RNA–Protein interactions for RNA: ENST00000409416.5

COL6A2-204, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,430 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-204ENST00000409416 TBC1D9BQ66K14 1250 aa15.28■□□□□ 0.04
COL6A2-204ENST00000409416 TXNRD3Q86VQ6 643 aa15.28■□□□□ 0.04
COL6A2-204ENST00000409416 ST7Q9NRC1 585 aa15.28■□□□□ 0.04
COL6A2-204ENST00000409416 ZNF652Q9Y2D9 606 aa15.28■□□□□ 0.04
COL6A2-204ENST00000409416 RBM6P78332 1123 aaKnown RBP15.28■□□□□ 0.04
COL6A2-204ENST00000409416 RAD51AP2Q09MP3 1159 aa15.28■□□□□ 0.04
COL6A2-204ENST00000409416 SLC39A14Q15043 492 aa15.28■□□□□ 0.04
COL6A2-204ENST00000409416 SHC4Q6S5L8 630 aa15.28■□□□□ 0.04
COL6A2-204ENST00000409416 CHD2O14647 1828 aaKnown RBP15.27■□□□□ 0.04
COL6A2-204ENST00000409416 MYL5Q02045 173 aa15.27■□□□□ 0.04
COL6A2-204ENST00000409416 ARHGAP29Q52LW3 1261 aa15.27■□□□□ 0.04
COL6A2-204ENST00000409416 ZNF397Q8NF99 534 aaPredicted RBP15.27■□□□□ 0.04
COL6A2-204ENST00000409416 ZMYM6O95789 1325 aa15.27■□□□□ 0.04
COL6A2-204ENST00000409416 PATL2C9JE40 543 aaKnown RBP15.27■□□□□ 0.04
COL6A2-204ENST00000409416 AXDND1Q5T1B0 1012 aaPredicted RBP15.27■□□□□ 0.04
COL6A2-204ENST00000409416 ESR2Q92731 530 aa15.27■□□□□ 0.04
COL6A2-204ENST00000409416 POLD4Q9HCU8 107 aa15.27■□□□□ 0.04
COL6A2-204ENST00000409416 USP17L3A6NCW0 530 aa15.27■□□□□ 0.03
COL6A2-204ENST00000409416 USP17L4A6NCW7 530 aa15.27■□□□□ 0.03
COL6A2-204ENST00000409416 PRR29P0C7W0 189 aa15.27■□□□□ 0.03
COL6A2-204ENST00000409416 VEGFAP15692 232 aaPredicted RBP15.27■□□□□ 0.03
COL6A2-204ENST00000409416 IL6STP40189 918 aaPredicted RBP15.27■□□□□ 0.03
COL6A2-204ENST00000409416 NYAP1Q6ZVC0 841 aa15.27■□□□□ 0.03
COL6A2-204ENST00000409416 USP17L1Q7RTZ2 530 aa15.27■□□□□ 0.03
COL6A2-204ENST00000409416 ERO1AQ96HE7 468 aa15.27■□□□□ 0.03
COL6A2-204ENST00000409416 UBXN4Q92575 508 aa15.26■□□□□ 0.03
COL6A2-204ENST00000409416 FEZ1Q99689 392 aa15.26■□□□□ 0.03
COL6A2-204ENST00000409416 SLIT3O75094 1523 aa15.26■□□□□ 0.03
COL6A2-204ENST00000409416 GSG1L2A8MUP6 293 aa15.26■□□□□ 0.03
COL6A2-204ENST00000409416 XBP1P17861 261 aa15.26■□□□□ 0.03
COL6A2-204ENST00000409416 TEX35Q5T0J7 233 aa15.26■□□□□ 0.03
COL6A2-204ENST00000409416 SMARCE1Q969G3 411 aa15.26■□□□□ 0.03
COL6A2-204ENST00000409416 UBA5Q9GZZ9 404 aa15.26■□□□□ 0.03
COL6A2-204ENST00000409416 VPS16Q9H269 839 aa15.26■□□□□ 0.03
COL6A2-204ENST00000409416 SH2B2O14492 632 aaPredicted RBP15.26■□□□□ 0.03
COL6A2-204ENST00000409416 SCNN1DP51172 638 aa15.26■□□□□ 0.03
COL6A2-204ENST00000409416 AK7Q96M32 723 aa15.26■□□□□ 0.03
COL6A2-204ENST00000409416 FAM196BA6NMK8 535 aa15.25■□□□□ 0.03
COL6A2-204ENST00000409416 POLR3GO15318 223 aaPredicted RBP15.25■□□□□ 0.03
COL6A2-204ENST00000409416 TCP10Q12799 353 aa15.25■□□□□ 0.03
COL6A2-204ENST00000409416 SCAF8Q9UPN6 1271 aaKnown RBP15.25■□□□□ 0.03
COL6A2-204ENST00000409416 NFE2L3Q9Y4A8 694 aa15.25■□□□□ 0.03
COL6A2-204ENST00000409416 GNG11P61952 73 aa15.25■□□□□ 0.03
COL6A2-204ENST00000409416 TFAP4Q01664 338 aa15.25■□□□□ 0.03
COL6A2-204ENST00000409416 ZNF444Q8N0Y2 327 aaPredicted RBP15.25■□□□□ 0.03
COL6A2-204ENST00000409416 KRT222Q8N1A0 295 aa15.25■□□□□ 0.03
COL6A2-204ENST00000409416 FANCBQ8NB91 859 aa15.25■□□□□ 0.03
COL6A2-204ENST00000409416 NBPF3Q9H094 633 aa15.25■□□□□ 0.03
COL6A2-204ENST00000409416 IMPACTQ9P2X3 320 aa15.25■□□□□ 0.03
COL6A2-204ENST00000409416 CBFA2T2O43439 604 aa15.24■□□□□ 0.03
COL6A2-204ENST00000409416 HIBADHP31937 336 aaKnown RBP15.24■□□□□ 0.03
COL6A2-204ENST00000409416 RPS8P62241 208 aaKnown RBP15.24■□□□□ 0.03
COL6A2-204ENST00000409416 IPO4Q8TEX9 1081 aaKnown RBP15.24■□□□□ 0.03
COL6A2-204ENST00000409416 PLEKHA4Q9H4M7 779 aa15.24■□□□□ 0.03
COL6A2-204ENST00000409416 BRMS1Q9HCU9 246 aa15.24■□□□□ 0.03
COL6A2-204ENST00000409416 SAMSN1Q9NSI8 373 aaKnown RBP15.24■□□□□ 0.03
COL6A2-204ENST00000409416 IDEP14735 1019 aa15.24■□□□□ 0.03
COL6A2-204ENST00000409416 CACNB3P54284 484 aa15.24■□□□□ 0.03
COL6A2-204ENST00000409416 RPGRQ92834 1020 aaKnown RBP15.24■□□□□ 0.03
COL6A2-204ENST00000409416 CARD6Q9BX69 1037 aa15.24■□□□□ 0.03
COL6A2-204ENST00000409416 GTPBP4Q9BZE4 634 aaKnown RBP15.24■□□□□ 0.03
COL6A2-204ENST00000409416 TSPY3P0CV98 308 aa15.24■□□□□ 0.03
COL6A2-204ENST00000409416 TSPY8P0CW00 308 aa15.24■□□□□ 0.03
COL6A2-204ENST00000409416 CSRNP2Q9H175 543 aa15.24■□□□□ 0.03
COL6A2-204ENST00000409416 MRC1P22897 1456 aa15.24■□□□□ 0.03
COL6A2-204ENST00000409416 CAMTA1Q9Y6Y1 1673 aa15.23■□□□□ 0.03
COL6A2-204ENST00000409416 PP2D1A8MPX8 630 aa15.23■□□□□ 0.03
COL6A2-204ENST00000409416 KIF2AO00139 706 aaPredicted RBP15.23■□□□□ 0.03
COL6A2-204ENST00000409416 NCAPHQ15003 741 aa15.23■□□□□ 0.03
COL6A2-204ENST00000409416 DOK7Q18PE1 504 aa15.23■□□□□ 0.03
COL6A2-204ENST00000409416 RRAGBQ5VZM2 374 aa15.23■□□□□ 0.03
COL6A2-204ENST00000409416 KRI1Q8N9T8 703 aaKnown RBP15.23■□□□□ 0.03
COL6A2-204ENST00000409416 DRC1Q96MC2 740 aa15.23■□□□□ 0.03
COL6A2-204ENST00000409416 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.23■□□□□ 0.03
COL6A2-204ENST00000409416 KRT23Q9C075 422 aa15.23■□□□□ 0.03
COL6A2-204ENST00000409416 OSBPL5Q9H0X9 879 aaPredicted RBP15.23■□□□□ 0.03
COL6A2-204ENST00000409416 KAT14Q9H8E8 782 aa15.23■□□□□ 0.03
COL6A2-204ENST00000409416 HOOK1Q9UJC3 728 aaKnown RBP15.23■□□□□ 0.03
COL6A2-204ENST00000409416 PDE4BQ07343 736 aa15.23■□□□□ 0.03
COL6A2-204ENST00000409416 MXD3Q9BW11 206 aa15.23■□□□□ 0.03
COL6A2-204ENST00000409416 LY9Q9HBG7 655 aa15.23■□□□□ 0.03
COL6A2-204ENST00000409416 DDX41Q9UJV9 622 aaKnown RBP15.23■□□□□ 0.03
COL6A2-204ENST00000409416 RTCBQ9Y3I0 505 aaKnown RBP15.23■□□□□ 0.03
COL6A2-204ENST00000409416 FRMPD2Q68DX3 1309 aaPredicted RBP15.23■□□□□ 0.03
COL6A2-204ENST00000409416 TRIM75PA6NK02 468 aa15.23■□□□□ 0.03
COL6A2-204ENST00000409416 JAKMIP3Q5VZ66 844 aa15.23■□□□□ 0.03
COL6A2-204ENST00000409416 FAM196AQ6ZSG2 479 aa15.23■□□□□ 0.03
COL6A2-204ENST00000409416 METTL16Q86W50 562 aaKnown RBP15.23■□□□□ 0.03
COL6A2-204ENST00000409416 AMOTL1Q8IY63 956 aa15.23■□□□□ 0.03
COL6A2-204ENST00000409416 GPCPD1Q9NPB8 672 aa15.23■□□□□ 0.03
COL6A2-204ENST00000409416 KRBA2Q6ZNG9 492 aa15.22■□□□□ 0.03
COL6A2-204ENST00000409416 UFL1O94874 794 aa15.22■□□□□ 0.03
COL6A2-204ENST00000409416 LETM2Q2VYF4 491 aa15.22■□□□□ 0.03
COL6A2-204ENST00000409416 NOSTRINQ8IVI9 506 aa15.22■□□□□ 0.03
COL6A2-204ENST00000409416 PUF60Q9UHX1 559 aaKnown RBP15.22■□□□□ 0.03
COL6A2-204ENST00000409416 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.22■□□□□ 0.03
COL6A2-204ENST00000409416 NFIXQ14938 502 aa15.21■□□□□ 0.03
COL6A2-204ENST00000409416 CCDC194A0A1B0GVG4 234 aa15.21■□□□□ 0.03
COL6A2-204ENST00000409416 MECOMQ03112 1051 aa15.21■□□□□ 0.03
COL6A2-204ENST00000409416 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms