RNA–Protein interactions for RNA: ENST00000409031.5

SMPD4-202, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD4, Length 4,896 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-202ENST00000409031 KIF2CQ99661 725 aa19.68■□□□□ 0.74
SMPD4-202ENST00000409031 VAT1LQ9HCJ6 419 aa19.68■□□□□ 0.74
SMPD4-202ENST00000409031 PHF8Q9UPP1 1060 aa19.68■□□□□ 0.74
SMPD4-202ENST00000409031 ZBTB22O15209 634 aa19.68■□□□□ 0.74
SMPD4-202ENST00000409031 KIF1CO43896 1103 aaKnown RBP19.68■□□□□ 0.74
SMPD4-202ENST00000409031 DNM2P50570 870 aa19.68■□□□□ 0.74
SMPD4-202ENST00000409031 SEL1L2Q5TEA6 688 aa19.68■□□□□ 0.74
SMPD4-202ENST00000409031 A0A0D9SFI3 127 aa19.68■□□□□ 0.74
SMPD4-202ENST00000409031 B4E1Z4 1266 aa19.68■□□□□ 0.74
SMPD4-202ENST00000409031 GYS2P54840 703 aa19.68■□□□□ 0.74
SMPD4-202ENST00000409031 FYB2Q5VWT5 728 aa19.68■□□□□ 0.74
SMPD4-202ENST00000409031 CEP128Q6ZU80 1094 aa19.68■□□□□ 0.74
SMPD4-202ENST00000409031 HEATR3Q7Z4Q2 680 aa19.68■□□□□ 0.74
SMPD4-202ENST00000409031 SRLQ86TD4 932 aa19.68■□□□□ 0.74
SMPD4-202ENST00000409031 POLR3EQ9NVU0 708 aa19.68■□□□□ 0.74
SMPD4-202ENST00000409031 CYP7A1P22680 504 aa19.67■□□□□ 0.74
SMPD4-202ENST00000409031 CLUL1Q15846 466 aa19.67■□□□□ 0.74
SMPD4-202ENST00000409031 RAB3IPQ96QF0 476 aaPredicted RBP19.67■□□□□ 0.74
SMPD4-202ENST00000409031 CRNKL1Q9BZJ0 848 aaKnown RBP19.67■□□□□ 0.74
SMPD4-202ENST00000409031 ZCCHC17Q9NP64 241 aaKnown RBP19.67■□□□□ 0.74
SMPD4-202ENST00000409031 TRAF5O00463 557 aa19.67■□□□□ 0.74
SMPD4-202ENST00000409031 HOMER3Q9NSC5 361 aa19.67■□□□□ 0.74
SMPD4-202ENST00000409031 PPP2R5BQ15173 497 aa19.67■□□□□ 0.74
SMPD4-202ENST00000409031 C6orf50Q9HD87 102 aa19.67■□□□□ 0.74
SMPD4-202ENST00000409031 LRRD1A4D1F6 860 aa19.67■□□□□ 0.74
SMPD4-202ENST00000409031 ZKSCAN8Q15776 578 aaPredicted RBP19.67■□□□□ 0.74
SMPD4-202ENST00000409031 SV2BQ7L1I2 683 aa19.67■□□□□ 0.74
SMPD4-202ENST00000409031 ZNF526Q8TF50 670 aaPredicted RBP19.67■□□□□ 0.74
SMPD4-202ENST00000409031 MCUR1Q96AQ8 359 aa19.67■□□□□ 0.74
SMPD4-202ENST00000409031 KCNJ18B7U540 433 aa19.66■□□□□ 0.74
SMPD4-202ENST00000409031 RGS16O15492 202 aaPredicted RBP19.66■□□□□ 0.74
SMPD4-202ENST00000409031 KCNJ12Q14500 433 aa19.66■□□□□ 0.74
SMPD4-202ENST00000409031 TTC38Q5R3I4 469 aa19.66■□□□□ 0.74
SMPD4-202ENST00000409031 RAB17Q9H0T7 212 aa19.66■□□□□ 0.74
SMPD4-202ENST00000409031 STX8Q9UNK0 236 aa19.66■□□□□ 0.74
SMPD4-202ENST00000409031 ATP6V0A2Q9Y487 856 aa19.66■□□□□ 0.74
SMPD4-202ENST00000409031 KIF21AQ7Z4S6 1674 aa19.66■□□□□ 0.74
SMPD4-202ENST00000409031 ABCC1P33527 1531 aa19.66■□□□□ 0.74
SMPD4-202ENST00000409031 SLC39A14Q15043 492 aa19.66■□□□□ 0.74
SMPD4-202ENST00000409031 ARHGEF2Q92974 986 aaKnown RBP19.66■□□□□ 0.74
SMPD4-202ENST00000409031 GBP5Q96PP8 586 aa19.66■□□□□ 0.74
SMPD4-202ENST00000409031 ZNF518AQ6AHZ1 1483 aa19.66■□□□□ 0.74
SMPD4-202ENST00000409031 DENND2CQ68D51 928 aa19.66■□□□□ 0.74
SMPD4-202ENST00000409031 TRIM31Q9BZY9 425 aa19.66■□□□□ 0.74
SMPD4-202ENST00000409031 ZKSCAN7Q9P0L1 754 aaPredicted RBP19.66■□□□□ 0.74
SMPD4-202ENST00000409031 RPSAP08865 295 aaKnown RBP19.65■□□□□ 0.74
SMPD4-202ENST00000409031 E2F5Q15329 346 aa19.65■□□□□ 0.74
SMPD4-202ENST00000409031 PLEKHA4Q9H4M7 779 aa19.65■□□□□ 0.74
SMPD4-202ENST00000409031 STK38LQ9Y2H1 464 aa19.65■□□□□ 0.74
SMPD4-202ENST00000409031 H7C1D1 291 aa19.65■□□□□ 0.74
SMPD4-202ENST00000409031 CASP14P31944 242 aa19.65■□□□□ 0.74
SMPD4-202ENST00000409031 BEND3Q5T5X7 828 aa19.65■□□□□ 0.74
SMPD4-202ENST00000409031 KCTD16Q68DU8 428 aa19.65■□□□□ 0.74
SMPD4-202ENST00000409031 GSTA5Q7RTV2 222 aa19.65■□□□□ 0.74
SMPD4-202ENST00000409031 PHKBQ93100 1093 aa19.65■□□□□ 0.74
SMPD4-202ENST00000409031 PRDM4Q9UKN5 801 aa19.65■□□□□ 0.74
SMPD4-202ENST00000409031 HDAC9Q9UKV0 1011 aa19.65■□□□□ 0.74
SMPD4-202ENST00000409031 FAM169AQ9Y6X4 670 aa19.65■□□□□ 0.74
SMPD4-202ENST00000409031 PLCH2O75038 1416 aa19.65■□□□□ 0.74
SMPD4-202ENST00000409031 NAPAP54920 295 aa19.65■□□□□ 0.74
SMPD4-202ENST00000409031 TTC19Q6DKK2 380 aaPredicted RBP19.65■□□□□ 0.74
SMPD4-202ENST00000409031 PROSER2Q86WR7 435 aaPredicted RBP19.65■□□□□ 0.74
SMPD4-202ENST00000409031 CCDC110Q8TBZ0 833 aa19.65■□□□□ 0.74
SMPD4-202ENST00000409031 ARID4AP29374 1257 aaPredicted RBP19.65■□□□□ 0.74
SMPD4-202ENST00000409031 SCRN1Q12765 414 aa19.65■□□□□ 0.74
SMPD4-202ENST00000409031 CCDC144BQ3MJ40 725 aa19.65■□□□□ 0.74
SMPD4-202ENST00000409031 CCDC174Q6PII3 467 aa19.65■□□□□ 0.74
SMPD4-202ENST00000409031 PLIN2Q99541 437 aa19.65■□□□□ 0.74
SMPD4-202ENST00000409031 TEX13AQ9BXU3 409 aaPredicted RBP19.65■□□□□ 0.74
SMPD4-202ENST00000409031 VCX3BQ9H321 246 aa19.65■□□□□ 0.74
SMPD4-202ENST00000409031 CLIC4Q9Y696 253 aa19.65■□□□□ 0.74
SMPD4-202ENST00000409031 TIMM10P62072 90 aa19.64■□□□□ 0.74
SMPD4-202ENST00000409031 ASIC2Q16515 512 aa19.64■□□□□ 0.74
SMPD4-202ENST00000409031 PPP2R5EQ16537 467 aa19.64■□□□□ 0.74
SMPD4-202ENST00000409031 ALS2CLQ60I27 953 aa19.64■□□□□ 0.74
SMPD4-202ENST00000409031 SYCE1Q8N0S2 351 aa19.64■□□□□ 0.74
SMPD4-202ENST00000409031 C19orf44Q9H6X5 657 aa19.64■□□□□ 0.74
SMPD4-202ENST00000409031 KLHL14Q9P2G3 628 aa19.64■□□□□ 0.74
SMPD4-202ENST00000409031 SH2D4BQ5SQS7 431 aa19.64■□□□□ 0.73
SMPD4-202ENST00000409031 FBXO31Q5XUX0 539 aaPredicted RBP19.64■□□□□ 0.73
SMPD4-202ENST00000409031 TYW1BQ6NUM6 668 aa19.64■□□□□ 0.73
SMPD4-202ENST00000409031 PRDM11Q9NQV5 511 aa19.64■□□□□ 0.73
SMPD4-202ENST00000409031 SERPINA10Q9UK55 444 aa19.64■□□□□ 0.73
SMPD4-202ENST00000409031 SLFN14P0C7P3 912 aa19.64■□□□□ 0.73
SMPD4-202ENST00000409031 MORC3Q14149 939 aa19.64■□□□□ 0.73
SMPD4-202ENST00000409031 C2CD5Q86YS7 1000 aa19.64■□□□□ 0.73
SMPD4-202ENST00000409031 CCDC197Q8NCU1 140 aa19.64■□□□□ 0.73
SMPD4-202ENST00000409031 CUL5Q93034 780 aa19.64■□□□□ 0.73
SMPD4-202ENST00000409031 WDR7Q9Y4E6 1490 aa19.64■□□□□ 0.73
SMPD4-202ENST00000409031 ANKRD65E5RJM6 399 aa19.64■□□□□ 0.73
SMPD4-202ENST00000409031 GPTP24298 496 aa19.64■□□□□ 0.73
SMPD4-202ENST00000409031 GNA11P29992 359 aa19.64■□□□□ 0.73
SMPD4-202ENST00000409031 ZNF827Q17R98 1081 aa19.64■□□□□ 0.73
SMPD4-202ENST00000409031 PHLDB2Q86SQ0 1253 aa19.64■□□□□ 0.73
SMPD4-202ENST00000409031 KCNF1Q9H3M0 494 aa19.64■□□□□ 0.73
SMPD4-202ENST00000409031 FRMD3A2A2Y4 597 aa19.63■□□□□ 0.73
SMPD4-202ENST00000409031 ERCC3P19447 782 aa19.63■□□□□ 0.73
SMPD4-202ENST00000409031 RPL13P26373 211 aaKnown RBP19.63■□□□□ 0.73
SMPD4-202ENST00000409031 NOSTRINQ8IVI9 506 aa19.63■□□□□ 0.73
SMPD4-202ENST00000409031 PANX2Q96RD6 677 aa19.63■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms