□□□□ -0.61
NUP50-206ENST00000422489 MBD4O95243 580 aa11.21□□□□□ -0.61
NUP50-206ENST00000422489 CHGBP05060 677 aa11.21□□□□□ -0.61
NUP50-206ENST00000422489 CCL5P13501 91 aa11.21□□□□□ -0.61
NUP50-206ENST00000422489 ELNP15502 786 aa11.21□□□□□ -0.61
NUP50-206ENST00000422489 ADD2P35612 726 aa11.21□□□□□ -0.61
NUP50-206ENST00000422489 EVX2Q03828 476 aa11.21□□□□□ -0.61
NUP50-206ENST00000422489 ZSCAN25Q6NSZ9 544 aa11.21□□□□□ -0.61
NUP50-206ENST00000422489 CCAR1Q8IX12 1150 aaKnown RBP11.21□□□□□ -0.61
NUP50-206ENST00000422489 RNF208Q9H0X6 261 aa11.21□□□□□ -0.61
NUP50-206ENST00000422489 EMILIN3Q9NT22 766 aa11.21□□□□□ -0.61
NUP50-206ENST00000422489 PEX10O60683 326 aa11.2□□□□□ -0.62
NUP50-206ENST00000422489 HOXA7P31268 230 aaPredicted RBP11.2□□□□□ -0.62
NUP50-206ENST00000422489 SHMT1P34896 483 aa11.2□□□□□ -0.62
NUP50-206ENST00000422489 HERVK_113P62684 666 aa11.2□□□□□ -0.62
NUP50-206ENST00000422489 FAM110CQ1W6H9 321 aa11.2□□□□□ -0.62
NUP50-206ENST00000422489 PRPF38BQ5VTL8 546 aaKnown RBP11.2□□□□□ -0.62
NUP50-206ENST00000422489 SLAIN1Q8ND83 568 aa11.2□□□□□ -0.62
NUP50-206ENST00000422489 GPRC5AQ8NFJ5 357 aa11.2□□□□□ -0.62
NUP50-206ENST00000422489 ACER1Q8TDN7 264 aa11.2□□□□□ -0.62
NUP50-206ENST00000422489 DYNLL2Q96FJ2 89 aa11.2□□□□□ -0.62
NUP50-206ENST00000422489 DDRGK1Q96HY6 314 aa11.2□□□□□ -0.62
NUP50-206ENST00000422489 GPATCH3Q96I76 525 aa11.2□□□□□ -0.62
NUP50-206ENST00000422489 PAGR1Q9BTK6 254 aa11.2□□□□□ -0.62
NUP50-206ENST00000422489 DCP1AQ9NPI6 582 aaPredicted RBP11.2□□□□□ -0.62
NUP50-206ENST00000422489 PCDHB15Q9Y5E8 787 aa11.2□□□□□ -0.62
NUP50-206ENST00000422489 SLC4A4Q9Y6R1 1079 aa11.2□□□□□ -0.62
NUP50-206ENST00000422489 DOCK2Q92608 1830 aa11.19□□□□□ -0.62
NUP50-206ENST00000422489 CYP2D7A0A087X1C5 515 aa11.19□□□□□ -0.62
NUP50-206ENST00000422489 USP17L15C9J2P7 530 aa11.19□□□□□ -0.62
NUP50-206ENST00000422489 USP17L13C9JLJ4 530 aa11.19□□□□□ -0.62
NUP50-206ENST00000422489 USP17L11C9JVI0 530 aa11.19□□□□□ -0.62
NUP50-206ENST00000422489 USP17L18D6R9N7 530 aa11.19□□□□□ -0.62
NUP50-206ENST00000422489 USP17L22D6RA61 530 aa11.19□□□□□ -0.62
NUP50-206ENST00000422489 USP17L17D6RBQ6 530 aa11.19□□□□□ -0.62
NUP50-206ENST00000422489 USP17L19D6RCP7 530 aa11.19□□□□□ -0.62
NUP50-206ENST00000422489 USP17L20D6RJB6 530 aa11.19□□□□□ -0.62
NUP50-206ENST00000422489 USP14P54578 494 aa11.19□□□□□ -0.62
NUP50-206ENST00000422489 RRP1P56182 461 aaKnown RBP11.19□□□□□ -0.62
NUP50-206ENST00000422489 USP17L24Q0WX57 530 aa11.19□□□□□ -0.62
NUP50-206ENST00000422489 SEPT2Q15019 361 aa11.19□□□□□ -0.62
NUP50-206ENST00000422489 UBE3CQ15386 1083 aa11.19□□□□□ -0.62
NUP50-206ENST00000422489 Q3C1V9 767 aa11.19□□□□□ -0.62
NUP50-206ENST00000422489 TSHZ3Q63HK5 1081 aa11.19□□□□□ -0.62
NUP50-206ENST00000422489 AMOTL1Q8IY63 956 aa11.19□□□□□ -0.62
NUP50-206ENST00000422489 UNC93B1Q9H1C4 597 aa11.19□□□□□ -0.62
NUP50-206ENST00000422489 CWC22Q9HCG8 908 aaKnown RBP11.19□□□□□ -0.62
NUP50-206ENST00000422489 ATP8A2Q9NTI2 1148 aa11.19□□□□□ -0.62
NUP50-206ENST00000422489 RBPJLQ9UBG7 517 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms