RNA–Protein interactions for RNA: ENST00000400060.8

PTPRM-203, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 5 BASIC

Gene PTPRM, Length 5,030 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-203ENST00000400060 ERCC5P28715 1186 aaPredicted RBP11.1□□□□□ -0.63
PTPRM-203ENST00000400060 ME3Q16798 604 aa11.1□□□□□ -0.63
PTPRM-203ENST00000400060 ACBD5Q5T8D3 534 aaPredicted RBP11.1□□□□□ -0.63
PTPRM-203ENST00000400060 PPP1R42Q7Z4L9 355 aa11.1□□□□□ -0.63
PTPRM-203ENST00000400060 EMILIN1Q9Y6C2 1016 aa11.1□□□□□ -0.63
PTPRM-203ENST00000400060 FSBPO95073 299 aa11.1□□□□□ -0.63
PTPRM-203ENST00000400060 CCND1P24385 295 aa11.1□□□□□ -0.63
PTPRM-203ENST00000400060 CTNNA1P35221 906 aaKnown RBP11.1□□□□□ -0.63
PTPRM-203ENST00000400060 USP14P54578 494 aa11.1□□□□□ -0.63
PTPRM-203ENST00000400060 EIF3BP55884 814 aaKnown RBP11.1□□□□□ -0.63
PTPRM-203ENST00000400060 HAUS1Q96CS2 278 aa11.1□□□□□ -0.63
PTPRM-203ENST00000400060 Q9H521 79 aa11.1□□□□□ -0.63
PTPRM-203ENST00000400060 RABEP2Q9H5N1 569 aa11.1□□□□□ -0.63
PTPRM-203ENST00000400060 KCNH3Q9ULD8 1083 aa11.1□□□□□ -0.63
PTPRM-203ENST00000400060 KIAA0232Q92628 1395 aa11.1□□□□□ -0.63
PTPRM-203ENST00000400060 POGZQ7Z3K3 1410 aa11.1□□□□□ -0.63
PTPRM-203ENST00000400060 WDR7Q9Y4E6 1490 aa11.09□□□□□ -0.63
PTPRM-203ENST00000400060 GGCXP38435 758 aa11.09□□□□□ -0.63
PTPRM-203ENST00000400060 GSCP56915 257 aaPredicted RBP11.09□□□□□ -0.63
PTPRM-203ENST00000400060 NMIQ13287 307 aaPredicted RBP11.09□□□□□ -0.63
PTPRM-203ENST00000400060 E4F1Q66K89 784 aaPredicted RBP11.09□□□□□ -0.63
PTPRM-203ENST00000400060 SAMD1Q6SPF0 538 aaPredicted RBP11.09□□□□□ -0.63
PTPRM-203ENST00000400060 ITFG2Q969R8 447 aa11.09□□□□□ -0.63
PTPRM-203ENST00000400060 RRP36Q96EU6 259 aaKnown RBP11.09□□□□□ -0.63
PTPRM-203ENST00000400060 CFAP57Q96MR6 1250 aa11.09□□□□□ -0.63
PTPRM-203ENST00000400060 RAB17Q9H0T7 212 aa11.09□□□□□ -0.63
PTPRM-203ENST00000400060 AKAP2Q9Y2D5 859 aa11.09□□□□□ -0.63
PTPRM-203ENST00000400060 GPTP24298 496 aa11.09□□□□□ -0.63
PTPRM-203ENST00000400060 PLCD1P51178 756 aa11.09□□□□□ -0.63
PTPRM-203ENST00000400060 POLE2P56282 527 aa11.09□□□□□ -0.63
PTPRM-203ENST00000400060 MCMDC2Q4G0Z9 681 aa11.09□□□□□ -0.63
PTPRM-203ENST00000400060 CCDC110Q8TBZ0 833 aa11.09□□□□□ -0.63
PTPRM-203ENST00000400060 ALG1Q9BT22 464 aa11.09□□□□□ -0.63
PTPRM-203ENST00000400060 PALD1Q9ULE6 856 aa11.09□□□□□ -0.63
PTPRM-203ENST00000400060 E9PCH4 1651 aa11.09□□□□□ -0.63
PTPRM-203ENST00000400060 TATP17735 454 aaPredicted RBP11.09□□□□□ -0.63
PTPRM-203ENST00000400060 PPP4R3AQ6IN85 833 aa11.09□□□□□ -0.63
PTPRM-203ENST00000400060 SYTL4Q96C24 671 aaPredicted RBP11.09□□□□□ -0.63
PTPRM-203ENST00000400060 FGD4Q96M96 766 aa11.09□□□□□ -0.63
PTPRM-203ENST00000400060 TRIM35Q9UPQ4 493 aa11.09□□□□□ -0.63
PTPRM-203ENST00000400060 PDE6BP35913 854 aa11.09□□□□□ -0.63
PTPRM-203ENST00000400060 USP5P45974 858 aa11.09□□□□□ -0.63
PTPRM-203ENST00000400060 METAP2P50579 478 aaKnown RBP eCLIP11.09□□□□□ -0.63
PTPRM-203ENST00000400060 ADKP55263 362 aaKnown RBP11.09□□□□□ -0.63
PTPRM-203ENST00000400060 ATP2B2Q01814 1243 aa11.09□□□□□ -0.63
PTPRM-203ENST00000400060 ACTN3Q08043 901 aaPredicted RBP11.09□□□□□ -0.63
PTPRM-203ENST00000400060 LAMB3Q13751 1172 aa11.09□□□□□ -0.63
PTPRM-203ENST00000400060 TSHZ3Q63HK5 1081 aa11.09□□□□□ -0.63
PTPRM-203ENST00000400060 YTHDF3Q7Z739 585 aaKnown RBP11.09□□□□□ -0.63
PTPRM-203ENST00000400060 OR8K1Q8NGG5 319 aa11.09□□□□□ -0.63
PTPRM-203ENST00000400060 OTUD7AQ8TE49 926 aaPredicted RBP11.09□□□□□ -0.63
PTPRM-203ENST00000400060 HVCN1Q96D96 273 aa11.09□□□□□ -0.63
PTPRM-203ENST00000400060 CCDC43Q96MW1 224 aaKnown RBP11.09□□□□□ -0.63
PTPRM-203ENST00000400060 FUCA2Q9BTY2 467 aa11.09□□□□□ -0.63
PTPRM-203ENST00000400060 TRPM1Q7Z4N2 1603 aa11.08□□□□□ -0.63
PTPRM-203ENST00000400060 SBNO2Q9Y2G9 1366 aa11.08□□□□□ -0.64
PTPRM-203ENST00000400060 GOLGA8AA7E2F4 631 aa11.08□□□□□ -0.64
PTPRM-203ENST00000400060 SEMA3EO15041 775 aa11.08□□□□□ -0.64
PTPRM-203ENST00000400060 ITIH3Q06033 890 aa11.08□□□□□ -0.64
PTPRM-203ENST00000400060 MCM10Q7L590 875 aa11.08□□□□□ -0.64
PTPRM-203ENST00000400060 SGSM3Q96HU1 749 aa11.08□□□□□ -0.64
PTPRM-203ENST00000400060 C19orf44Q9H6X5 657 aa11.08□□□□□ -0.64
PTPRM-203ENST00000400060 GGA2Q9UJY4 613 aa11.08□□□□□ -0.64
PTPRM-203ENST00000400060 PARP3Q9Y6F1 533 aa11.08□□□□□ -0.64
PTPRM-203ENST00000400060 GMNCA6NCL1 334 aa11.08□□□□□ -0.64
PTPRM-203ENST00000400060 CCDC169A6NNP5 214 aa11.08□□□□□ -0.64
PTPRM-203ENST00000400060 C21orf2O43822 256 aa11.08□□□□□ -0.64
PTPRM-203ENST00000400060 AHCYL1O43865 530 aa11.08□□□□□ -0.64
PTPRM-203ENST00000400060 SFSWAPQ12872 951 aaKnown RBP11.08□□□□□ -0.64
PTPRM-203ENST00000400060 POSTNQ15063 836 aa11.08□□□□□ -0.64
PTPRM-203ENST00000400060 KRT71Q3SY84 523 aa11.08□□□□□ -0.64
PTPRM-203ENST00000400060 VWA3BQ502W6 1294 aa11.08□□□□□ -0.64
PTPRM-203ENST00000400060 SLC40A1Q9NP59 571 aa11.08□□□□□ -0.64
PTPRM-203ENST00000400060 SRRM3A6NNA2 597 aaPredicted RBP11.08□□□□□ -0.64
PTPRM-203ENST00000400060 LIN7AO14910 233 aaPredicted RBP11.08□□□□□ -0.64
PTPRM-203ENST00000400060 KRT9P35527 623 aa11.08□□□□□ -0.64
PTPRM-203ENST00000400060 CCDC13Q8IYE1 715 aa11.08□□□□□ -0.64
PTPRM-203ENST00000400060 KLHL23Q8NBE8 558 aa11.08□□□□□ -0.64
PTPRM-203ENST00000400060 OSBPL1AQ9BXW6 950 aa11.08□□□□□ -0.64
PTPRM-203ENST00000400060 WDR93Q6P2C0 686 aa11.08□□□□□ -0.64
PTPRM-203ENST00000400060 APBB1IPQ7Z5R6 666 aaPredicted RBP11.08□□□□□ -0.64
PTPRM-203ENST00000400060 ST13P4Q8IZP2 240 aaPredicted RBP11.08□□□□□ -0.64
PTPRM-203ENST00000400060 AIDAQ96BJ3 306 aa11.08□□□□□ -0.64
PTPRM-203ENST00000400060 PPP1R1BQ9UD71 204 aaPredicted RBP11.08□□□□□ -0.64
PTPRM-203ENST00000400060 IRAK1P51617 712 aa11.07□□□□□ -0.64
PTPRM-203ENST00000400060 MAP3K21Q5TCX8 1036 aa11.07□□□□□ -0.64
PTPRM-203ENST00000400060 DHX40Q8IX18 779 aaKnown RBP11.07□□□□□ -0.64
PTPRM-203ENST00000400060 MCUR1Q96AQ8 359 aa11.07□□□□□ -0.64
PTPRM-203ENST00000400060 SLF1Q9BQI6 1058 aa11.07□□□□□ -0.64
PTPRM-203ENST00000400060 DESI2Q9BSY9 194 aa11.07□□□□□ -0.64
PTPRM-203ENST00000400060 TMED1Q13445 227 aa11.07□□□□□ -0.64
PTPRM-203ENST00000400060 RILPL1Q5EBL4 403 aa11.07□□□□□ -0.64
PTPRM-203ENST00000400060 KCNH5Q8NCM2 988 aa11.07□□□□□ -0.64
PTPRM-203ENST00000400060 MAGEC3Q8TD91 643 aa11.07□□□□□ -0.64
PTPRM-203ENST00000400060 KLHL29Q96CT2 875 aa11.07□□□□□ -0.64
PTPRM-203ENST00000400060 BOLA2Q9H3K6 86 aa11.07□□□□□ -0.64
PTPRM-203ENST00000400060 ASXL2Q76L83 1435 aa11.07□□□□□ -0.64
PTPRM-203ENST00000400060 KDM6BO15054 1643 aa11.07□□□□□ -0.64
PTPRM-203ENST00000400060 GSTTP1A0A1W2PQM5 241 aa11.07□□□□□ -0.64
PTPRM-203ENST00000400060 MACROD2A1Z1Q3 448 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms