RNA–Protein interactions for RNA: ENST00000411464.3

MRPL55-220, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 767 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-220ENST00000411464 FLT1P17948 1338 aa20.47■□□□□ 0.87
MRPL55-220ENST00000411464 SZT2Q5T011 3432 aa20.47■□□□□ 0.87
MRPL55-220ENST00000411464 SURF6O75683 361 aaKnown RBP20.46■□□□□ 0.87
MRPL55-220ENST00000411464 GDF11O95390 407 aa20.46■□□□□ 0.87
MRPL55-220ENST00000411464 HLA-DOAP06340 250 aa20.46■□□□□ 0.87
MRPL55-220ENST00000411464 JAG1P78504 1218 aa20.46■□□□□ 0.87
MRPL55-220ENST00000411464 POLA2Q14181 598 aa20.46■□□□□ 0.87
MRPL55-220ENST00000411464 PDE3AQ14432 1141 aa20.46■□□□□ 0.87
MRPL55-220ENST00000411464 ADGRA1Q86SQ6 560 aa20.46■□□□□ 0.87
MRPL55-220ENST00000411464 SOCS4Q8WXH5 440 aa20.46■□□□□ 0.87
MRPL55-220ENST00000411464 TRIB2Q92519 343 aa20.46■□□□□ 0.87
MRPL55-220ENST00000411464 DNAJC18Q9H819 358 aa20.46■□□□□ 0.87
MRPL55-220ENST00000411464 PHIPQ8WWQ0 1821 aa20.46■□□□□ 0.87
MRPL55-220ENST00000411464 CCER2I3L3R5 266 aa20.45■□□□□ 0.86
MRPL55-220ENST00000411464 XRCC5P13010 732 aaKnown RBP20.45■□□□□ 0.86
MRPL55-220ENST00000411464 MAPK4P31152 587 aa20.45■□□□□ 0.86
MRPL55-220ENST00000411464 TRMT44Q8IYL2 757 aaKnown RBP20.45■□□□□ 0.86
MRPL55-220ENST00000411464 TMEM57Q8N5G2 664 aa20.45■□□□□ 0.86
MRPL55-220ENST00000411464 ZNF512BQ96KM6 892 aaPredicted RBP20.45■□□□□ 0.86
MRPL55-220ENST00000411464 C11orf49Q9H6J7 331 aa20.45■□□□□ 0.86
MRPL55-220ENST00000411464 TXNRD2Q9NNW7 524 aa20.45■□□□□ 0.86
MRPL55-220ENST00000411464 SAP30BPQ9UHR5 308 aaKnown RBP20.45■□□□□ 0.86
MRPL55-220ENST00000411464 OGDHLQ9ULD0 1010 aa20.45■□□□□ 0.86
MRPL55-220ENST00000411464 PEX10O60683 326 aa20.44■□□□□ 0.86
MRPL55-220ENST00000411464 PRKAR2AP13861 404 aaKnown RBP20.44■□□□□ 0.86
MRPL55-220ENST00000411464 ZAP70P43403 619 aa20.44■□□□□ 0.86
MRPL55-220ENST00000411464 ATP8B2P98198 1209 aa20.44■□□□□ 0.86
MRPL55-220ENST00000411464 ZKSCAN2Q63HK3 967 aa20.44■□□□□ 0.86
MRPL55-220ENST00000411464 GTF3C2Q8WUA4 911 aaPredicted RBP20.44■□□□□ 0.86
MRPL55-220ENST00000411464 RBPJLQ9UBG7 517 aa20.44■□□□□ 0.86
MRPL55-220ENST00000411464 ZBTB21Q9ULJ3 1066 aa20.44■□□□□ 0.86
MRPL55-220ENST00000411464 ZMYND8Q9ULU4 1186 aaPredicted RBP20.44■□□□□ 0.86
MRPL55-220ENST00000411464 PTPRFP10586 1907 aa20.43■□□□□ 0.86
MRPL55-220ENST00000411464 SOX1O00570 391 aaPredicted RBP20.43■□□□□ 0.86
MRPL55-220ENST00000411464 BMP8BP34820 402 aa20.43■□□□□ 0.86
MRPL55-220ENST00000411464 SHROOM1Q2M3G4 852 aaPredicted RBP20.43■□□□□ 0.86
MRPL55-220ENST00000411464 MAP3K21Q5TCX8 1036 aa20.43■□□□□ 0.86
MRPL55-220ENST00000411464 USP17L2Q6R6M4 530 aa20.43■□□□□ 0.86
MRPL55-220ENST00000411464 SSH3Q8TE77 659 aa20.43■□□□□ 0.86
MRPL55-220ENST00000411464 GDF15Q99988 308 aa20.43■□□□□ 0.86
MRPL55-220ENST00000411464 PIH1D3Q9NQM4 214 aaKnown RBP20.43■□□□□ 0.86
MRPL55-220ENST00000411464 ZKSCAN1P17029 563 aaPredicted RBP20.42■□□□□ 0.86
MRPL55-220ENST00000411464 CYP7A1P22680 504 aa20.42■□□□□ 0.86
MRPL55-220ENST00000411464 MNX1P50219 401 aaPredicted RBP20.42■□□□□ 0.86
MRPL55-220ENST00000411464 ERVK-9P63128 1117 aa20.42■□□□□ 0.86
MRPL55-220ENST00000411464 ERVK-24P63145 666 aa20.42■□□□□ 0.86
MRPL55-220ENST00000411464 Q3C1V9 767 aa20.42■□□□□ 0.86
MRPL55-220ENST00000411464 SLC17A8Q8NDX2 589 aa20.42■□□□□ 0.86
MRPL55-220ENST00000411464 LRCH3Q96II8 777 aa20.42■□□□□ 0.86
MRPL55-220ENST00000411464 PAGR1Q9BTK6 254 aa20.42■□□□□ 0.86
MRPL55-220ENST00000411464 CWC22Q9HCG8 908 aaKnown RBP20.42■□□□□ 0.86
MRPL55-220ENST00000411464 GH2P01242 217 aa20.41■□□□□ 0.86
MRPL55-220ENST00000411464 RGS2P41220 211 aa20.41■□□□□ 0.86
MRPL55-220ENST00000411464 USP5P45974 858 aa20.41■□□□□ 0.86
MRPL55-220ENST00000411464 DYNLL1P63167 89 aaKnown RBP20.41■□□□□ 0.86
MRPL55-220ENST00000411464 CERS3Q8IU89 383 aa20.41■□□□□ 0.86
MRPL55-220ENST00000411464 EMILIN3Q9NT22 766 aa20.41■□□□□ 0.86
MRPL55-220ENST00000411464 LOC285556D6RIA3 1793 aa20.4■□□□□ 0.86
MRPL55-220ENST00000411464 IDH1O75874 414 aaKnown RBP20.4■□□□□ 0.86
MRPL55-220ENST00000411464 SYN1P17600 705 aa20.4■□□□□ 0.86
MRPL55-220ENST00000411464 CACNB2Q08289 660 aaPredicted RBP20.4■□□□□ 0.86
MRPL55-220ENST00000411464 GPR142Q7Z601 462 aa20.4■□□□□ 0.86
MRPL55-220ENST00000411464 PLEKHH3Q7Z736 793 aa20.4■□□□□ 0.86
MRPL55-220ENST00000411464 FEZ1Q99689 392 aa20.4■□□□□ 0.86
MRPL55-220ENST00000411464 PORCNQ9H237 461 aa20.4■□□□□ 0.86
MRPL55-220ENST00000411464 DBNLQ9UJU6 430 aaKnown RBP20.4■□□□□ 0.86
MRPL55-220ENST00000411464 MIGA1Q8NAN2 632 aa20.39■□□□□ 0.85
MRPL55-220ENST00000411464 USP6NLQ92738 828 aa20.39■□□□□ 0.85
MRPL55-220ENST00000411464 CCDC8Q9H0W5 538 aaPredicted RBP20.39■□□□□ 0.85
MRPL55-220ENST00000411464 C1orf115Q9H7X2 142 aa20.39■□□□□ 0.85
MRPL55-220ENST00000411464 NOP58Q9Y2X3 529 aaKnown RBP20.39■□□□□ 0.85
MRPL55-220ENST00000411464 USP17L15C9J2P7 530 aa20.38■□□□□ 0.85
MRPL55-220ENST00000411464 USP17L13C9JLJ4 530 aa20.38■□□□□ 0.85
MRPL55-220ENST00000411464 USP17L11C9JVI0 530 aa20.38■□□□□ 0.85
MRPL55-220ENST00000411464 USP17L18D6R9N7 530 aa20.38■□□□□ 0.85
MRPL55-220ENST00000411464 USP17L22D6RA61 530 aa20.38■□□□□ 0.85
MRPL55-220ENST00000411464 USP17L17D6RBQ6 530 aa20.38■□□□□ 0.85
MRPL55-220ENST00000411464 USP17L19D6RCP7 530 aa20.38■□□□□ 0.85
MRPL55-220ENST00000411464 USP17L20D6RJB6 530 aa20.38■□□□□ 0.85
MRPL55-220ENST00000411464 GLRX3O76003 335 aaKnown RBP20.38■□□□□ 0.85
MRPL55-220ENST00000411464 CCNA1P78396 465 aa20.38■□□□□ 0.85
MRPL55-220ENST00000411464 USP17L24Q0WX57 530 aa20.38■□□□□ 0.85
MRPL55-220ENST00000411464 ZYXQ15942 572 aaKnown RBP20.38■□□□□ 0.85
MRPL55-220ENST00000411464 MORN1Q5T089 497 aa20.38■□□□□ 0.85
MRPL55-220ENST00000411464 TATDN1Q6P1N9 297 aa20.38■□□□□ 0.85
MRPL55-220ENST00000411464 FTSJ3Q8IY81 847 aaKnown RBP20.38■□□□□ 0.85
MRPL55-220ENST00000411464 SERPINB13Q9UIV8 391 aa20.38■□□□□ 0.85
MRPL55-220ENST00000411464 RABGAP1Q9Y3P9 1069 aa20.38■□□□□ 0.85
MRPL55-220ENST00000411464 MAGEA10P43363 369 aaPredicted RBP20.37■□□□□ 0.85
MRPL55-220ENST00000411464 USP14P54578 494 aa20.37■□□□□ 0.85
MRPL55-220ENST00000411464 RAB3GAP1Q15042 981 aa20.37■□□□□ 0.85
MRPL55-220ENST00000411464 CCL14Q16627 93 aa20.37■□□□□ 0.85
MRPL55-220ENST00000411464 TTC6Q86TZ1 520 aa20.37■□□□□ 0.85
MRPL55-220ENST00000411464 MAGEB6Q8N7X4 407 aa20.37■□□□□ 0.85
MRPL55-220ENST00000411464 APBA2Q99767 749 aa20.37■□□□□ 0.85
MRPL55-220ENST00000411464 TLR7Q9NYK1 1049 aaKnown RBP20.37■□□□□ 0.85
MRPL55-220ENST00000411464 DOCK3Q8IZD9 2030 aa20.36■□□□□ 0.85
MRPL55-220ENST00000411464 CCND3P30281 292 aaPredicted RBP20.36■□□□□ 0.85
MRPL55-220ENST00000411464 MAP3K12Q12852 859 aa20.36■□□□□ 0.85
MRPL55-220ENST00000411464 CERKLQ49MI3 558 aaPredicted RBP20.36■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 77.9 ms