RNA–Protein interactions for RNA: ENST00000409475.5

PGAP1-204, Transcript of post-GPI attachment to proteins 1, humanhuman

TSL 2 BASIC

Gene PGAP1, Length 2,443 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGAP1-204ENST00000409475 ZNF274Q96GC6 653 aaPredicted RBP23.12■■□□□ 1.29
PGAP1-204ENST00000409475 HERC5Q9UII4 1024 aaKnown RBP23.12■■□□□ 1.29
PGAP1-204ENST00000409475 PITPNM2Q9BZ72 1349 aa23.12■■□□□ 1.29
PGAP1-204ENST00000409475 SHMT1P34896 483 aa23.11■■□□□ 1.29
PGAP1-204ENST00000409475 SEC23AQ15436 765 aa23.11■■□□□ 1.29
PGAP1-204ENST00000409475 CRACR2BQ8N4Y2 399 aaPredicted RBP23.11■■□□□ 1.29
PGAP1-204ENST00000409475 CSRNP1Q96S65 589 aa23.11■■□□□ 1.29
PGAP1-204ENST00000409475 GREB1LQ9C091 1923 aaPredicted RBP23.11■■□□□ 1.29
PGAP1-204ENST00000409475 HIRAP54198 1017 aaPredicted RBP23.11■■□□□ 1.29
PGAP1-204ENST00000409475 TFAP4Q01664 338 aa23.11■■□□□ 1.29
PGAP1-204ENST00000409475 TBC1D12O60347 775 aa23.1■■□□□ 1.29
PGAP1-204ENST00000409475 ME3Q16798 604 aa23.1■■□□□ 1.29
PGAP1-204ENST00000409475 FAM47AQ5JRC9 791 aa23.1■■□□□ 1.29
PGAP1-204ENST00000409475 NEDD1Q8NHV4 660 aa23.1■■□□□ 1.29
PGAP1-204ENST00000409475 TRIM34Q9BYJ4 488 aa23.1■■□□□ 1.29
PGAP1-204ENST00000409475 DNAJC18Q9H819 358 aa23.1■■□□□ 1.29
PGAP1-204ENST00000409475 GPHNQ9NQX3 736 aaPredicted RBP23.1■■□□□ 1.29
PGAP1-204ENST00000409475 ASTN2O75129 1339 aaPredicted RBP23.1■■□□□ 1.29
PGAP1-204ENST00000409475 APOBRQ0VD83 1088 aa23.1■■□□□ 1.29
PGAP1-204ENST00000409475 RASA3Q14644 834 aa23.1■■□□□ 1.29
PGAP1-204ENST00000409475 WTAPQ15007 396 aa23.1■■□□□ 1.29
PGAP1-204ENST00000409475 TATDN1Q6P1N9 297 aa23.1■■□□□ 1.29
PGAP1-204ENST00000409475 USP50Q70EL3 339 aaPredicted RBP23.1■■□□□ 1.29
PGAP1-204ENST00000409475 CCDC17Q96LX7 622 aa23.1■■□□□ 1.29
PGAP1-204ENST00000409475 TMEM39BQ9GZU3 492 aa23.1■■□□□ 1.29
PGAP1-204ENST00000409475 PPP2R3BQ9Y5P8 575 aa23.1■■□□□ 1.29
PGAP1-204ENST00000409475 TNKSO95271 1327 aa23.1■■□□□ 1.29
PGAP1-204ENST00000409475 TSPY3P0CV98 308 aa23.09■■□□□ 1.29
PGAP1-204ENST00000409475 TSPY8P0CW00 308 aa23.09■■□□□ 1.29
PGAP1-204ENST00000409475 INTS4Q96HW7 963 aaKnown RBP23.09■■□□□ 1.29
PGAP1-204ENST00000409475 LARP6Q9BRS8 491 aaKnown RBP23.09■■□□□ 1.29
PGAP1-204ENST00000409475 LARGE1O95461 756 aa23.09■■□□□ 1.29
PGAP1-204ENST00000409475 MAP3K10Q02779 954 aa23.09■■□□□ 1.29
PGAP1-204ENST00000409475 ANGEL2Q5VTE6 544 aaKnown RBP23.09■■□□□ 1.29
PGAP1-204ENST00000409475 ANKS1AQ92625 1134 aa23.09■■□□□ 1.29
PGAP1-204ENST00000409475 IQCA1LA6NCM1 817 aa23.08■■□□□ 1.29
PGAP1-204ENST00000409475 ENAHQ8N8S7 591 aaPredicted RBP23.08■■□□□ 1.29
PGAP1-204ENST00000409475 ZKSCAN3Q9BRR0 538 aa23.08■■□□□ 1.29
PGAP1-204ENST00000409475 PFKFB2O60825 505 aa23.08■■□□□ 1.28
PGAP1-204ENST00000409475 TEPSINQ96N21 525 aa23.08■■□□□ 1.28
PGAP1-204ENST00000409475 BRPF3Q9ULD4 1205 aa23.08■■□□□ 1.28
PGAP1-204ENST00000409475 DGKHQ86XP1 1220 aa23.07■■□□□ 1.28
PGAP1-204ENST00000409475 CHMP4CQ96CF2 233 aa23.07■■□□□ 1.28
PGAP1-204ENST00000409475 GGA3Q9NZ52 723 aa23.07■■□□□ 1.28
PGAP1-204ENST00000409475 KLF18A0A0U1RQI7 1052 aa23.07■■□□□ 1.28
PGAP1-204ENST00000409475 PDIA3P30101 505 aaKnown RBP23.07■■□□□ 1.28
PGAP1-204ENST00000409475 RCAN1P53805 252 aa23.07■■□□□ 1.28
PGAP1-204ENST00000409475 DEFB129Q9H1M3 183 aa23.07■■□□□ 1.28
PGAP1-204ENST00000409475 CCDC69A6NI79 296 aa23.06■■□□□ 1.28
PGAP1-204ENST00000409475 HSP90AA1P07900 732 aaKnown RBP23.06■■□□□ 1.28
PGAP1-204ENST00000409475 EPHX2P34913 555 aa23.06■■□□□ 1.28
PGAP1-204ENST00000409475 NOVP48745 357 aa23.06■■□□□ 1.28
PGAP1-204ENST00000409475 NID2Q14112 1375 aa23.06■■□□□ 1.28
PGAP1-204ENST00000409475 IL17RBQ9NRM6 502 aa23.06■■□□□ 1.28
PGAP1-204ENST00000409475 NFXL1Q6ZNB6 911 aa23.06■■□□□ 1.28
PGAP1-204ENST00000409475 ZC3H15Q8WU90 426 aaKnown RBP23.06■■□□□ 1.28
PGAP1-204ENST00000409475 GTF3C6Q969F1 213 aa23.06■■□□□ 1.28
PGAP1-204ENST00000409475 SLKQ9H2G2 1235 aaPredicted RBP23.06■■□□□ 1.28
PGAP1-204ENST00000409475 XPO5Q9HAV4 1204 aaKnown RBP eCLIP23.06■■□□□ 1.28
PGAP1-204ENST00000409475 IGKV6D-41A0A0C4DH26 115 aa23.05■■□□□ 1.28
PGAP1-204ENST00000409475 IFIT1BQ5T764 474 aaKnown RBP23.05■■□□□ 1.28
PGAP1-204ENST00000409475 APOA5Q6Q788 366 aa23.05■■□□□ 1.28
PGAP1-204ENST00000409475 HOOK2Q96ED9 719 aa23.05■■□□□ 1.28
PGAP1-204ENST00000409475 SENP2Q9HC62 589 aa23.05■■□□□ 1.28
PGAP1-204ENST00000409475 AKR1B1P15121 316 aa23.04■■□□□ 1.28
PGAP1-204ENST00000409475 CERKLQ49MI3 558 aaPredicted RBP23.04■■□□□ 1.28
PGAP1-204ENST00000409475 PPP4R3BQ5MIZ7 849 aa23.04■■□□□ 1.28
PGAP1-204ENST00000409475 ST3GAL1Q11201 340 aa23.04■■□□□ 1.28
PGAP1-204ENST00000409475 RCSD1Q6JBY9 416 aa23.04■■□□□ 1.28
PGAP1-204ENST00000409475 GNL3Q9BVP2 549 aaKnown RBP eCLIP23.04■■□□□ 1.28
PGAP1-204ENST00000409475 SLC12A7Q9Y666 1083 aa23.04■■□□□ 1.28
PGAP1-204ENST00000409475 GOLGA8BA8MQT2 603 aa23.03■■□□□ 1.28
PGAP1-204ENST00000409475 SYNE3Q6ZMZ3 975 aa23.03■■□□□ 1.28
PGAP1-204ENST00000409475 TAF1DQ9H5J8 278 aaPredicted RBP23.03■■□□□ 1.28
PGAP1-204ENST00000409475 HPS5Q9UPZ3 1129 aa23.03■■□□□ 1.28
PGAP1-204ENST00000409475 ZSCAN21Q9Y5A6 473 aaPredicted RBP23.03■■□□□ 1.28
PGAP1-204ENST00000409475 NMT2O60551 498 aa23.03■■□□□ 1.28
PGAP1-204ENST00000409475 CCDC83Q8IWF9 413 aa23.03■■□□□ 1.28
PGAP1-204ENST00000409475 CDAN1Q8IWY9 1227 aa23.03■■□□□ 1.28
PGAP1-204ENST00000409475 FAM196BA6NMK8 535 aa23.02■■□□□ 1.28
PGAP1-204ENST00000409475 POTECB2RU33 542 aa23.02■■□□□ 1.28
PGAP1-204ENST00000409475 NECAB1Q8N987 351 aa23.02■■□□□ 1.28
PGAP1-204ENST00000409475 ZBTB43O43298 467 aa23.02■■□□□ 1.28
PGAP1-204ENST00000409475 SCRN1Q12765 414 aa23.02■■□□□ 1.28
PGAP1-204ENST00000409475 STK3Q13188 491 aa23.02■■□□□ 1.28
PGAP1-204ENST00000409475 ZNF654Q8IZM8 581 aa23.02■■□□□ 1.28
PGAP1-204ENST00000409475 DCPSQ96C86 337 aaKnown RBP23.02■■□□□ 1.28
PGAP1-204ENST00000409475 CWC22Q9HCG8 908 aaKnown RBP23.02■■□□□ 1.28
PGAP1-204ENST00000409475 SLURP2P0DP57 97 aa23.01■■□□□ 1.27
PGAP1-204ENST00000409475 PNMA8AQ86V59 439 aaPredicted RBP23.01■■□□□ 1.27
PGAP1-204ENST00000409475 LLPHQ9BRT6 129 aaKnown RBP23.01■■□□□ 1.27
PGAP1-204ENST00000409475 POLR2AP24928 1970 aaKnown RBP23.01■■□□□ 1.27
PGAP1-204ENST00000409475 DDAH1O94760 285 aa23.01■■□□□ 1.27
PGAP1-204ENST00000409475 CALM1P0DP23 149 aa23.01■■□□□ 1.27
PGAP1-204ENST00000409475 CALM2P0DP24 149 aa23.01■■□□□ 1.27
PGAP1-204ENST00000409475 CALM3P0DP25 149 aa23.01■■□□□ 1.27
PGAP1-204ENST00000409475 TMEM179Q6ZVK1 233 aa23.01■■□□□ 1.27
PGAP1-204ENST00000409475 CATIPQ7Z7H3 387 aa23.01■■□□□ 1.27
PGAP1-204ENST00000409475 MTMR4Q9NYA4 1195 aa23.01■■□□□ 1.27
PGAP1-204ENST00000409475 NAP1L2Q9ULW6 460 aaPredicted RBP23.01■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms